Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G571900.2 | Wheat | nucleus | 92.43 | 89.99 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 90.09 | 89.32 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 84.85 | 86.67 |
| Os04t0691700-01 | Rice | nucleus | 19.34 | 79.7 |
| Zm00001d012354_P001 | Maize | cytosol | 13.55 | 69.84 |
| OQU82646 | Sorghum | nucleus | 48.89 | 58.25 |
| Zm00001d026698_P011 | Maize | nucleus | 47.17 | 57.21 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.88 | 39.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.26 | 32.67 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.7 | 28.05 |
| AT3G14980.2 | Thale cress | nucleus | 20.14 | 27.5 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 23.89 | 27.4 |
| KRH27324 | Soybean | nucleus | 21.86 | 27.08 |
| KRH21991 | Soybean | nucleus | 21.61 | 26.71 |
| CDX98519 | Canola | nucleus | 18.16 | 26.41 |
| CDX97621 | Canola | nucleus | 17.86 | 26.03 |
| Bra027290.1-P | Field mustard | nucleus | 17.73 | 25.85 |
| TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 10.84 | 25.11 |
| TraesCS2A01G305000.1 | Wheat | cytosol | 21.74 | 23.49 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 8.5 | 21.43 |
| TraesCS3A01G514100.1 | Wheat | plastid | 12.38 | 18.77 |
| TraesCS5A01G386300.1 | Wheat | nucleus | 13.92 | 16.48 |
| TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 9.11 | 15.74 |
| TraesCS2A01G235700.1 | Wheat | nucleus | 12.99 | 14.08 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 11.7 | 13.99 |
| TraesCS7A01G002000.1 | Wheat | nucleus | 7.94 | 13.11 |
| TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 8.13 | 11.41 |
| TraesCS4A01G099600.1 | Wheat | cytosol | 6.77 | 10.85 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 | PFscan:PS50016 |
| PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF15 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| EnsemblPlantsGene:TraesCS2A01G563500 | EnsemblPlants:TraesCS2A01G563500.2 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd04301 | TIGR:cd15532 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2A:-:764100530..764108452
Molecular Weight (calculated)
178224.0 Da
IEP (calculated)
6.682
GRAVY (calculated)
-0.519
Length
1624 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAEDALGFR EDDAIRFIFG EDVAARADND SGDGASAFDR SLMELRLFRE VFSRAPGQTE AAGLAGRHFG VAETSLLPGA HFAAQRPADA PRAQHGLNLK
0101: VQPPPPFRGE HIVSAPVHAG ASLGEEPRAH AHRQQNTVTV EGRLDLGVSK GHAHCYNEQQ HGTAVQEHAH CYSGQHGTAA QEEHAHRHAE QNGGIDGLAL
0201: ELDAVLQGFL GYWPGGGTSG SCNQQQVFGP AAVGIGNTVD MRMQAMAEDT VAAGAGDAVG FAGSSSTSGV DDPMPSYMDA LAEFSQFQAD PSLADPFLYQ
0301: WLQDQQPFPS DASCLSYDQG QIVDNSQALY TCSPADLSDR GDKEYPLFSK PAYDAAVPPR LSHDYVGSGQ FLELEHLPEK GTPDANTSSL DDVDVPQSSS
0401: LQSVPPVACT KRTLGRDLPD QLEAHAQCLF KDAGWTIKPR KRNDRAKMAS YFTAPHREVV LSSLTQAWKF CGNKLYEASP GSQRGKHPME WSDVDKFWKD
0501: LTDTMEYIQK VLVNQQNALT LLQRWELLDP FIAVVFIGRK ITALQQGSTV RAVDSSIIVL DDNKNMPSES KRKQKASDPL TARKVQSTPV IMGSNCGERA
