Factsheet for Bra037758.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY60050	Canola	nucleus	95.14	98.21
Bra010170.1-P	Field mustard	cytosol, mitochondrion, nucleus	32.81	66.32
AT5G63900.1	Thale cress	nucleus	61.11	63.2
Bra024246.1-P	Field mustard	nucleus	47.57	58.17
Zm00001d008232_P001	Maize	cytosol	18.58	33.44
KRH52096	Soybean	nucleus	28.47	27.15
KXG31496	Sorghum	cytosol, extracellular	4.69	25.71
HORVU4Hr1G056300.1	Barley	extracellular	7.99	25.41
Bra002633.1-P	Field mustard	plastid	18.4	25.12
TraesCS2D01G083000.1	Wheat	nucleus	22.74	20.28
TraesCS2A01G085100.1	Wheat	nucleus	22.57	20.19
Zm00001d022583_P001	Maize	nucleus	24.13	19.86
TraesCS2B01G099800.1	Wheat	nucleus	22.57	19.85
Bra020653.1-P	Field mustard	nucleus	18.75	18.21
GSMUA_AchrUn_...	Banana	nucleus	27.43	16.42
Bra017181.1-P	Field mustard	nucleus	18.75	13.47
GSMUA_Achr6P32880_001	Banana	nucleus	24.65	13.4
Zm00001d028749_P002	Maize	mitochondrion	27.26	12.33
TraesCS4B01G194600.1	Wheat	nucleus	27.6	11.72
TraesCS4D01G195300.1	Wheat	nucleus	27.43	11.64
TraesCS4A01G109600.1	Wheat	nucleus	27.43	11.63
Bra035350.1-P	Field mustard	nucleus	21.18	11.61
Bra027290.1-P	Field mustard	nucleus	22.22	11.49
Bra011988.1-P	Field mustard	nucleus	19.27	11.07
Bra017226.1-P	Field mustard	nucleus	19.44	10.75
Bra034381.1-P	Field mustard	nucleus	19.27	10.37
Bra002634.1-P	Field mustard	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:Bra037758	EnsemblPlants:Bra037758.1
EnsemblPlants:Bra037758.1-P	ncoils:Coil	InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0008080	GO:GO:0016740	GO:GO:0046872	InterPro:IPR000182	InterPro:IPR013083	InterPro:IPR019787
UniProt:M4F9J5	PFAM:PF13673	PFscan:PS50016	PFscan:PS51186	PANTHER:PTHR42672	PANTHER:PTHR42672:SF9
SMART:SM00249	SUPFAM:SSF55729	SUPFAM:SSF57903	UniParc:UPI0002541A6D	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD
InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	:	:	:	:

Description

AT5G63900 (E=2e-158) | PHD finger family protein

Coordinates

chrA09:+:3423474..3425204

Molecular Weight (calculated)

65207.2 Da

IEP (calculated)

7.835

GRAVY (calculated)

-0.427

Length

576 amino acids

Sequence
(BLAST)

001: MMTTTTDDLN DPCDFVTVEA ESNPDSLQQW LSTVENGKAN GTRRSDISTK AKKHLSSLGW RFAYFPKRNK KRELRYKSPK GKWFYSLATA CSSCVHEDDD
101: GSRRELIVPE SDESPRDLSV AFIETVSGDN VSRRRKRVKK DCETAAFSGN KALIVSKKRK ERVNVGETAA FSGTKVVLIV DVSKKRKRGN DCETTAFNGV
201: ALKEEKNHPL SDILNVDVIN QQEKKRMAAA AFDSKAKGEI RPRFEKSLRK VLQVMEKKNE TCEKEYIRFW RKDCGPEKNC DVCCVCHFGG ELLLCDGCPS
301: AFHYTCIGLP ILPEEELWFC PCCCCDICES MVTLGNSKLM TCEQCQRRFH LKCLKEEACL VSCRVWFCSK QCSRVYSALQ SLLGRKIVVG EEGLVWSLIR
401: APNDGEHYDD EQMAKLDSAV EILHQGFEPS TDPFSGRDLV EELIYRKDAS GVGRGFYTVL VERNNEPVTV AAMRVDKDVA EIPLVATLSS YRRSGMCRVL
501: MDELEKQMSR MGVRRLVLPA AKDVVTTWSQ GFGFKVMESW ERLEFVKHGM LDFVGTVMCS KFLREREVSG ESSLTE

Best Arabidopsis Sequence Match ( AT5G63900.1 )
(BLAST)

001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.