Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, golgi
Predictor Summary:
Predictor Summary:
- nucleus 3
- extracellular 3
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 3
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 16.08 | 6.13 |
| GSMUA_Achr6P33300_001 | Banana | plastid | 10.93 | 5.14 |
| GSMUA_Achr4P12040_001 | Banana | nucleus | 13.18 | 4.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 11.25 | 3.64 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 10.29 | 3.38 |
| GSMUA_Achr4P21300_001 | Banana | nucleus | 8.36 | 3.17 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 8.68 | 2.55 |
| GSMUA_AchrUn_... | Banana | nucleus | 7.72 | 2.38 |
| GSMUA_Achr5P02880_001 | Banana | nucleus | 8.68 | 1.84 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP11690_001 | EnsemblPlants:GSMUA_AchrUn_randomT11690_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG11690_001 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF15 | SignalP:SignalP-TM | SUPFAM:SSF55729 | UniParc:UPI000295B87E | UniProt:M0U8C8 | MapMan:15.5.30 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG11690_001]
Coordinates
chrchrUn_random:+:56458408..56461017
Molecular Weight (calculated)
34775.8 Da
IEP (calculated)
4.353
GRAVY (calculated)
-0.402
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MCLMVLFCLT RIHGVTVAEM PLIATCSEYR RQGMCRRLID AIEKMLKSFG VKMLVISAIP ILVETWTSHF GFKPIEDVER RQLNHVNLML FPGTALLIKQ
101: LEEPTTEESG SKSDVCLKGY QSVNPDGSNE VTNITTEVQA DRTARTDSDD EALLPTADVT YQMEQEHDWQ QKDLLVSSYD TLNSIAKPND NDANISEPFR
201: RKIANLDIDK KSQFDSAEHT EQEIFTSLSV VSKSTALHSC SGSRIICATD DRYFAESVPI NDGESEKVDM ISEAEAKNIL EEDNRLFSEG DGIEQDITNH
301: SSEAKCSSFD G
101: LEEPTTEESG SKSDVCLKGY QSVNPDGSNE VTNITTEVQA DRTARTDSDD EALLPTADVT YQMEQEHDWQ QKDLLVSSYD TLNSIAKPND NDANISEPFR
201: RKIANLDIDK KSQFDSAEHT EQEIFTSLSV VSKSTALHSC SGSRIICATD DRYFAESVPI NDGESEKVDM ISEAEAKNIL EEDNRLFSEG DGIEQDITNH
301: SSEAKCSSFD G
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSNKHLDA RDEKGSALHG FPTSDIARET IPLHLVESSN KGVSTSSYLL
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
0101: KHSIVKGREV YLGGIVSGKC KSLNLDKCDG KEFKAIASPV SQESFATRMI SVGASTPHSE KACFPLQLNN GSKVSPNELI MSKTCLKIDP KEDPRPLLYK
0201: YVCKVLTAAR WKIEKRERSA GRKHVDTFYI SPEGRKFREF GSAWKALGGI LLADRKLMDT GTKKWTGIND FWSDLSLTLL DIEENMKNLN LANTRALWWS
0301: ALEPFVVVVF ISKQVGSLRK GNKVEVARNS NPDKLKKEDT ICLNLISGCP ESVLTVSEGS HLVHDVDANQ EIHSDLEVQT KISSQKVSSR LERQSIIGKE
0401: ISGTHEQEAS KGIVASKLIA EDMHESVMRK NLHRRSKKIS DIKPASLDQH DSLDSNSLNS FEFQDKEMGN IHLVSKGSRD ERLRNEKMNN SCCNSKKGRK
0501: KARKHYTQDD DLMGSTITRN KGKFSRSSQK KKTQKPKART KKRNNRGGCR LLPRSSSNVE NHFFQGNWSI LGPRTVLSWL IATKVISRDE VIQLRDPDDD
0601: TVVKTGLVTK DGVVCTCCNK TVSLSEFKNH AGFNQNCPCL NLFMGSGKPF ASCQLEAWSA EYKARRNGWR LEKASDDDPN DDSCGVCGDG GELICCDNCP
0701: STFHQACLSM QVLPEGSWYC SSCTCWICSE LVSDNAERSQ DFKCSQCAHK YHGTCLQGIS KRRKLFPETY FCGKNCEKVY NGLSSRVGII NPNADGLSWS
0801: ILKCFQEDGM VHSARRLALK AECNSKLAVA LSIMEESFLS MVDPRTGIDM IPHVLYNWGS TFARLDFDGF YTVVVEKDDV MISVASIRVH GVTIAEMPLV
0901: ATCSKYRRQG MCRILVAAIE EMLMSLKVEK LVVAALPSLV ETWTEGFGFK PMDDEERDAL KRINLMVFPG TTLLKKTLYE STKPSTMKGV CLSKERNNPS
1001: NKEADLEPGL DKAGSPMSTQ VESCDQMVPA GSDDEPSPGF PVPLGADQTE PTSETENPSR DSNANDRPNK TTVVSIGEEE EEECLQKDVS KLSEEGKETT
1101: RASSSSAALE EVSGLGLGVV NNVSDEMLLC VDEQLDSDSS QDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.