Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97621 | Canola | nucleus | 97.76 | 97.76 |
| AT3G14980.2 | Thale cress | nucleus | 74.78 | 70.06 |
| PGSC0003DMT400032367 | Potato | nucleus | 19.3 | 44.33 |
| Os04t0691700-01 | Rice | nucleus | 15.08 | 42.64 |
| Zm00001d012354_P001 | Maize | cytosol | 11.22 | 39.68 |
| Solyc07g062600.2.1 | Tomato | nucleus | 35.82 | 34.97 |
| KRH27324 | Soybean | nucleus | 39.41 | 33.49 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 42.1 | 33.12 |
| KRH21991 | Soybean | nucleus | 38.6 | 32.72 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 25.67 | 30.2 |
| Bra002633.1-P | Field mustard | plastid | 10.95 | 28.91 |
| Bra020653.1-P | Field mustard | nucleus | 14.9 | 27.99 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.88 | 26.42 |
| KXG24184 | Sorghum | nucleus | 23.43 | 25.56 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 6.1 | 23.86 |
| Bra024246.1-P | Field mustard | nucleus | 9.78 | 23.14 |
| Bra037758.1-P | Field mustard | nucleus | 11.49 | 22.22 |
| OQU82646 | Sorghum | nucleus | 26.12 | 21.35 |
| Zm00001d026698_P011 | Maize | nucleus | 25.58 | 21.28 |
| Os04t0433900-00 | Rice | nucleus | 26.03 | 20.97 |
| EES12185 | Sorghum | nucleus | 25.49 | 20.61 |
| Bra035350.1-P | Field mustard | nucleus | 19.03 | 20.17 |
| Zm00001d003648_P002 | Maize | nucleus | 24.24 | 19.84 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 24.69 | 18.2 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 24.51 | 18.14 |
| TraesCS2A01G305000.1 | Wheat | cytosol | 24.42 | 18.1 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 26.21 | 17.83 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 25.85 | 17.73 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 26.3 | 17.57 |
| Bra017181.1-P | Field mustard | nucleus | 12.57 | 17.46 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 24.69 | 17.3 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 24.42 | 16.93 |
| Bra034381.1-P | Field mustard | nucleus | 13.64 | 14.21 |
| Bra011988.1-P | Field mustard | nucleus | 12.57 | 13.96 |
| Bra017226.1-P | Field mustard | nucleus | 11.4 | 12.19 |
| Bra002634.1-P | Field mustard | endoplasmic reticulum, vacuole | 0.18 | 0.5 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | EnsemblPlantsGene:Bra027290 |
| EnsemblPlants:Bra027290.1 | EnsemblPlants:Bra027290.1-P | InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003676 | GO:GO:0003677 |
| GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 | GO:GO:0008080 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010385 | GO:GO:0016043 |
| GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042393 | GO:GO:0043971 | GO:GO:0043972 | GO:GO:0044030 |
| GO:GO:0044154 | GO:GO:0046872 | GO:GO:0080188 | InterPro:IDM1 | InterPro:IPR000182 | InterPro:IPR013083 |
| InterPro:IPR019787 | InterPro:Jas | UniProt:M4EES8 | PFAM:PF00628 | PFAM:PF16135 | PFscan:PS50016 |
| PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| UniParc:UPI0002547BEC | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
AT3G14980 (E=0.0) | PHD finger transcription factor, putative
Coordinates
chrA05:+:20142313..20146406
Molecular Weight (calculated)
123501.0 Da
IEP (calculated)
6.371
GRAVY (calculated)
-0.543
Length
1114 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLPEAEYEML EDDSFEGSYE EHQIFREVFF ASDAGNTTTN KRCLVTGAIN FECDDSSKNV NSSLSSNNDN NSVVTSGLEG SEPSSASKDG SEVNTKAKRA
0101: KLSANKNVDE KGSPFTGFQN ADFARDMIPL HLVESSNKGV STSSYLLKQS IEKGKEVYLS GIVSQNVKEC NGKELKAIES PVSQESFATR VFSAGASTPL
0201: QLKERTKVSP NELSISKTCL KIDPKEDPRP LLYKYVCKLL ASSRWKIEKR QRSNSKYSET IYVSSQGRKF REFGSAWRSL GEILLADHKL MDTGTKNWTG
0301: INDFWSDLSL TLLDIEENMK LLNLENTRAL WWSTLEPFVT AVFVDKKVGS LRKGNKVEVA KNSIVDKFNR EDATCLKLIS GCPESVLTVS ESSLLVYDDE
0401: NANQEIRSDL ERKNASSRQE KQKNSVSKVV EASKLIAEGI HESLLRKKSH GRSKKAPLDP TSLECQDKDM GYIHVISEEN GDKRLRNDKM KSSKKGRRKN
0501: CNQDDVVFKT KGKDACGIRS SQKKKKAQKS KARTKKKNNR GGCRLLPRST SNGEKQFGQG NWCASGPRTV LSWLIASKVI SKDEVIQLRD PDDDDTVVKT
0601: GIVTKEGVVC TCCNRTISLS EFKKHAGFDQ GCPCLNLFMG SGKPFASCQL EAWYAEYKAR RNGSRSEEGY DGDDPNDDSC GICGDGGELI CCDNCPSTFH
0701: QACLAMKVLP EGSWYCSSCT CWICREFVSD NAPDDRSQDF KCTQCAHKYH GVCLQERSKR REPFPETYFC GKSCEKVYTG LTSRVGVISS PNADGLSWTV
0801: LKCFQEDGKA HSARRLALKA ECNSKLAVAL SVMEECFLSM VDARTGIDMI PHVLYNWGSK FARLDFDGFH TVVVEKNDVM ISVASIRVHG VSVAEMPLVA
0901: TCSKYRRQGM CRILVTAIEE MLMSLKVENL VVAALPSLVE TWTEGFGFKT MDDEEREALK RLNLMVFPGT VLLKKTLHQC ANPNTVKGTA SKEADLDNAG
1001: FAVTTCNQMV PEGSDDGPPP GLPVPLGTNQ TEPVAEAEKP AQERNNTKED CLEKELSKFS SQGEEEVKIR TSSSCEVVEE ERQVSSVAVV NNVSDEMLLC
1101: VDEQLDFDSS EDSD
0101: KLSANKNVDE KGSPFTGFQN ADFARDMIPL HLVESSNKGV STSSYLLKQS IEKGKEVYLS GIVSQNVKEC NGKELKAIES PVSQESFATR VFSAGASTPL
0201: QLKERTKVSP NELSISKTCL KIDPKEDPRP LLYKYVCKLL ASSRWKIEKR QRSNSKYSET IYVSSQGRKF REFGSAWRSL GEILLADHKL MDTGTKNWTG
0301: INDFWSDLSL TLLDIEENMK LLNLENTRAL WWSTLEPFVT AVFVDKKVGS LRKGNKVEVA KNSIVDKFNR EDATCLKLIS GCPESVLTVS ESSLLVYDDE
0401: NANQEIRSDL ERKNASSRQE KQKNSVSKVV EASKLIAEGI HESLLRKKSH GRSKKAPLDP TSLECQDKDM GYIHVISEEN GDKRLRNDKM KSSKKGRRKN
0501: CNQDDVVFKT KGKDACGIRS SQKKKKAQKS KARTKKKNNR GGCRLLPRST SNGEKQFGQG NWCASGPRTV LSWLIASKVI SKDEVIQLRD PDDDDTVVKT
0601: GIVTKEGVVC TCCNRTISLS EFKKHAGFDQ GCPCLNLFMG SGKPFASCQL EAWYAEYKAR RNGSRSEEGY DGDDPNDDSC GICGDGGELI CCDNCPSTFH
0701: QACLAMKVLP EGSWYCSSCT CWICREFVSD NAPDDRSQDF KCTQCAHKYH GVCLQERSKR REPFPETYFC GKSCEKVYTG LTSRVGVISS PNADGLSWTV
0801: LKCFQEDGKA HSARRLALKA ECNSKLAVAL SVMEECFLSM VDARTGIDMI PHVLYNWGSK FARLDFDGFH TVVVEKNDVM ISVASIRVHG VSVAEMPLVA
0901: TCSKYRRQGM CRILVTAIEE MLMSLKVENL VVAALPSLVE TWTEGFGFKT MDDEEREALK RLNLMVFPGT VLLKKTLHQC ANPNTVKGTA SKEADLDNAG
1001: FAVTTCNQMV PEGSDDGPPP GLPVPLGTNQ TEPVAEAEKP AQERNNTKED CLEKELSKFS SQGEEEVKIR TSSSCEVVEE ERQVSSVAVV NNVSDEMLLC
1101: VDEQLDFDSS EDSD
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.