Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G563500.2 | Wheat | nucleus | 89.99 | 92.43 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 90.11 | 91.76 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 84.35 | 88.49 |
| Os04t0691700-01 | Rice | nucleus | 19.0 | 80.46 |
| Zm00001d012354_P001 | Maize | cytosol | 13.37 | 70.79 |
| OQU82646 | Sorghum | nucleus | 47.9 | 58.62 |
| Zm00001d026698_P011 | Maize | nucleus | 46.34 | 57.73 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.57 | 39.79 |
| GSMUA_AchrUn_... | Banana | nucleus | 20.02 | 33.17 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.48 | 28.48 |
| AT3G14980.2 | Thale cress | nucleus | 19.78 | 27.75 |
| KRH27324 | Soybean | nucleus | 21.46 | 27.31 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 23.08 | 27.19 |
| KRH21991 | Soybean | nucleus | 21.28 | 27.02 |
| CDX98519 | Canola | nucleus | 17.93 | 26.77 |
| CDX97621 | Canola | nucleus | 17.75 | 26.57 |
| Bra027290.1-P | Field mustard | nucleus | 17.57 | 26.3 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 22.12 | 22.96 |
| TraesCS3D01G412200.1 | Wheat | peroxisome | 10.25 | 22.06 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 8.39 | 21.67 |
| TraesCS5D01G396100.1 | Wheat | nucleus | 13.67 | 16.63 |
| TraesCS2D01G238100.1 | Wheat | nucleus | 12.71 | 14.15 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 11.27 | 13.85 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 9.11 | 13.72 |
| TraesCS4D01G205600.2 | Wheat | cytosol | 6.47 | 10.58 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | ncoils:Coil |
| InterPro:GNAT_dom | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 |
| PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF15 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2D01G571900 | EnsemblPlants:TraesCS2D01G571900.2 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | TIGR:cd04301 | TIGR:cd15532 | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2D:+:638131020..638139662
Molecular Weight (calculated)
183161.0 Da
IEP (calculated)
6.621
GRAVY (calculated)
-0.488
Length
1668 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDAEEALGFR EDDAIRFIFG EDVASRADDD CPDSAASAFD RSLMELRLFQ EVFARAPGHK EAAGLAGRHF GVAETSLLPG AHFAAQRPAD APRAQPRLNL
0101: KVQPPPPFRG EHIVSAPVHA GAGLSLEARP HAHQQQNNVT IEGKVDLGVS KGHAHCYGEQ HEIAVQEHAH CYNGHQEEHA HRHVEQNGGI DGLALELDAV
0201: LQGFLGYWPG GATAGSCDQQ QVFGAAAVGI GNTVDMRMQA MAEDNNIAAG TCEAVGFAGS SSTSGVDDPM PSYMDALAEF SQFQADPSLA DPFLYQWLQD
0301: QQPFPSDASC LSYDQGQIVD NGQALYTCSP ADLSDRGAKE YPHFSKPAYD AAVPPRLSHD YVGSGQFLEL EQHLEKGTPD ANTSSLDDVD VPQSSSLQSI
0401: PPVACTKRTL GRDLPDQLEA HAQCLFKDAG WTIKPRKRND RAKMASYFTA PHREVVLSSL TQAWKFCGNK LYEASPGSQR GKHPMEWSDV DKFWKDLTDT
0501: MEYIQKVLVN QQNALTLLER WELLDPFIAV VFIGRKITAL QQGSTVRAVD SSIIVLDDNK NMPSESKRKQ KASDPLTARK VQSTPVIMGS DCGERVVESC
0601: SRSQAVPSCH VLEGGQNRDI NLKNGYTQGQ NRAIDRNENH IDQSTETQQF YSGAALINNS VKKARKKPKM IPDVDANGLD GLYAQIFMQH TMGNVFNQES
