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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, nucleus

Predictor Summary:
  • plastid 2
  • cytosol 1
  • mitochondrion 1
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3B01G451700.2 Wheat nucleus 85.16 84.8
TraesCS3D01G412200.1 Wheat peroxisome 88.3 79.87
OQU88240 Sorghum cytosol 24.54 45.87
Os01t0965700-00 Rice endoplasmic reticulum, extracellular 11.98 40.58
TraesCS3A01G514100.1 Wheat plastid 61.63 40.34
Zm00001d042003_P001 Maize plastid 39.52 35.2
KXG21396 Sorghum plastid 44.65 33.62
Zm00001d037529_P001 Maize nucleus 44.51 32.95
TraesCS2A01G085100.1 Wheat nucleus 19.69 21.43
TraesCS7A01G569600.1 Wheat nucleus, plastid 16.98 12.66
TraesCS5A01G386300.1 Wheat nucleus 23.54 12.04
TraesCS2A01G235700.1 Wheat nucleus 24.82 11.61
TraesCS7A01G002000.1 Wheat nucleus 15.83 11.28
TraesCS2A01G563500.2 Wheat nucleus 25.11 10.84
TraesCS4A01G109600.1 Wheat nucleus 20.54 10.6
TraesCS2A01G305000.1 Wheat cytosol 22.4 10.45
TraesCS4A01G498600.2 Wheat nucleus, plastid 15.69 9.51
TraesCS4A01G099600.1 Wheat cytosol 13.27 9.17
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30InterPro:Acyl_CoA_acyltransferasencoils:CoilInterPro:GNAT_dom
InterPro:IPR000182InterPro:IPR013083InterPro:IPR019787InterPro:JasPFAM:PF13673PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PFscan:PS51186PANTHER:PTHR42672PANTHER:PTHR42672:SF5SMART:SM00249
SUPFAM:SSF55729SUPFAM:SSF57903EnsemblPlantsGene:TraesCS3A01G416700EnsemblPlants:TraesCS3A01G416700.1InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHD
InterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
No Description!
Coordinates
chr3A:+:659027120..659038324
Molecular Weight (calculated)
75354.5 Da
IEP (calculated)
7.931
GRAVY (calculated)
-0.369
Length
701 amino acids
Sequence
(BLAST)
001: MREEKGDRLP KHCCSHVTPV AGRGSSFRPL SMQSNGRTPP LFSPESGRGM PPPVVYSRKQ GASADGGPSA ILRDGGGNHH ASSTDGGHGQ PVSERLLQIV
101: PANTRAGKGK NVPPAGGTAV PANGRVRKTR APKGSSTLAE SRKVPGKKSD AGEPAGMHHG TQDNDQLKTV SAPSNSRNRK STASASAVSS SRRPRRNNSS
201: TSGTAAAGAK KHTILTWLID CGVLKENEKV SYADSTSFAT KASGAVTRAG IQCTCCDATM APPAFSSHAG SEDSAPWERL LLKSGKSLLE CVREAWEGEH
301: LRILHAKQKA QAAVEKERER STQEKKRALL LAKQSRKEPA LALDLDGTNY GGDDDRSDDA CGVCADGGQL LCCDNCPSTF HPECLAVEVP EDSWVCHYCR
401: CFLCSADDDG HGGLSICHQC TRKYHHHCRA PLLAGHEIGP YCSKACNKIA VNLSNMVGAM VSIGEEGHSW SLLKFQEGSV TSDPAALLEC NAKLAVALGV
501: LNECFNPVKD RLTGIDMLHQ AVYSVESDFK RLSYQRFYTI VLEKDTEIIS VALLRFHGAK LAEMPFACTL PQYHRQGMMR LLVNAIDKVL QSVQVENLVI
601: SAVDEVVDTW KKLGFEDVEP QLRDEAKRLS MVTIAGTILL QKPTAKQDML LITEDERAFL EMSWLRCSFV DLLTGTAFPW SPYADPVAVA VRGAGGGGGE
701: A
Best Arabidopsis Sequence Match ( AT3G14980.1 )
(BLAST)
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.