Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc11g066480.1.1 | Tomato | nucleus | 92.26 | 91.82 |
| Zm00001d045631_P002 | Maize | cytosol | 13.03 | 49.64 |
| CDX71404 | Canola | extracellular, golgi, vacuole | 23.98 | 49.51 |
| VIT_06s0061g00840.t01 | Wine grape | nucleus | 38.15 | 49.03 |
| GSMUA_AchrUn_... | Banana | nucleus | 36.36 | 47.24 |
| PGSC0003DMT400028730 | Potato | nucleus | 21.44 | 44.16 |
| GSMUA_Achr4P12040_001 | Banana | nucleus | 36.07 | 43.66 |
| HORVU7Hr1G122600.9 | Barley | cytosol, nucleus | 29.65 | 41.98 |
| KRH26543 | Soybean | nucleus | 38.81 | 41.85 |
| KXG20990 | Sorghum | nucleus | 34.37 | 40.94 |
| KRH22815 | Soybean | nucleus | 38.43 | 40.42 |
| CDX77146 | Canola | nucleus | 34.66 | 39.8 |
| PGSC0003DMT400072425 | Potato | nucleus | 28.8 | 39.77 |
| PGSC0003DMT400009969 | Potato | nucleus | 34.09 | 38.32 |
| Zm00001d014909_P003 | Maize | nucleus | 33.24 | 37.77 |
| CDY04521 | Canola | nucleus | 33.52 | 37.1 |
| TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 32.77 | 36.91 |
| Bra011988.1-P | Field mustard | nucleus | 34.94 | 36.89 |
| AT2G27980.1 | Thale cress | cytosol, plastid | 37.3 | 36.85 |
| CDY30516 | Canola | nucleus | 36.26 | 36.61 |
| Bra034381.1-P | Field mustard | nucleus | 36.54 | 36.17 |
| KXG19082 | Sorghum | nucleus | 31.07 | 36.07 |
| Zm00001d035862_P003 | Maize | nucleus | 32.58 | 34.99 |
| Os06t0101000-01 | Rice | nucleus, plastid | 33.52 | 34.63 |
| TraesCS7A01G002000.1 | Wheat | nucleus | 31.73 | 34.15 |
| TraesCS7B01G489100.1 | Wheat | nucleus, plastid | 32.96 | 33.4 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 33.24 | 31.77 |
| TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 33.81 | 30.94 |
| Zm00001d045629_P002 | Maize | plastid | 19.45 | 27.07 |
| PGSC0003DMT400032367 | Potato | nucleus | 9.82 | 21.44 |
| PGSC0003DMT400067527 | Potato | nucleus | 11.52 | 19.61 |
| PGSC0003DMT400043562 | Potato | nucleus | 13.79 | 15.89 |
| PGSC0003DMT400056776 | Potato | nucleus | 14.45 | 12.57 |
| PGSC0003DMT400091155 | Potato | nucleus | 2.27 | 12.06 |
Protein Annotations
| EntrezGene:102580511 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:M0ZI39 |
| PFAM:PF16135 | EnsemblPlantsGene:PGSC0003DMG400000459 | PGSC:PGSC0003DMG400000459 | EnsemblPlants:PGSC0003DMT400001219 | ScanProsite:PS01359 | PFscan:PS50016 |
| PANTHER:PTHR42672 | PANTHER:PTHR42672:SF12 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI0002967DEF |
| RefSeq:XP_006349045.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
PHD zinc finger protein [Source:PGSC_GENE;Acc:PGSC0003DMG400000459]
