Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G305000.1 | Wheat | cytosol | 89.36 | 95.54 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 89.36 | 95.42 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 82.39 | 87.62 |
| Os04t0433900-00 | Rice | nucleus | 50.9 | 59.15 |
| EES12185 | Sorghum | nucleus | 48.85 | 56.97 |
| Zm00001d003648_P002 | Maize | nucleus | 48.1 | 56.8 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 24.14 | 40.97 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.08 | 36.7 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.42 | 27.34 |
| CDX98519 | Canola | nucleus | 17.17 | 24.71 |
| Bra027290.1-P | Field mustard | nucleus | 16.93 | 24.42 |
| AT3G14980.2 | Thale cress | nucleus | 18.05 | 24.39 |
| CDX97621 | Canola | nucleus | 16.86 | 24.33 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 21.28 | 24.15 |
| KRH21991 | Soybean | nucleus | 19.66 | 24.05 |
| KRH27324 | Soybean | nucleus | 19.42 | 23.8 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 22.96 | 22.12 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 8.59 | 21.36 |
| TraesCS3D01G412200.1 | Wheat | peroxisome | 9.46 | 19.61 |
| TraesCS5D01G396100.1 | Wheat | nucleus | 12.2 | 14.3 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 9.27 | 13.45 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 11.33 | 13.41 |
| TraesCS2D01G238100.1 | Wheat | nucleus | 12.45 | 13.35 |
| TraesCS4D01G205600.2 | Wheat | cytosol | 7.16 | 11.26 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | ncoils:Coil | InterPro:GNAT_dom |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | InterPro:IDM1 |
| InterPro:IPR000182 | InterPro:IPR002219 | InterPro:IPR013083 | InterPro:Jas | InterPro:PE/DAG-bd | PFAM:PF13966 |
| PFAM:PF16135 | PFscan:PS50081 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 | InterPro:RVT-Znf |
| SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2D01G303600 | EnsemblPlants:TraesCS2D01G303600.2 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr2D:-:387898137..387909426
Molecular Weight (calculated)
180233.0 Da
IEP (calculated)
6.260
GRAVY (calculated)
-0.482
Length
1607 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEVDFLVGI GMKEEDIATM LFGEKVAELR EDTFDGSEQE KQILEGIFGS GQTTSLPGAI KALVPASTPS SSASSNRMVY CRIVESFTHG SLSSYHVLYH
0101: SASQQMQNAM LCTDHHGRPS ECELVVQETP PSGDRVYTRR AVIRRSQRAK QCSILDWERV DINSVVAQRR DGRGGFGMLW NHLRLHAHLL IMDAGWKIEG
0201: KERGDKSKVD LMFESPDKEI RLASLPKAWK CFGQWLLIHS PRFDGNYYGK EWFNMYEFCY DLKNTLLCLE HEVRRPKQSL SFLHQWQLLD PFMAVVCIDK
0301: KVAALRNGVA LKAVNSRVTI LNCSDIKLLS RLSRRNVNKP VAIKYSSNYN GTHPKSRRSL LPLLLSDGQP HKEENSLHNE QSFIFGTSKH SQYEVQQRYL
0401: TMEEMNERSV RNIPHRIVKG FQDSTEPSSM PNCFSTKGEF PYSKMVQDIR DESDPLYFPP SYASDHLVEN VQIKGPSSHA GEAMEIAADM GNSADSPSDE
0501: LLIRPDLLFS HEVDEMILGT TDAVSSEHHA AAVVSDYQAG NEDVRGGPSS GTSSLLEEKD ARLEAIRDDV NNEHDVVVTG FQAGNVHVRD EPSAGALSLL
