Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc03g071550.1.1 | Tomato | nucleus | 92.6 | 88.37 |
| PGSC0003DMT400056776 | Potato | nucleus | 83.9 | 63.35 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 35.58 | 46.25 |
| Zm00001d008232_P001 | Maize | cytosol | 13.71 | 39.38 |
| KXG31496 | Sorghum | cytosol, extracellular | 4.03 | 35.24 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 42.98 | 33.19 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 6.53 | 33.15 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 23.18 | 32.97 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 22.96 | 32.76 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 22.85 | 32.06 |
| KRH30259 | Soybean | nucleus | 31.66 | 30.73 |
| Zm00001d022583_P001 | Maize | nucleus | 22.85 | 30.0 |
| KRH30263 | Soybean | nucleus | 37.76 | 29.91 |
| KRH17051 | Soybean | nucleus | 33.73 | 29.38 |
| KRH72700 | Soybean | nucleus | 33.41 | 27.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.07 | 26.82 |
| PGSC0003DMT400032367 | Potato | nucleus | 13.38 | 25.36 |
| PGSC0003DMT400067527 | Potato | nucleus | 16.32 | 24.12 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 27.53 | 23.87 |
| PGSC0003DMT400028730 | Potato | nucleus | 12.08 | 21.6 |
| Zm00001d028749_P002 | Maize | mitochondrion | 28.62 | 20.66 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 28.29 | 19.16 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 28.18 | 19.09 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 28.07 | 19.0 |
| PGSC0003DMT400091155 | Potato | nucleus | 3.59 | 16.58 |
| PGSC0003DMT400009969 | Potato | nucleus | 15.23 | 14.86 |
| PGSC0003DMT400001219 | Potato | nucleus | 15.89 | 13.79 |
| PGSC0003DMT400072425 | Potato | nucleus | 10.45 | 12.52 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0016740 | GO:GO:0046872 | InterPro:IPR000182 |
| InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:M1BEV3 | PFAM:PF00628 | PFAM:PF16135 |
| EnsemblPlantsGene:PGSC0003DMG400016917 | PGSC:PGSC0003DMG400016917 | EnsemblPlants:PGSC0003DMT400043562 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF9 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI0002965373 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400016917]
Coordinates
chr3:-:16816166..16820923
Molecular Weight (calculated)
104404.0 Da
IEP (calculated)
7.784
GRAVY (calculated)
-0.413
Length
919 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPFIEAICN SVSGEMLCVD PYVSCLQPVE KQLVSEGFAP ISEDVPMSGS VMFNSVLPSQ EQQPAISPNA LSVLHPPKNE ISSTLSITKS ERLNFQSSNK
101: KHSRKRKRLE WKTISHETEL CPDAVSECND NNMSNHRSLK SLQELKEHLS YLGWKIEQAK DYNIIRTRYV ASDGKIFQSL RKVCKMLEKS ETWVEGQKTS
201: YDGSSDDLNL STCLAKAQTC SEVSELQYTS QEPIVPPEIC PEAVIDYCLL GSTDNPAYKK LNSGEKKSMI MKAKKHLAAI GWNFSYCQKG DRRELRYCPP
301: HGRKKFISLR TACIWCMQQW KAEGQMPELF SRSNVLEFQV NLAPQRTSCK KLSMATFSVL PLPKEPAQLN KVTVCEISKT RKKSNHTGGW NMLKEGKSRS
401: SRTVVDGTES QSSARQLRSS KRARQATVSS SLHHTPRTVL SWLIDNNVVL PRAKVQYRVK KDGRPMAEGQ ITRAGIKCKC CQKVYGISNF EVHAGSSYHR
501: PSANIFLEDG RSLLDCQLQM KEKSIVRNTR KRSPLLKKHS HLGTNDNVCS VCHYGGELLL CDECPSSFHT GCLGMKEVPD GEWFCPSCCC EMCGESRFDK
601: NKDHFTESSL LICCQCEHKY HARCVRDKGL QKLDCYPVGK WFCNKRCEQI CLGIHQLLAK PVMVGIDNLT WTLLKYVKPD DFDSDAAKDE FVLETYSKLD
701: VALDVMHECF EPVEEPYTRR DLMEDVIFNR WSELNRLNFQ GFYTVLLERN DEVITVATVR IYGEKVAEVP LVATRFQYRR LGMCCILMNE LEKKLMELGV
801: ERLVLPAAPA VLNTWTTSFG FTMVKESQKL NFLNYTFLDF QGTVMCQKLL QNIPPEVSSE STEVYQTQLD HIKSKETVEL DGNSALSEVF QAEQIEGSEI
901: VDQGYAEYVS LLFSLFFKD
101: KHSRKRKRLE WKTISHETEL CPDAVSECND NNMSNHRSLK SLQELKEHLS YLGWKIEQAK DYNIIRTRYV ASDGKIFQSL RKVCKMLEKS ETWVEGQKTS
201: YDGSSDDLNL STCLAKAQTC SEVSELQYTS QEPIVPPEIC PEAVIDYCLL GSTDNPAYKK LNSGEKKSMI MKAKKHLAAI GWNFSYCQKG DRRELRYCPP
301: HGRKKFISLR TACIWCMQQW KAEGQMPELF SRSNVLEFQV NLAPQRTSCK KLSMATFSVL PLPKEPAQLN KVTVCEISKT RKKSNHTGGW NMLKEGKSRS
401: SRTVVDGTES QSSARQLRSS KRARQATVSS SLHHTPRTVL SWLIDNNVVL PRAKVQYRVK KDGRPMAEGQ ITRAGIKCKC CQKVYGISNF EVHAGSSYHR
501: PSANIFLEDG RSLLDCQLQM KEKSIVRNTR KRSPLLKKHS HLGTNDNVCS VCHYGGELLL CDECPSSFHT GCLGMKEVPD GEWFCPSCCC EMCGESRFDK
601: NKDHFTESSL LICCQCEHKY HARCVRDKGL QKLDCYPVGK WFCNKRCEQI CLGIHQLLAK PVMVGIDNLT WTLLKYVKPD DFDSDAAKDE FVLETYSKLD
701: VALDVMHECF EPVEEPYTRR DLMEDVIFNR WSELNRLNFQ GFYTVLLERN DEVITVATVR IYGEKVAEVP LVATRFQYRR LGMCCILMNE LEKKLMELGV
801: ERLVLPAAPA VLNTWTTSFG FTMVKESQKL NFLNYTFLDF QGTVMCQKLL QNIPPEVSSE STEVYQTQLD HIKSKETVEL DGNSALSEVF QAEQIEGSEI
901: VDQGYAEYVS LLFSLFFKD
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI G
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.