Coordinates
chr11:-:39272851..39282341
Molecular Weight (calculated)
116453.0 Da
IEP (calculated)
4.684
GRAVY (calculated)
-0.460
Length
1059 amino acids
Sequence
(BLAST)
(BLAST)
0001: MANGSEKGEI VVSSIRTGMK REFAMMMKAQ ADWDIDVGQK RVTRTPQSSQ KSPGNVSNDK VYVKKRKREV KNVVDSEDLS NLKVVVGKEL ESDGVVKKDD
0101: NVVLLSEDLS NSKVVGEELE SDGVVKMDEN VVLLSEDLLN SKVVVEELES DGVVKKDDNV VLLSEDLSNS KVVGEELERD GVVTRDENVV ILSEEEEPKS
0201: DVVDCTRDDE KKGKMDEGVV GSGEEGNASL QNCGDDAKTE KGESVKTNDD FDEEMAEIVP ELAVTAQGDG KDEQKCGDDT QSEMPTTGKA SDFIVGAMPE
0301: IIPEAAVTAQ ADGKNEQNCR DDAKTEMAKT VKANDCSVEA RPEIVPELAV TAQGDANDEQ IQTPMRRFTR SALKTEEDTK VSQCDSIKIV DAHETDSVGT
0401: MSAPAKLELK MSKKVALTKI PTKLKDLLET GLLEGLPVRY IRGTTKGRGR PAKGLSGEIR GSGILCFCDN CHGTSVVTPN QFELHANSAN KRPPEYIYLE
0501: NGKSLRDVLS MCKDAPSDEV EMVIKNAIGS ADAKINASAC MTAQEFQSPP VQSSEASSRS TSSAPSTKLT DRMPSGSGTQ SKVHGKLTRK DLRMHKLVFE
0601: EDALPDGTAL AYYVRGQKLL EGYKKGHGIF CYCCNTEVSP SQFEAHAGCA SRRKPYLYIY TSNGVSLHEL SIKLSKERRS SAEENDDLCS ICADGGDLLC
0701: CDNCPRAFHA ECVCLPSIPT GTWYCKYCEN MFAKERFVEN NANAIAAGRV AGVDAIEQIT RRCIRMVETL ETEVSVCVLC RDQDFSKSGF GPRTVIICDQ
0801: CEKEYHVGCL KEHNIDDLQE LPKDKWFCCT DCSRIHFALE KVVSDGEQNI PESLLKVLKE KNEGKGSVNN SSLDIKWRLL SGKMSSEETR VWLSSAVSIF
0901: HEQFDPIADA STSRLDLIPH MVYGRSFKDQ DYGGMFCAIL LVNSLVVSAG IFRVFGKEVA ELPLVATSTN CQGQGYFQSL FSCMENLLQS LKVENLVLPS
1001: AEEAEAIWTN RFSFTKIPEE QMKQYRKNYQ MMVFSGTSML QKQVGGSQRD EDNFTLGDA
0101: NVVLLSEDLS NSKVVGEELE SDGVVKMDEN VVLLSEDLLN SKVVVEELES DGVVKKDDNV VLLSEDLSNS KVVGEELERD GVVTRDENVV ILSEEEEPKS
0201: DVVDCTRDDE KKGKMDEGVV GSGEEGNASL QNCGDDAKTE KGESVKTNDD FDEEMAEIVP ELAVTAQGDG KDEQKCGDDT QSEMPTTGKA SDFIVGAMPE
0301: IIPEAAVTAQ ADGKNEQNCR DDAKTEMAKT VKANDCSVEA RPEIVPELAV TAQGDANDEQ IQTPMRRFTR SALKTEEDTK VSQCDSIKIV DAHETDSVGT
0401: MSAPAKLELK MSKKVALTKI PTKLKDLLET GLLEGLPVRY IRGTTKGRGR PAKGLSGEIR GSGILCFCDN CHGTSVVTPN QFELHANSAN KRPPEYIYLE
0501: NGKSLRDVLS MCKDAPSDEV EMVIKNAIGS ADAKINASAC MTAQEFQSPP VQSSEASSRS TSSAPSTKLT DRMPSGSGTQ SKVHGKLTRK DLRMHKLVFE
0601: EDALPDGTAL AYYVRGQKLL EGYKKGHGIF CYCCNTEVSP SQFEAHAGCA SRRKPYLYIY TSNGVSLHEL SIKLSKERRS SAEENDDLCS ICADGGDLLC
0701: CDNCPRAFHA ECVCLPSIPT GTWYCKYCEN MFAKERFVEN NANAIAAGRV AGVDAIEQIT RRCIRMVETL ETEVSVCVLC RDQDFSKSGF GPRTVIICDQ
0801: CEKEYHVGCL KEHNIDDLQE LPKDKWFCCT DCSRIHFALE KVVSDGEQNI PESLLKVLKE KNEGKGSVNN SSLDIKWRLL SGKMSSEETR VWLSSAVSIF
0901: HEQFDPIADA STSRLDLIPH MVYGRSFKDQ DYGGMFCAIL LVNSLVVSAG IFRVFGKEVA ELPLVATSTN CQGQGYFQSL FSCMENLLQS LKVENLVLPS
1001: AEEAEAIWTN RFSFTKIPEE QMKQYRKNYQ MMVFSGTSML QKQVGGSQRD EDNFTLGDA
0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.