Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2D01G571900.2 | Wheat | nucleus | 91.76 | 90.11 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 89.32 | 90.09 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 84.07 | 86.6 |
| Os04t0691700-01 | Rice | nucleus | 19.17 | 79.7 |
| Zm00001d012354_P001 | Maize | cytosol | 13.55 | 70.48 |
| OQU82646 | Sorghum | nucleus | 48.9 | 58.77 |
| Zm00001d026698_P011 | Maize | nucleus | 47.13 | 57.66 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.9 | 40.21 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.21 | 32.87 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.84 | 28.48 |
| KRH27324 | Soybean | nucleus | 21.92 | 27.38 |
| AT3G14980.2 | Thale cress | nucleus | 19.84 | 27.33 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 23.44 | 27.12 |
| KRH21991 | Soybean | nucleus | 21.73 | 27.09 |
| CDX98519 | Canola | nucleus | 18.25 | 26.77 |
| CDX97621 | Canola | nucleus | 18.07 | 26.57 |
| Bra027290.1-P | Field mustard | nucleus | 17.83 | 26.21 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 22.47 | 24.45 |
| TraesCS3B01G451700.2 | Wheat | nucleus | 10.32 | 24.01 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 8.61 | 21.53 |
| TraesCS3B01G582800.1 | Wheat | nucleus | 12.21 | 18.62 |
| TraesCS5B01G391200.1 | Wheat | nucleus | 13.92 | 16.31 |
| TraesCS7B01G489100.1 | Wheat | nucleus, plastid | 9.34 | 14.64 |
| TraesCS2B01G257600.3 | Wheat | nucleus | 13.06 | 14.3 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 11.23 | 13.56 |
| TraesCS4B01G204700.1 | Wheat | cytosol | 6.72 | 10.85 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 | PFscan:PS50016 |
| PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF15 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| EnsemblPlantsGene:TraesCS2B01G622700 | EnsemblPlants:TraesCS2B01G622700.1 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd04301 | TIGR:cd15532 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2B:+:796800188..796808848
Molecular Weight (calculated)
179424.0 Da
IEP (calculated)
6.720
GRAVY (calculated)
-0.467
Length
1638 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAEDALGFR EDDAIRFIFG EDVASRADDD SAAGASAFDR SLMELRVFQE VFSRAPGQKG AAGLAGRPHF GVAETSLLPG AHFAAQRPAD APRAHAGLSL
0101: KVQPPPPFRG EHIVSAPVHA GAGLGTEAHA HAPRQQSIVT TTEGRVDLGA SNGGHAHCYN EQQRGTAVQE HAHCYNNGQH GTAAQEEHAH RHAEQNGGID
0201: GLALELDAVL QGFLGYWPGG GMAGSCNQQQ VFGAAAVSIG NTVDMRMQAM AEDNNIAAGM CEAVRFAGSS STSGVDDPMP SYMDALAEFS QFQADPSLAD
0301: PFLYQWLQDQ QPFPSDASCL SYDQGQIVDN SQALYTCSPA DLSDRGAIEY PHFSKPAYDA AAPPRLSHDY IGSGQFLELD HLPEKGTPEA NTSSLDDVDV
0401: PQSSSLQSVP PVACTKRTLG RDLPDQLEAH AQCLFKDAGW TIKPRKRNDR AKMASYFTAP HREVVLSSLT QAWKFCGNKL YEASPGSQRG KHPMEWSDVD
0501: KFWKDLTDTM EYIQKVLVNQ QSALTLLERW ELLDPFVAVV FIGRKITALQ QGSTVRAVDS SIIVLDDNKN MPSESKRKQK ASDPLTARKV QPTPVITGSD
0601: CGARAIESCS RSQAVPSCHD LEGVQNRDIN LKNGYTQGQN CGAIDRNENH INQSTETQQF YSGAALINNS VKKARKKPKM TSDVDANGLD GLYAQIFMQH
