Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 4
- nucleus 4
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_02s0234g00060.t01 | Wine grape | cytosol | 11.61 | 38.89 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 15.17 | 22.46 |
| Bra020653.1-P | Field mustard | nucleus | 27.01 | 19.22 |
| Bra024246.1-P | Field mustard | nucleus | 21.09 | 18.9 |
| Bra037758.1-P | Field mustard | nucleus | 25.12 | 18.4 |
| KRH67232 | Soybean | nucleus | 26.54 | 17.75 |
| Bra035350.1-P | Field mustard | nucleus | 27.96 | 11.23 |
| Bra017181.1-P | Field mustard | nucleus | 20.85 | 10.97 |
| Bra027290.1-P | Field mustard | nucleus | 28.91 | 10.95 |
| Bra011988.1-P | Field mustard | nucleus | 20.85 | 8.77 |
| Bra034381.1-P | Field mustard | nucleus | 21.56 | 8.5 |
| Bra017226.1-P | Field mustard | nucleus | 19.19 | 7.77 |
| Bra002634.1-P | Field mustard | endoplasmic reticulum, vacuole | 1.66 | 1.75 |
| Os03t0794700-01 | Rice | plasma membrane | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | InterPro:Acyl_CoA_acyltransferase | EnsemblPlantsGene:Bra002633 | EnsemblPlants:Bra002633.1 | EnsemblPlants:Bra002633.1-P |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:Jas | UniProt:M4CEK2 |
| PFAM:PF16135 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| UniParc:UPI000254374E | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
AT5G58610 (E=7e-093) | PHD finger transcription factor, putative
Coordinates
chrA10:-:8470642..8472952
Molecular Weight (calculated)
47753.5 Da
IEP (calculated)
8.538
GRAVY (calculated)
-0.345
Length
422 amino acids
Sequence
(BLAST)
(BLAST)
001: MLTDIKNRVT GRGKTRVSRS SKRVQRVMTP TSRNQSPRTV LSWLIDNNVI LPRENIRCRN QKDHTVRKHG KLTREGIKCS CCRRIFSISG FEAHANGGSC
101: RAAANIFLDD GRSLLECQVE AYKTRKKAQP TNLLKIKLRH GENDIVCSVC HYGGKLILCD GCPSAFHATC LGLEAETHCK LSVALDVMHE LFEPVKRRHS
201: GGDLAEDVIF SRWSKYKRLN FSGFYTVILE RNDELITVAT VRILGKKVAE MPFIGTRFQH RQHGMCRVFM DELEKVLIDL GVERLVLPAV PCVLDTWINS
301: FGFSKVTIPE KKDFLQFTFL EFGRTILCQK ILIKSSIADP VPNTVSLGET NCDIITIEDN YASDDRSKVH EAEQDISIRD NSASDDRSEV HQAEQHLEES
401: SSTKNPPEYV VQTFTPLINL SK
101: RAAANIFLDD GRSLLECQVE AYKTRKKAQP TNLLKIKLRH GENDIVCSVC HYGGKLILCD GCPSAFHATC LGLEAETHCK LSVALDVMHE LFEPVKRRHS
201: GGDLAEDVIF SRWSKYKRLN FSGFYTVILE RNDELITVAT VRILGKKVAE MPFIGTRFQH RQHGMCRVFM DELEKVLIDL GVERLVLPAV PCVLDTWINS
301: FGFSKVTIPE KKDFLQFTFL EFGRTILCQK ILIKSSIADP VPNTVSLGET NCDIITIEDN YASDDRSKVH EAEQDISIRD NSASDDRSEV HQAEQHLEES
