Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d008232_P001 | Maize | cytosol | 13.11 | 43.44 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 7.08 | 41.44 |
| GSMUA_AchrUn_... | Banana | nucleus | 32.83 | 36.17 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 20.75 | 34.16 |
| KRH30259 | Soybean | nucleus | 29.43 | 32.95 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 20.0 | 32.82 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 21.7 | 32.53 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 20.09 | 32.52 |
| Zm00001d022583_P001 | Maize | nucleus | 21.13 | 32.0 |
| Zm00001d028749_P002 | Maize | mitochondrion | 38.21 | 31.81 |
| CDX73252 | Canola | cytosol | 5.75 | 31.61 |
| KRH72700 | Soybean | nucleus | 32.08 | 30.94 |
| KRH30263 | Soybean | nucleus | 33.68 | 30.78 |
| KXG39596 | Sorghum | plasma membrane | 36.23 | 30.52 |
| KRH17051 | Soybean | nucleus | 30.0 | 30.14 |
| AT5G58610.3 | Thale cress | nucleus | 31.13 | 30.14 |
| OQU90556 | Sorghum | mitochondrion | 22.45 | 29.97 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 33.3 | 29.66 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 37.55 | 29.33 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 37.45 | 29.23 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 37.26 | 29.11 |
| KRH52096 | Soybean | nucleus | 16.23 | 28.48 |
| PGSC0003DMT400056776 | Potato | nucleus | 32.64 | 28.43 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 7.55 | 28.07 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 7.55 | 28.07 |
| Solyc09g031580.2.1 | Tomato | nucleus | 31.98 | 27.95 |
| PGSC0003DMT400043562 | Potato | nucleus | 23.87 | 27.53 |
| AT5G63900.1 | Thale cress | nucleus | 14.25 | 27.11 |
| Solyc03g071550.1.1 | Tomato | nucleus | 24.15 | 26.58 |
| CDX84460 | Canola | nucleus | 11.51 | 26.58 |
| Bra024246.1-P | Field mustard | nucleus | 11.51 | 25.9 |
| CDY43768 | Canola | nucleus | 11.51 | 25.9 |
| CDX81205 | Canola | nucleus | 13.21 | 25.59 |
| CDY60050 | Canola | nucleus | 13.4 | 25.45 |
| Solyc06g082050.1.1 | Tomato | nucleus | 8.02 | 25.0 |
| Bra037758.1-P | Field mustard | nucleus | 13.4 | 24.65 |
| CDY52116 | Canola | nucleus | 30.19 | 22.39 |
| GSMUA_Achr4P21300_001 | Banana | nucleus | 15.94 | 20.63 |
| CDX80351 | Canola | golgi, plasma membrane | 16.89 | 17.83 |
| GSMUA_AchrUn_... | Banana | nucleus | 13.02 | 16.93 |
| GSMUA_Achr4P12040_001 | Banana | nucleus | 13.68 | 16.57 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 13.96 | 15.63 |
| GSMUA_Achr6P33300_001 | Banana | plastid | 9.62 | 15.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 12.36 | 13.01 |
| GSMUA_Achr5P02880_001 | Banana | nucleus | 17.36 | 12.52 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, golgi | 2.55 | 8.68 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:GSMUA_Achr6G32880_001 | EnsemblPlants:GSMUA_Achr6P32880_001 | EnsemblPlants:GSMUA_Achr6T32880_001 |
| InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:M0TC82 | PFAM:PF00628 | PFAM:PF05641 |
