Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4B01G194600.1 | Wheat | nucleus | 97.72 | 97.72 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 96.09 | 96.02 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 11.57 | 86.74 |
| Zm00001d028749_P002 | Maize | mitochondrion | 56.01 | 59.7 |
| KXG39596 | Sorghum | plasma membrane | 54.83 | 59.14 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 20.34 | 42.72 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 29.11 | 37.26 |
| CDX73252 | Canola | cytosol | 5.16 | 36.27 |
| KRH30259 | Soybean | nucleus | 24.24 | 34.74 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 17.76 | 34.09 |
| KRH30263 | Soybean | nucleus | 26.9 | 31.47 |
| KRH52096 | Soybean | nucleus | 14.0 | 31.46 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 26.82 | 30.59 |
| KRH72700 | Soybean | nucleus | 24.61 | 30.39 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 6.34 | 30.18 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 6.34 | 30.18 |
| AT5G58610.3 | Thale cress | nucleus | 24.32 | 30.14 |
| KRH17051 | Soybean | nucleus | 23.36 | 30.05 |
| CDX84460 | Canola | nucleus | 10.1 | 29.85 |
| PGSC0003DMT400056776 | Potato | nucleus | 26.38 | 29.42 |
| CDY43768 | Canola | nucleus | 10.17 | 29.3 |
| Bra024246.1-P | Field mustard | nucleus | 10.17 | 29.3 |
| Solyc09g031580.2.1 | Tomato | nucleus | 26.09 | 29.18 |
| CDY60050 | Canola | nucleus | 11.86 | 28.85 |
| CDX81205 | Canola | nucleus | 11.57 | 28.7 |
| PGSC0003DMT400043562 | Potato | nucleus | 19.09 | 28.18 |
| Solyc03g071550.1.1 | Tomato | nucleus | 19.9 | 28.04 |
| Bra037758.1-P | Field mustard | nucleus | 11.64 | 27.43 |
| AT5G63900.1 | Thale cress | nucleus | 11.13 | 27.11 |
| CDY52116 | Canola | nucleus | 24.24 | 23.02 |
| Solyc06g082050.1.1 | Tomato | nucleus | 5.67 | 22.65 |
| CDX80351 | Canola | golgi, plasma membrane | 14.74 | 19.92 |
| TraesCS3D01G412200.1 | Wheat | peroxisome | 10.69 | 18.71 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 12.82 | 15.7 |
| TraesCS5D01G396100.1 | Wheat | nucleus | 14.08 | 13.93 |
| TraesCS2D01G238100.1 | Wheat | nucleus | 14.59 | 13.22 |
| TraesCS4D01G205600.2 | Wheat | cytosol | 8.99 | 11.95 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 13.41 | 11.33 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 13.85 | 11.27 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant |
| InterPro:GNAT_dom | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF00628 |
| PFAM:PF05641 | PFAM:PF16135 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF9 | SMART:SM00249 | SMART:SM00743 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS4D01G195300 |
| EnsemblPlants:TraesCS4D01G195300.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd04301 | TIGR:cd15567 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4D:-:339034786..339042154
Molecular Weight (calculated)
151161.0 Da
IEP (calculated)
7.029
GRAVY (calculated)
-0.426
Length
1357 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPRGAAKRRR EPSPVAAAGE RKLLPGEHVE VISFDPGLCG SWHQAVVIEI LDNFRSVRYT DFVDDNGSGS PLVEQVEVSD AIDGKSSAAR GSTRGKVRPV
0101: HPHQPLQVSD ASYALWVDAL VEGSYWEGVI ADHAQGSMER KVFFPDEGDE RIMAVDQLRR TQDWDEVTGT WKPRGIWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT TEDNTWMCGT ESFWEGSLAA LIAELRSVCD KPTQDGNQIG DSCRSAETST SAAFQNKNVE PIVSGKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARARRESA KHHLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHTNNL LLHSVTRNNE DCSSIGTDLI LRENKHHNKL STDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN DTMRMKLKEH LLALGWSIVV KEDDIIRPNG QPSTIKRYRY KSPAGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEDIPDNCNH LAAHRLNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKL LRSKAKKFLK SAGWIVCQKM KSSKKRELRY HSPHGKSYKC
0601: LLAACKGYLE QGYQKENNAS SGVTTDTFIA LGGGATDTSG RKDLLVSVLD RHDGTFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGTV TKDGIKCMCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLH VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCNIC DLSDYDPDIN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFHHL QELIGKSIPT PVEGLSCTIL RFDRENASNH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQYRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SCSQRFELAE SSILSFQGTT
1101: ICQKILDATD HNPRDMSIQL VLNAEEIELG KNSIVSFERT TACDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELKVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQKVSSNAFS HPEELNGSDY QLECTSIVPE TLESDSQEST SVGVEDRDQP EPELILEIRS NSSEEGNCAV GVPIITPNPE VNFTVDSHGQ
1301: PYDSVGADQC SGSCVSTEVK PVAAAPGSKY KGKCYERNRW SNGRRKLEMH GYGVSTK
0101: HPHQPLQVSD ASYALWVDAL VEGSYWEGVI ADHAQGSMER KVFFPDEGDE RIMAVDQLRR TQDWDEVTGT WKPRGIWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT TEDNTWMCGT ESFWEGSLAA LIAELRSVCD KPTQDGNQIG DSCRSAETST SAAFQNKNVE PIVSGKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARARRESA KHHLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHTNNL LLHSVTRNNE DCSSIGTDLI LRENKHHNKL STDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN DTMRMKLKEH LLALGWSIVV KEDDIIRPNG QPSTIKRYRY KSPAGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEDIPDNCNH LAAHRLNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKL LRSKAKKFLK SAGWIVCQKM KSSKKRELRY HSPHGKSYKC
0601: LLAACKGYLE QGYQKENNAS SGVTTDTFIA LGGGATDTSG RKDLLVSVLD RHDGTFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGTV TKDGIKCMCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLH VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCNIC DLSDYDPDIN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFHHL QELIGKSIPT PVEGLSCTIL RFDRENASNH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQYRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SCSQRFELAE SSILSFQGTT
1101: ICQKILDATD HNPRDMSIQL VLNAEEIELG KNSIVSFERT TACDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELKVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQKVSSNAFS HPEELNGSDY QLECTSIVPE TLESDSQEST SVGVEDRDQP EPELILEIRS NSSEEGNCAV GVPIITPNPE VNFTVDSHGQ
1301: PYDSVGADQC SGSCVSTEVK PVAAAPGSKY KGKCYERNRW SNGRRKLEMH GYGVSTK
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.