Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os04t0691700-01 | Rice | nucleus | 13.6 | 34.77 |
| PGSC0003DMT400032367 | Potato | nucleus | 14.5 | 30.1 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 28.2 | 29.99 |
| KXG24184 | Sorghum | nucleus | 27.9 | 27.52 |
| Zm00001d012354_P001 | Maize | cytosol | 8.44 | 26.98 |
| Solyc07g062600.2.1 | Tomato | nucleus | 28.7 | 25.33 |
| AT3G14980.2 | Thale cress | nucleus | 29.49 | 24.98 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 34.66 | 24.65 |
| KRH27324 | Soybean | nucleus | 31.78 | 24.41 |
| KRH21991 | Soybean | nucleus | 31.48 | 24.12 |
| Zm00001d026698_P011 | Maize | nucleus | 31.98 | 24.05 |
| CDX98519 | Canola | nucleus | 26.51 | 23.9 |
| Bra027290.1-P | Field mustard | nucleus | 26.42 | 23.88 |
| OQU82646 | Sorghum | nucleus | 32.17 | 23.77 |
| CDX97621 | Canola | nucleus | 26.22 | 23.7 |
| GSMUA_Achr4P21300_001 | Banana | nucleus | 17.18 | 21.12 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 32.67 | 20.26 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 32.87 | 20.21 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 31.68 | 20.06 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 33.17 | 20.02 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.41 | 14.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 10.33 | 12.76 |
| GSMUA_Achr5P02880_001 | Banana | nucleus | 18.37 | 12.59 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 13.01 | 12.36 |
| GSMUA_Achr4P12040_001 | Banana | nucleus | 9.93 | 11.43 |
| GSMUA_Achr6P33300_001 | Banana | plastid | 6.85 | 10.44 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, golgi | 2.38 | 7.72 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 |
| EnsemblPlantsGene:GSMUA_AchrUn_randomG11680_001 | EnsemblPlants:GSMUA_AchrUn_randomP11680_001 | EnsemblPlants:GSMUA_AchrUn_randomT11680_001 | InterPro:IDM1 | InterPro:IPR013083 | InterPro:IPR019787 |
| InterPro:Jas | UniProt:M0U8C7 | PFAM:PF16135 | PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 |
| SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0002952D3D | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11680_001]
Coordinates
chrchrUn_random:+:56444321..56458337
Molecular Weight (calculated)
111886.0 Da
IEP (calculated)
6.800
GRAVY (calculated)
-0.408
Length
1007 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLFGQGMDRM DRDGFDGSKQ EHHIFMEVFS VTSVDTASNH NIALNTMDLQ KDEGSQSKLV ESSNCESSVL TSSFSTKDSS GEASQPACVY ARQVSGSRCF
0101: ADISSCCGVA DPYDADIKCM KVSSIEQQNH KSVMQSYSLS VTGDDLLDLD RLQNSSSMLM QRQQQSPCLV IETCSHDILS SCYLSKTNKE IDGSDDMDDG
0201: NALDIECKSQ DIRDDKIIIE AKSVTSPVSQ ESFASGLLVV NAAAAPAETP GVPIHMKHIV EESSILNSGS TDVASKRALI RELPERLRLH TNRLLTDAGW
0301: KIEPRVRSDR TKLASYYIAP KEKLVVTSLS QAWKACGRRL YSSAMDSELE DNGREWTNID RFWSDLTDTL FYVEENTQST KISISLLKRW QLLDPFVAVV
0401: CINRKVGVLR EGKSLKAVSS ATFILSEDVD ERLATQPSDL IPGCEDGLLA SNIHSDIITE KVAIKASESK DQNFSVNQVS DSGKKVHKKS KKISEIRASK
0501: VDGTNDEKSM EALNFRFDDR SNDYTETQCN QEDSQTLAFE STLGCMKENT CATVEDCSNV KKKMVKSESK APRQHLKGRK GKFAMSLVNK EAIVAPDDGN
0601: TSTGGKTINA EVLCSDNPTE ENKKLSKPKV PEACKKRKWK RPRGFRINDD DLLIAAIIKN KDYISYGKGI NLGARSVLCW LIDRGVLSLK DVLQYRNPKN
0701: NALVKDGWIT RDGILCKCCM EIFSVSAFKA HSGSKFQKPS SNLFLQSGRS YTLCQLQAWS ADYKARKGRK RDMRVEEVDQ NDDTCGLCID GGELICCDNC
0801: PSTYHQTCLT IQVLPEGSWY CHNCICKSCG DVVDATTSSS FAVLECSQCE HKYHGTCVKK RNLGSGEVES GTWFCGKKCK EVYLGLRSHV GILNCLADGF
0901: SWTILRCNHD DQKINSTQKI ALMAECNTKL AIALSIMEEC FLPMVDPRTH IDMIPHVLYN RGSNFTRLNY QGFYTVVLEK SDEVISVASI RYVANSFASL
1001: KTFSCRL
0101: ADISSCCGVA DPYDADIKCM KVSSIEQQNH KSVMQSYSLS VTGDDLLDLD RLQNSSSMLM QRQQQSPCLV IETCSHDILS SCYLSKTNKE IDGSDDMDDG
0201: NALDIECKSQ DIRDDKIIIE AKSVTSPVSQ ESFASGLLVV NAAAAPAETP GVPIHMKHIV EESSILNSGS TDVASKRALI RELPERLRLH TNRLLTDAGW
0301: KIEPRVRSDR TKLASYYIAP KEKLVVTSLS QAWKACGRRL YSSAMDSELE DNGREWTNID RFWSDLTDTL FYVEENTQST KISISLLKRW QLLDPFVAVV
0401: CINRKVGVLR EGKSLKAVSS ATFILSEDVD ERLATQPSDL IPGCEDGLLA SNIHSDIITE KVAIKASESK DQNFSVNQVS DSGKKVHKKS KKISEIRASK
0501: VDGTNDEKSM EALNFRFDDR SNDYTETQCN QEDSQTLAFE STLGCMKENT CATVEDCSNV KKKMVKSESK APRQHLKGRK GKFAMSLVNK EAIVAPDDGN
0601: TSTGGKTINA EVLCSDNPTE ENKKLSKPKV PEACKKRKWK RPRGFRINDD DLLIAAIIKN KDYISYGKGI NLGARSVLCW LIDRGVLSLK DVLQYRNPKN
0701: NALVKDGWIT RDGILCKCCM EIFSVSAFKA HSGSKFQKPS SNLFLQSGRS YTLCQLQAWS ADYKARKGRK RDMRVEEVDQ NDDTCGLCID GGELICCDNC
0801: PSTYHQTCLT IQVLPEGSWY CHNCICKSCG DVVDATTSSS FAVLECSQCE HKYHGTCVKK RNLGSGEVES GTWFCGKKCK EVYLGLRSHV GILNCLADGF
0901: SWTILRCNHD DQKINSTQKI ALMAECNTKL AIALSIMEEC FLPMVDPRTH IDMIPHVLYN RGSNFTRLNY QGFYTVVLEK SDEVISVASI RYVANSFASL
1001: KTFSCRL
001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRLV
101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRLV
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.