0701: SMGSVFNQDS NVAMLDFSNP GIINLPGKHG IYSSVGTVKK HLKAESRPLK LNGNSQSDKL GMLLPPESKQ MSMLNREGTV KEPLEHTTSG PGSDARESGS
0801: NETAPIELVQ KKLPSESNQM IVLRGEGTVK EPTEHTISEP YSNARESGSN ETVPTEMVQK KLPSVSNQTS MLRGEGIVNE PMAHTISEPD SSARESGANE
0901: TVPIEMVQKK LPSESKQSML RGEGTAMEHK RLKSSEPDSN ARESGASEIA PVEMVYQKLP SGSKKSMLRG EGTVKGPTEH TISKPDSNAR ELSANGTVPS
1001: EMVHKKLPSL KESSPRTPPK DPPKVSVDNA VPVELSLESN AAPLKTDLSH DSQICKTIAA KRKPQGCDKH IKKRPLELRI HDDDLLITAI VKNRDVDSYN
1101: KFAASSDFSV AKYKKLKGQK RATKLLGKGG TNLLGGKRIS LARKTVLCWL IATGFLTVKD VIQYRNLKSN EVMKDGKVTW EGILCKCCAK TLSVSDFKAH
1201: AGCCLPKSSL GLFLQSGKSY TLCQLEAWSA ELMSRRSDAC GRKVEAMDEN DDTCGFCGDG GELLCCDNCP STYHEACLSA QELPEGSWYC HNCSCRKCGT
1301: PVSENEVPSS SDILKCLQCG DAYHDTCINH EMLPCDDKRS NTWFCGRYCK EIFLGLHSHV GIENIIDNGL SWTLLKCCSD GRKLHSARKI AHMTECNTKL
1401: AVALTLLEEC FIRMVDPRTG VDMIPHVLYN KGSNFARLDY QGFYTVILEK GDEILCVASI RLHGTKAAEL PFIATCLDYR RKGMCRRLLD IIEKMLRSFH
1501: VEMLVLSAIP ELVNTWVSGF GFKPIKDDER KQLRNVNLML FPGTSLLTKR LDGNITTKPE KEEDTYNVSG LTNGKCLPNG KANEHLELRD LELPEELNNE
1601: VTMNGSLRTL KREFSPAAWF NSTKLQAHLY FYFVLIFC
0101: KVQPPPPFRG EHIVSAPVHA GAGLGTEAHA HAPRQQSIVT TTEGRVDLGA SNGGHAHCYN EQQRGTAVQE HAHCYNNGQH GTAAQEEHAH RHAEQNGGID
0201: GLALELDAVL QGFLGYWPGG GMAGSCNQQQ VFGAAAVSIG NTVDMRMQAM AEDNNIAAGM CEAVRFAGSS STSGVDDPMP SYMDALAEFS QFQADPSLAD
0301: PFLYQWLQDQ QPFPSDASCL SYDQGQIVDN SQALYTCSPA DLSDRGAIEY PHFSKPAYDA AAPPRLSHDY IGSGQFLELD HLPEKGTPEA NTSSLDDVDV
0401: PQSSSLQSVP PVACTKRTLG RDLPDQLEAH AQCLFKDAGW TIKPRKRNDR AKMASYFTAP HREVVLSSLT QAWKFCGNKL YEASPGSQRG KHPMEWSDVD
0501: KFWKDLTDTM EYIQKVLVNQ QSALTLLERW ELLDPFVAVV FIGRKITALQ QGSTVRAVDS SIIVLDDNKN MPSESKRKQK ASDPLTARKV QPTPVITGSD
0601: CGARAIESCS RSQAVPSCHD LEGVQNRDIN LKNGYTQGQN CGAIDRNENH INQSTETQQF YSGAALINNS VKKARKKPKM TSDVDANGLD GLYAQIFMQH
0701: SMGSVFNQDS NVAMLDFSNP GIINLPGKHG IYSSVGTVKK HLKAESRPLK LNGNSQSDKL GMLLPPESKQ MSMLNREGTV KEPLEHTTSG PGSDARESGS
0801: NETAPIELVQ KKLPSESNQM IVLRGEGTVK EPTEHTISEP YSNARESGSN ETVPTEMVQK KLPSVSNQTS MLRGEGIVNE PMAHTISEPD SSARESGANE
0901: TVPIEMVQKK LPSESKQSML RGEGTAMEHK RLKSSEPDSN ARESGASEIA PVEMVYQKLP SGSKKSMLRG EGTVKGPTEH TISKPDSNAR ELSANGTVPS
1001: EMVHKKLPSL KESSPRTPPK DPPKVSVDNA VPVELSLESN AAPLKTDLSH DSQICKTIAA KRKPQGCDKH IKKRPLELRI HDDDLLITAI VKNRDVDSYN
1101: KFAASSDFSV AKYKKLKGQK RATKLLGKGG TNLLGGKRIS LARKTVLCWL IATGFLTVKD VIQYRNLKSN EVMKDGKVTW EGILCKCCAK TLSVSDFKAH
1201: AGCCLPKSSL GLFLQSGKSY TLCQLEAWSA ELMSRRSDAC GRKVEAMDEN DDTCGFCGDG GELLCCDNCP STYHEACLSA QELPEGSWYC HNCSCRKCGT
1301: PVSENEVPSS SDILKCLQCG DAYHDTCINH EMLPCDDKRS NTWFCGRYCK EIFLGLHSHV GIENIIDNGL SWTLLKCCSD GRKLHSARKI AHMTECNTKL
1401: AVALTLLEEC FIRMVDPRTG VDMIPHVLYN KGSNFARLDY QGFYTVILEK GDEILCVASI RLHGTKAAEL PFIATCLDYR RKGMCRRLLD IIEKMLRSFH
1501: VEMLVLSAIP ELVNTWVSGF GFKPIKDDER KQLRNVNLML FPGTSLLTKR LDGNITTKPE KEEDTYNVSG LTNGKCLPNG KANEHLELRD LELPEELNNE
1601: VTMNGSLRTL KREFSPAAWF NSTKLQAHLY FYFVLIFC
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSNKHLDA RDEKGSALHG FPTSDIARET IPLHLVESSN KGVSTSSYLL
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.