0601: AEKDTPLDVI RDDINNEHDV VVVPGFQVGN DDVRGGPSSG TLSLLKEKGT NLEAKDMSLE QMTKTGWVPS GATGGPLKIS EPQVLFVSPQ DGRLSFMNNS
0701: TFNQETLSCL NFSHDSMGAN MQLDIQTSAY EASLIQGFLY LDSEGSPIGW EVTNPEPPNQ LICGPSSEPN SKVSGHCGEL NMQNEARTSE QREISESDPS
0801: KNGQKRSEKV AGINDVRRKK QRVNSVHASH CAIGKNMDIT TEVPASCVVH NGKEQIGATS SEHASSNQKR SQEAADIQDE VREKKQKVND GLISDSIIGQ
0901: CMDSSTAENP TRCVTRCEEV QISASSSEQV PLTLVPQIKE HKEQAEDSSE PPKQLVSEQP PKKDVKFRKK QPWRRKCRFD EDDLLMTAVI HRLTARYRNH
1001: YNRMLINRIG LKSLPRSRLE NEKKCGRQKF PKSARTVLSK LLEMGIVCTM NILQYRRPGP KNVLKDGNIT EHGIRCRCCD TIFTMSNFRC HAGLKQETLT
1101: LNLFLGSGKS YSLCQLQAWF IEQKKRKESA KDTMSVQADE NDDTCGLCGD VGELICCDNC PASYHQACLP CQGSMTCFSW KLIWKNWAPP RVKFFHWLAS
1201: QDRCWTADRL ARRGLQHQPR CPLCDQAPET MRHLLLECPF ARQTWHEILS WLWMTTAGPS HEDSLMDWWL QARQNTPTLM HGSWYCSSCL CNVCGEVVNS
1301: KAPGGLLHAL ECSQCEYRYH VKCISGKVVC DQRSGLGTWF CERRCQQIYT SMRSRVGMPD HLDDGFSCTI LRNNDDQKVH SASDIALLAE CSMKLIIALS
1401: ILEECFLPIF DPRTGVDIMP PIVYNWRSDF VHLDYKGFYT VVLEKDDNLL SVASIRLHGT TVAEMPLIAT CSENRQQGMC RQLVDYIEEM LKSLEVEMLL
1501: LFAIPNLVDT WTSAFGFRPI EDCDKKKLSK VRLVSIPGTV LLKKDLYERS SETEAGELRT EQQQPLEDTG PVCTTETNLA DELGGSETNP PLADPPSAAA
1601: LGKCHVD
0101: SASQQMQNAM LCTDHHGRPS ECELVVQETP PSGDRVYTRR AVIRRSQRAK QCSILDWERV DINSVVAQRR DGRGGFGMLW NHLRLHAHLL IMDAGWKIEG
0201: KERGDKSKVD LMFESPDKEI RLASLPKAWK CFGQWLLIHS PRFDGNYYGK EWFNMYEFCY DLKNTLLCLE HEVRRPKQSL SFLHQWQLLD PFMAVVCIDK
0301: KVAALRNGVA LKAVNSRVTI LNCSDIKLLS RLSRRNVNKP VAIKYSSNYN GTHPKSRRSL LPLLLSDGQP HKEENSLHNE QSFIFGTSKH SQYEVQQRYL
0401: TMEEMNERSV RNIPHRIVKG FQDSTEPSSM PNCFSTKGEF PYSKMVQDIR DESDPLYFPP SYASDHLVEN VQIKGPSSHA GEAMEIAADM GNSADSPSDE
0501: LLIRPDLLFS HEVDEMILGT TDAVSSEHHA AAVVSDYQAG NEDVRGGPSS GTSSLLEEKD ARLEAIRDDV NNEHDVVVTG FQAGNVHVRD EPSAGALSLL
0601: AEKDTPLDVI RDDINNEHDV VVVPGFQVGN DDVRGGPSSG TLSLLKEKGT NLEAKDMSLE QMTKTGWVPS GATGGPLKIS EPQVLFVSPQ DGRLSFMNNS
0701: TFNQETLSCL NFSHDSMGAN MQLDIQTSAY EASLIQGFLY LDSEGSPIGW EVTNPEPPNQ LICGPSSEPN SKVSGHCGEL NMQNEARTSE QREISESDPS
0801: KNGQKRSEKV AGINDVRRKK QRVNSVHASH CAIGKNMDIT TEVPASCVVH NGKEQIGATS SEHASSNQKR SQEAADIQDE VREKKQKVND GLISDSIIGQ
0901: CMDSSTAENP TRCVTRCEEV QISASSSEQV PLTLVPQIKE HKEQAEDSSE PPKQLVSEQP PKKDVKFRKK QPWRRKCRFD EDDLLMTAVI HRLTARYRNH
1001: YNRMLINRIG LKSLPRSRLE NEKKCGRQKF PKSARTVLSK LLEMGIVCTM NILQYRRPGP KNVLKDGNIT EHGIRCRCCD TIFTMSNFRC HAGLKQETLT
1101: LNLFLGSGKS YSLCQLQAWF IEQKKRKESA KDTMSVQADE NDDTCGLCGD VGELICCDNC PASYHQACLP CQGSMTCFSW KLIWKNWAPP RVKFFHWLAS
1201: QDRCWTADRL ARRGLQHQPR CPLCDQAPET MRHLLLECPF ARQTWHEILS WLWMTTAGPS HEDSLMDWWL QARQNTPTLM HGSWYCSSCL CNVCGEVVNS
1301: KAPGGLLHAL ECSQCEYRYH VKCISGKVVC DQRSGLGTWF CERRCQQIYT SMRSRVGMPD HLDDGFSCTI LRNNDDQKVH SASDIALLAE CSMKLIIALS
1401: ILEECFLPIF DPRTGVDIMP PIVYNWRSDF VHLDYKGFYT VVLEKDDNLL SVASIRLHGT TVAEMPLIAT CSENRQQGMC RQLVDYIEEM LKSLEVEMLL
1501: LFAIPNLVDT WTSAFGFRPI EDCDKKKLSK VRLVSIPGTV LLKKDLYERS SETEAGELRT EQQQPLEDTG PVCTTETNLA DELGGSETNP PLADPPSAAA
1601: LGKCHVD
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.