0701: NVAMLDFSNP GNINVSGKHG IYSSVGTVKK DLKAESRPAK LNRNSQTDKP GMLLPPESKQ MSMLMREGTV KEPLEHTTSG PDSDARESGA KETAPIEWVQ
0801: KKLPSESNQM IMLRGEGTVK DPTEHTISEP YSNARESGAN EIAPVEMVQK KLPSGSNQMS MLRGEGIVKE PMVHIISEPD SSARESGANE TVPTEMVQKL
0901: PSESNQMSML RGEGTVKEPT AHTISEPASS ARKSGAKETV PIEMVQKKLP SESKQSMLRG EGTAMEHKRL KSAEPDSNAR ESGANEIAPV EVVYQKLPSG
1001: SKKSMLRGEG TVKEPTEHTI SKSDFNAREL SANGIVPSEM VHKKLPSLKE SSPRTPPKDP PKVSVDNAVP VELSLESNAA PLKTDLSRDS QICKTIAAKR
1101: KPQGCDKHIK KRPLELRIHD DDLLITAIVK NRDVDSYNKF AASSDFSVAK YKKLKGQKRA TKLLGKGGTN LLGGKRISLA RKTVLCWLIA TGFLTVKDVI
1201: QYRNLKSNEV VKDGQVTWEG ILCKCCAKTL SVSDFKAHAG CCLPKSSLGL FLQSGKSYTL CQLEAWSAEL MSRRSDACGR KVEAMDENDD TCGFCGDGGE
1301: LLCCDNCPST YHEACLSAQE LPEGSWYCHN CSCRKCGTPV SENEVPSSSD ILKCLQCGDA YHGTCINHEM LPCDDKRSNT WFCGRYCKEI FLGLHSHVGI
1401: ENIIDNGLSW TILKCCSDGR RLHSARKIAH MTECNTKLAV ALTLLEECFI RMVDPRTGVD MIPHVLYNKG SNFARLDYQG FYTVILEKGD EILCVASIRL
1501: HGTKAAELPF IATCVDYRRK GMCRRLLDII EKMLRSFHVE MLVLSAIPEL VNTWVSGFGF KPIKDDERKQ LRNVNLMLFP GTSLLTKRLD GNITTKPEKE
1601: EGTHNVSGLT NGKCLPDGKA NEHLELRDLE LPEELNNEVA MNGSLRTLKR EFSPAAWFNS TKLAVGEV
0101: KVQPPPPFRG EHIVSAPVHA GAGLSLEARP HAHQQQNNVT IEGKVDLGVS KGHAHCYGEQ HEIAVQEHAH CYNGHQEEHA HRHVEQNGGI DGLALELDAV
0201: LQGFLGYWPG GATAGSCDQQ QVFGAAAVGI GNTVDMRMQA MAEDNNIAAG TCEAVGFAGS SSTSGVDDPM PSYMDALAEF SQFQADPSLA DPFLYQWLQD
0301: QQPFPSDASC LSYDQGQIVD NGQALYTCSP ADLSDRGAKE YPHFSKPAYD AAVPPRLSHD YVGSGQFLEL EQHLEKGTPD ANTSSLDDVD VPQSSSLQSI
0401: PPVACTKRTL GRDLPDQLEA HAQCLFKDAG WTIKPRKRND RAKMASYFTA PHREVVLSSL TQAWKFCGNK LYEASPGSQR GKHPMEWSDV DKFWKDLTDT
0501: MEYIQKVLVN QQNALTLLER WELLDPFIAV VFIGRKITAL QQGSTVRAVD SSIIVLDDNK NMPSESKRKQ KASDPLTARK VQSTPVIMGS DCGERVVESC
0601: SRSQAVPSCH VLEGGQNRDI NLKNGYTQGQ NRAIDRNENH IDQSTETQQF YSGAALINNS VKKARKKPKM IPDVDANGLD GLYAQIFMQH TMGNVFNQES
0701: NVAMLDFSNP GNINVSGKHG IYSSVGTVKK DLKAESRPAK LNRNSQTDKP GMLLPPESKQ MSMLMREGTV KEPLEHTTSG PDSDARESGA KETAPIEWVQ
0801: KKLPSESNQM IMLRGEGTVK DPTEHTISEP YSNARESGAN EIAPVEMVQK KLPSGSNQMS MLRGEGIVKE PMVHIISEPD SSARESGANE TVPTEMVQKL
0901: PSESNQMSML RGEGTVKEPT AHTISEPASS ARKSGAKETV PIEMVQKKLP SESKQSMLRG EGTAMEHKRL KSAEPDSNAR ESGANEIAPV EVVYQKLPSG
1001: SKKSMLRGEG TVKEPTEHTI SKSDFNAREL SANGIVPSEM VHKKLPSLKE SSPRTPPKDP PKVSVDNAVP VELSLESNAA PLKTDLSRDS QICKTIAAKR
1101: KPQGCDKHIK KRPLELRIHD DDLLITAIVK NRDVDSYNKF AASSDFSVAK YKKLKGQKRA TKLLGKGGTN LLGGKRISLA RKTVLCWLIA TGFLTVKDVI
1201: QYRNLKSNEV VKDGQVTWEG ILCKCCAKTL SVSDFKAHAG CCLPKSSLGL FLQSGKSYTL CQLEAWSAEL MSRRSDACGR KVEAMDENDD TCGFCGDGGE
1301: LLCCDNCPST YHEACLSAQE LPEGSWYCHN CSCRKCGTPV SENEVPSSSD ILKCLQCGDA YHGTCINHEM LPCDDKRSNT WFCGRYCKEI FLGLHSHVGI
1401: ENIIDNGLSW TILKCCSDGR RLHSARKIAH MTECNTKLAV ALTLLEECFI RMVDPRTGVD MIPHVLYNKG SNFARLDYQG FYTVILEKGD EILCVASIRL
1501: HGTKAAELPF IATCVDYRRK GMCRRLLDII EKMLRSFHVE MLVLSAIPEL VNTWVSGFGF KPIKDDERKQ LRNVNLMLFP GTSLLTKRLD GNITTKPEKE
1601: EGTHNVSGLT NGKCLPDGKA NEHLELRDLE LPEELNNEVA MNGSLRTLKR EFSPAAWFNS TKLAVGEV
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.