401: SSTKNPPEYV VQTFTPLINL SK
0001: MGLFDCRVYR VFHFLNLLSN FGFFSRSLEE GSLGSWYLGT VTSAKKRRRR CIRYDNILSD DGSGNLVETV DVSDIVEGLD DCTDVSDTFR GRLRPVPPKL
0101: DVAKLNLAYG LCVDVFFSDA WWEGVLFDHE NGSEKRRVFF PDLGDELDAD LQSLRITQDW NEATETWECR GSWLFLDLIE IYKEYNYLPV SVKQLWYDIR
0201: DRIGFVRIQE WTCSTKHLWQ DLMLGVIEDN LKITIDQFLH DFDAERYPQL KLLNEASQAV YETNACLSGM LTIAPQEHQF SCIDKDFKPA SQRCQSLSVL
0301: TSVSGIRSEA SDINKATEIS SKKSTAAHKK DILHKKPGIW HPFDCLAKSG PQAVSSFIRS PLLPMAMHVR MHLKYMGWTI EHMVDEAGRQ RFRYLSPNGR
0401: LKEHSLRQVC FRLKQPDKSL TTPGMANPPS LSSENQTYST QEMRSIVLAL PAFNRSVALG EGLKLSTDTL LEYETQGNEE VFTRESRNFC PKKAFPGQKE
0501: TLRVRIEPKT KAQGIILRLK SKRKQTPKKD EVIVGLQNVN RSMRRGHTSK KLMDIKNRVT SRGKTRVLRS RKRAQRVITP ISRKHSPRNI LSWLMDNNVV
0601: LPRENIRCCN QKDTTVRKEG KLTREGIKCS CCRRVFTING FEVHANGASC SGAANIFLDD GRSLLECQVE AYKKRKKAQP PDMLKMKLRQ GENDVFCSVC
0701: HYGGKLILCD GCPSAFHANC LGLEDVPDGD WFCQSCCCGA CGQFFLKTTS TNAKEEKFIS CKQCELKYHP SCLRYDGACD SLDKILGEKW FCSKDCEESL
0801: EPNMYGDDAS KIEAAAENHC ILSVALDVMH ELFEPVKRPH GGRDLAEDVI FSRWSKFKRL NFSGFYTVLL ERNNELVSVA TVRILGKKVA EMPFIGTRFQ
0901: HRQRGMCRVL INELEKVLID LGVERLVLPA VPCVLNTWIN SFGFTKMTIS ERKNFLKFTL LEFGRTILCE KILIKSGVAD PIPSIASLGE QQCDILRIED
1001: NSASDDGSEV HQAEQHLEES RSTKNPPEYV VQTLTPLHHN PKTPTTRKKK HDTNALHGSW ERTNT
0101: DVAKLNLAYG LCVDVFFSDA WWEGVLFDHE NGSEKRRVFF PDLGDELDAD LQSLRITQDW NEATETWECR GSWLFLDLIE IYKEYNYLPV SVKQLWYDIR
0201: DRIGFVRIQE WTCSTKHLWQ DLMLGVIEDN LKITIDQFLH DFDAERYPQL KLLNEASQAV YETNACLSGM LTIAPQEHQF SCIDKDFKPA SQRCQSLSVL
0301: TSVSGIRSEA SDINKATEIS SKKSTAAHKK DILHKKPGIW HPFDCLAKSG PQAVSSFIRS PLLPMAMHVR MHLKYMGWTI EHMVDEAGRQ RFRYLSPNGR
0401: LKEHSLRQVC FRLKQPDKSL TTPGMANPPS LSSENQTYST QEMRSIVLAL PAFNRSVALG EGLKLSTDTL LEYETQGNEE VFTRESRNFC PKKAFPGQKE
0501: TLRVRIEPKT KAQGIILRLK SKRKQTPKKD EVIVGLQNVN RSMRRGHTSK KLMDIKNRVT SRGKTRVLRS RKRAQRVITP ISRKHSPRNI LSWLMDNNVV
0601: LPRENIRCCN QKDTTVRKEG KLTREGIKCS CCRRVFTING FEVHANGASC SGAANIFLDD GRSLLECQVE AYKKRKKAQP PDMLKMKLRQ GENDVFCSVC
0701: HYGGKLILCD GCPSAFHANC LGLEDVPDGD WFCQSCCCGA CGQFFLKTTS TNAKEEKFIS CKQCELKYHP SCLRYDGACD SLDKILGEKW FCSKDCEESL
0801: EPNMYGDDAS KIEAAAENHC ILSVALDVMH ELFEPVKRPH GGRDLAEDVI FSRWSKFKRL NFSGFYTVLL ERNNELVSVA TVRILGKKVA EMPFIGTRFQ
0901: HRQRGMCRVL INELEKVLID LGVERLVLPA VPCVLNTWIN SFGFTKMTIS ERKNFLKFTL LEFGRTILCE KILIKSGVAD PIPSIASLGE QQCDILRIED
1001: NSASDDGSEV HQAEQHLEES RSTKNPPEYV VQTLTPLHHN PKTPTTRKKK HDTNALHGSW ERTNT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.