0601: TESCSRSQAV PSSHVLEGGQ NRDVNLKNGY TQGQNRAIDR NENHINQSSD TQQFYSGAAL INNSVKKGRK KPKTISDVDA NELDGLYAQI FMQHTMGNLF
0701: NQESNVAMLD FSNPENTNLS GKHGIFSSVG TVKKHLKAES RPAKLNRNSQ SDKPGMLLPP ESKQMNMLKR EGTVKEPLEH TTSGPGSDAR ESGANETAPI
0801: ELAQKKLPSE SNQMIMLRGE GTVKEPTEHT ISEPYSIARE SGANETVATE IVQKQLPSES NQMSMLRGEG TVKEPTAHTI SEPDSSARES AANETVPKEM
0901: VQKKLPSEGK QSMLRGEDTA MEHKSSEPDS NARESGANEI APVEMVYQKL PSGSKKSMLR GEGIVKEPIE HTISKPDSNA RESSANGIVP SEMARKKLPS
1001: LKESSPRTPP KDSPKVSVDN AVPVELSLES NTAPLKTDLS RDSQICKTIA AKRKPEGCDK HIKKRPLELR IHDDDLLITA IVKNRDVDSY NKFAASSDFS
1101: VAKYKKLKGQ KRATKLLGKG GTNLLGGKRI SLARKTVLCW LIATGFLTVK DVIQYRNLKS NEVMKDGQVT WEGILCKCCA KTLSVSDFKA HAGCCLPKSS
1201: LGLFLQSGKS YTLCQLEAWS AELMSRRSDA CGRKVEAMDE NDDTCGFCGD GGELLCCDNC PSTYHEACLS AQELPEGSWY CHNCSCRKCG TPVSENEVSS
1301: SSDILKCLQC GDSYHGTCIN HEMLPCDDKR SNTWFCGRYC KEIFVGLHSH VGIENIIDNG LSWTILKCCS DGRRLHSARK IAHMTECNTK LAVALTLLEE
1401: CFIRMVDPRT GVDMIPHVLY NKGSNFARLD YQGFYTIILE KGDEILCVAS IRLHGTKAAE LPFIATCVDY RRKGMCRRLL DIIEKMLRSF HVEMLVLSAI
1501: PELVNTWVSG FGFKPIKDDE RKQLRNVNLM LFPGTSLLTK RLDGNITTKP EKEEGTYNVS GLTNGKCLPN GKANEHLELR DLELPEELNN EVAMNGSLRT
1601: LKREFSPAAW FNSTKVCFIS NMRL
0101: VQPPPPFRGE HIVSAPVHAG ASLGEEPRAH AHRQQNTVTV EGRLDLGVSK GHAHCYNEQQ HGTAVQEHAH CYSGQHGTAA QEEHAHRHAE QNGGIDGLAL
0201: ELDAVLQGFL GYWPGGGTSG SCNQQQVFGP AAVGIGNTVD MRMQAMAEDT VAAGAGDAVG FAGSSSTSGV DDPMPSYMDA LAEFSQFQAD PSLADPFLYQ
0301: WLQDQQPFPS DASCLSYDQG QIVDNSQALY TCSPADLSDR GDKEYPLFSK PAYDAAVPPR LSHDYVGSGQ FLELEHLPEK GTPDANTSSL DDVDVPQSSS
0401: LQSVPPVACT KRTLGRDLPD QLEAHAQCLF KDAGWTIKPR KRNDRAKMAS YFTAPHREVV LSSLTQAWKF CGNKLYEASP GSQRGKHPME WSDVDKFWKD
0501: LTDTMEYIQK VLVNQQNALT LLQRWELLDP FIAVVFIGRK ITALQQGSTV RAVDSSIIVL DDNKNMPSES KRKQKASDPL TARKVQSTPV IMGSNCGERA
0601: TESCSRSQAV PSSHVLEGGQ NRDVNLKNGY TQGQNRAIDR NENHINQSSD TQQFYSGAAL INNSVKKGRK KPKTISDVDA NELDGLYAQI FMQHTMGNLF
0701: NQESNVAMLD FSNPENTNLS GKHGIFSSVG TVKKHLKAES RPAKLNRNSQ SDKPGMLLPP ESKQMNMLKR EGTVKEPLEH TTSGPGSDAR ESGANETAPI
0801: ELAQKKLPSE SNQMIMLRGE GTVKEPTEHT ISEPYSIARE SGANETVATE IVQKQLPSES NQMSMLRGEG TVKEPTAHTI SEPDSSARES AANETVPKEM
0901: VQKKLPSEGK QSMLRGEDTA MEHKSSEPDS NARESGANEI APVEMVYQKL PSGSKKSMLR GEGIVKEPIE HTISKPDSNA RESSANGIVP SEMARKKLPS
1001: LKESSPRTPP KDSPKVSVDN AVPVELSLES NTAPLKTDLS RDSQICKTIA AKRKPEGCDK HIKKRPLELR IHDDDLLITA IVKNRDVDSY NKFAASSDFS
1101: VAKYKKLKGQ KRATKLLGKG GTNLLGGKRI SLARKTVLCW LIATGFLTVK DVIQYRNLKS NEVMKDGQVT WEGILCKCCA KTLSVSDFKA HAGCCLPKSS
1201: LGLFLQSGKS YTLCQLEAWS AELMSRRSDA CGRKVEAMDE NDDTCGFCGD GGELLCCDNC PSTYHEACLS AQELPEGSWY CHNCSCRKCG TPVSENEVSS
1301: SSDILKCLQC GDSYHGTCIN HEMLPCDDKR SNTWFCGRYC KEIFVGLHSH VGIENIIDNG LSWTILKCCS DGRRLHSARK IAHMTECNTK LAVALTLLEE
1401: CFIRMVDPRT GVDMIPHVLY NKGSNFARLD YQGFYTIILE KGDEILCVAS IRLHGTKAAE LPFIATCVDY RRKGMCRRLL DIIEKMLRSF HVEMLVLSAI
1501: PELVNTWVSG FGFKPIKDDE RKQLRNVNLM LFPGTSLLTK RLDGNITTKP EKEEGTYNVS GLTNGKCLPN GKANEHLELR DLELPEELNN EVAMNGSLRT
1601: LKREFSPAAW FNSTKVCFIS NMRL
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.