| PFAM:PF16135 | PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | SMART:SM00249 | SMART:SM00743 |
| SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI000294C8B4 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : | : |
Description
Putative uncharacterized protein Sb01g038485 (Fragment) [Source:GMGC_GENE;Acc:GSMUA_Achr6G32880_001]
Coordinates
chr6:-:32087365..32100950
Molecular Weight (calculated)
119616.0 Da
IEP (calculated)
7.132
GRAVY (calculated)
-0.315
Length
1060 amino acids
Sequence
(BLAST)
(BLAST)
0001: MAIDDEPTRK RRRKKLMTGE AVEVGHFHEG LQSWHLAVVI ECGEFFRVVE HANRLSGDRI SEPEEVIPVS DAIEGTFSTA TESCRPRIRP VPPHVSIGNS
0101: EIRYGLCVDA LVDDAWWEGV VFDHDEGFEE RRVLFPDLGD QAILTIERLR LTQDWDEASG HWKPRGQWLF LQLLQNFDCA GSLPVSIRQI WCNLRATHVF
0201: QDKIKSWAFG TKDIWEKLLS ELIEEVWSAA NTISVSDNSS QAVLVVDATE VSGADGFLQS CDSTKASMKP RVCSKALQDF IQVCRNKFCP IDLKKKLYVL
0301: RTFSILTSMH SKAENIPSCS VANNWKPLKL DASYCPGLVE VYASKMRGGK SRLKSLAKLD CKSLSEKVKK HLVALGWTVE FREDAILRFR FSSPQGRIYY
0401: SLIKACSDLL HQKVDEECEY SDDSEHDRSG CSTKRLHSIV DYRVNCSGRS FNCAASGNKK VEFRADEDIE PEYLPEAITE YEGFMDLQVQ NESTFSCNSS
0501: EFGERKFGRL RFKRVANLKK KSMPLSPSHG STQTCLSGQE ADCQKSKRRV ASQSIKQDEK TGESFSSRVR RSSTSLQQLV ESSSQHSAKT VLSWLIDNDI
0601: LLPRQKVYCM CEKDRQSRKE GRINHSGIKC MCCKTVFDLA SFAAHSDNRT QRPSATIFLS DGRSLLQCQM QMMHASKQKN FPHIRLKGDL TQHQSDTICS
0701: ICQDGGALIL CDHCPSAFHV TCMGLEDVPE GKWFCPSCRC GICDHSEYNH DVEQFTKTTM FSCDQCEGEY HVGCLRGERL QQLGSCPNGN WFCSKKCLKY
0801: SINDNSDLGR FALEAMAEHH SKLCIALDVL HECFVPMTET RTQSDLVADL LFNKESELKR LNFWGFYTML LEKGDELVSV ATFRVYGDKA AEMPLIGTRV
0901: LYRRKGMCRL LVNELEKLLC SLGVERLLLP AVPQLLQTWT TSFGFTQMTS SDRLELSKYS LLSFSGTTMC QKLLGAAKTV SGVPAGDLPF SNFSVINNSV
1001: INITIVMVTN TCTKLHIHMI HIWRFTSTDD FCIELADGSD CDSSVILSTC CRHKTPQILP
0101: EIRYGLCVDA LVDDAWWEGV VFDHDEGFEE RRVLFPDLGD QAILTIERLR LTQDWDEASG HWKPRGQWLF LQLLQNFDCA GSLPVSIRQI WCNLRATHVF
0201: QDKIKSWAFG TKDIWEKLLS ELIEEVWSAA NTISVSDNSS QAVLVVDATE VSGADGFLQS CDSTKASMKP RVCSKALQDF IQVCRNKFCP IDLKKKLYVL
0301: RTFSILTSMH SKAENIPSCS VANNWKPLKL DASYCPGLVE VYASKMRGGK SRLKSLAKLD CKSLSEKVKK HLVALGWTVE FREDAILRFR FSSPQGRIYY
0401: SLIKACSDLL HQKVDEECEY SDDSEHDRSG CSTKRLHSIV DYRVNCSGRS FNCAASGNKK VEFRADEDIE PEYLPEAITE YEGFMDLQVQ NESTFSCNSS
0501: EFGERKFGRL RFKRVANLKK KSMPLSPSHG STQTCLSGQE ADCQKSKRRV ASQSIKQDEK TGESFSSRVR RSSTSLQQLV ESSSQHSAKT VLSWLIDNDI
0601: LLPRQKVYCM CEKDRQSRKE GRINHSGIKC MCCKTVFDLA SFAAHSDNRT QRPSATIFLS DGRSLLQCQM QMMHASKQKN FPHIRLKGDL TQHQSDTICS
0701: ICQDGGALIL CDHCPSAFHV TCMGLEDVPE GKWFCPSCRC GICDHSEYNH DVEQFTKTTM FSCDQCEGEY HVGCLRGERL QQLGSCPNGN WFCSKKCLKY
0801: SINDNSDLGR FALEAMAEHH SKLCIALDVL HECFVPMTET RTQSDLVADL LFNKESELKR LNFWGFYTML LEKGDELVSV ATFRVYGDKA AEMPLIGTRV
0901: LYRRKGMCRL LVNELEKLLC SLGVERLLLP AVPQLLQTWT TSFGFTQMTS SDRLELSKYS LLSFSGTTMC QKLLGAAKTV SGVPAGDLPF SNFSVINNSV
1001: INITIVMVTN TCTKLHIHMI HIWRFTSTDD FCIELADGSD CDSSVILSTC CRHKTPQILP
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.