Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS2D01G083000.1 | Wheat | nucleus | 92.55 | 92.26 |
TraesCS2B01G099800.1 | Wheat | nucleus | 90.99 | 89.47 |
Zm00001d008232_P001 | Maize | cytosol | 28.88 | 58.12 |
Zm00001d022583_P001 | Maize | nucleus | 45.5 | 41.86 |
OQU90556 | Sorghum | mitochondrion | 48.45 | 39.29 |
CDX73252 | Canola | cytosol | 10.4 | 34.72 |
Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 13.04 | 29.47 |
CDY26900 | Canola | cytosol, mitochondrion, nucleus | 13.04 | 29.47 |
VIT_06s0004g06800.t01 | Wine grape | nucleus | 29.66 | 27.02 |
KRH52096 | Soybean | nucleus | 25.0 | 26.66 |
CDX84460 | Canola | nucleus | 17.08 | 23.97 |
CDX81205 | Canola | nucleus | 20.34 | 23.95 |
CDY60050 | Canola | nucleus | 20.19 | 23.3 |
AT5G63900.1 | Thale cress | nucleus | 20.03 | 23.16 |
Bra024246.1-P | Field mustard | nucleus | 16.93 | 23.14 |
CDY43768 | Canola | nucleus | 16.93 | 23.14 |
PGSC0003DMT400043562 | Potato | nucleus | 32.76 | 22.96 |
Bra037758.1-P | Field mustard | nucleus | 20.19 | 22.57 |
Solyc03g071550.1.1 | Tomato | nucleus | 33.07 | 22.12 |
TraesCS4A01G109600.1 | Wheat | nucleus | 44.1 | 20.91 |
GSMUA_Achr6P32880_001 | Banana | nucleus | 34.16 | 20.75 |
TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 21.43 | 19.69 |
KRH30259 | Soybean | nucleus | 28.73 | 19.54 |
Solyc06g082050.1.1 | Tomato | nucleus | 9.78 | 18.53 |
VIT_06s0004g06810.t01 | Wine grape | nucleus | 33.39 | 18.07 |
Solyc09g031580.2.1 | Tomato | nucleus | 33.54 | 17.81 |
PGSC0003DMT400056776 | Potato | nucleus | 33.39 | 17.67 |
KRH72700 | Soybean | nucleus | 29.97 | 17.56 |
KRH17051 | Soybean | nucleus | 28.73 | 17.54 |
AT5G58610.3 | Thale cress | nucleus | 29.81 | 17.53 |
KRH30263 | Soybean | nucleus | 30.75 | 17.07 |
CDX80351 | Canola | golgi, plasma membrane | 22.52 | 14.44 |
TraesCS3A01G514100.1 | Wheat | plastid | 23.6 | 14.19 |
TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 19.41 | 13.3 |
TraesCS7A01G002000.1 | Wheat | nucleus | 18.94 | 12.4 |
CDY52116 | Canola | nucleus | 27.48 | 12.39 |
TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 19.1 | 10.63 |
TraesCS5A01G386300.1 | Wheat | nucleus | 21.58 | 10.14 |
TraesCS2A01G235700.1 | Wheat | nucleus | 23.14 | 9.94 |
TraesCS4A01G099600.1 | Wheat | cytosol | 14.91 | 9.47 |
TraesCS2A01G305000.1 | Wheat | cytosol | 21.89 | 9.38 |
TraesCS2A01G563500.2 | Wheat | nucleus | 21.43 | 8.5 |
Protein Annotations
EnsemblPlants:TraesCS2A01G085100.1 | EnsemblPlantsGene:TraesCS2A01G085100 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:IPR013083 |
InterPro:IPR019787 | InterPro:Jas | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | PFAM:PF16135 | PFscan:PS50016 | SEG:seg | SMART:SM00249 |
SUPFAM:SSF55729 | SUPFAM:SSF57903 | TIGR:cd04301 | MapMan:15.5.30 | : | : |
Description
No Description!
Coordinates
chr2A:+:39006939..39009291
Molecular Weight (calculated)
69726.9 Da
IEP (calculated)
8.698
GRAVY (calculated)
-0.308
Length
644 amino acids
Sequence
(BLAST)
(BLAST)
001: MDIAEYVAFM AGGGRGPRGE ELRRRAKDHL LASGWTFYRF AKCDGRQELR YRAPHGASYI SLIVACKKFQ LFSTAPPRTT ARGKPSKKRA APDCSSGVGK
101: EIARVISPIG AENGGRKRGF GGGEDVCGPA VGNPFAGECP ARRRKVRRVS ALYADDALKK YAAKKKRKKA SASPQSPASP PASPQSPAST AASPSRVLRP
201: RTKDGDKAQA AAAAACQPTR ARTILAVLMD KKILPPTAKL SYKRTRDGPP AKQGTVTVQG TIRCACGCGG KAFTVAEFAA HAGGCGAERP SASVYLNDGR
301: SLSQCLVQLM RAHGGNMLPT GSPSPRARLK RRCPPELGDG DWVCSVCADF GDMLLCDCCP STFHHGCVGL DATPQGEWFC PSCRCAVCGS SEFEPDDGEF
401: TDKTVIYCDQ CEREYHAGCI RGRGDQLECC PEGPWLCSHD CSNIFQRLQG LVGRSMPTSV EGVTFTVLRS TNLPEEEGMA AEEHGKLCAA FDVLHECFIT
501: LIEPQTRTDL SHDIVFNRES ELRRLNFRGF YVVGLEKGGE LITVGTLRVY GKKVAELPLI GTRFVHRRQG MCRLLINQLE KLLGELGVER LVLPAVPELL
601: PTWTGSFGFQ SMSHSDKMEI AEHTVMCFQG TTMCQKFIVG TATP
101: EIARVISPIG AENGGRKRGF GGGEDVCGPA VGNPFAGECP ARRRKVRRVS ALYADDALKK YAAKKKRKKA SASPQSPASP PASPQSPAST AASPSRVLRP
201: RTKDGDKAQA AAAAACQPTR ARTILAVLMD KKILPPTAKL SYKRTRDGPP AKQGTVTVQG TIRCACGCGG KAFTVAEFAA HAGGCGAERP SASVYLNDGR
301: SLSQCLVQLM RAHGGNMLPT GSPSPRARLK RRCPPELGDG DWVCSVCADF GDMLLCDCCP STFHHGCVGL DATPQGEWFC PSCRCAVCGS SEFEPDDGEF
401: TDKTVIYCDQ CEREYHAGCI RGRGDQLECC PEGPWLCSHD CSNIFQRLQG LVGRSMPTSV EGVTFTVLRS TNLPEEEGMA AEEHGKLCAA FDVLHECFIT
501: LIEPQTRTDL SHDIVFNRES ELRRLNFRGF YVVGLEKGGE LITVGTLRVY GKKVAELPLI GTRFVHRRQG MCRLLINQLE KLLGELGVER LVLPAVPELL
601: PTWTGSFGFQ SMSHSDKMEI AEHTVMCFQG TTMCQKFIVG TATP
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.