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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH26543 Soybean nucleus 88.28 90.53
KRG96074 Soybean nucleus 29.89 51.28
CDX71404 Canola extracellular, golgi, vacuole 25.22 49.51
VIT_06s0061g00840.t01 Wine grape nucleus 39.23 47.94
GSMUA_AchrUn_... Banana nucleus 38.53 47.61
Zm00001d045631_P002 Maize cytosol 13.01 47.12
HORVU7Hr1G122600.9 Barley cytosol, nucleus 32.37 43.58
KRH32595 Soybean nucleus 33.47 43.21
GSMUA_Achr4P12040_001 Banana nucleus 36.84 42.4
KRH19970 Soybean nucleus 27.81 42.04
KXG20990 Sorghum nucleus 36.64 41.51
CDY04521 Canola nucleus 38.43 40.44
CDX77146 Canola nucleus 36.35 39.7
Bra011988.1-P Field mustard nucleus 38.93 39.08
CDY30516 Canola nucleus 40.42 38.8
AT2G27980.1 Thale cress cytosol, plastid 41.21 38.71
PGSC0003DMT400001219 Potato nucleus 40.42 38.43
Zm00001d014909_P003 Maize nucleus 35.35 38.2
TraesCS7A01G569600.1 Wheat nucleus, plastid 35.55 38.09
Bra034381.1-P Field mustard nucleus 40.12 37.76
Solyc11g066480.1.1 Tomato nucleus 39.42 37.31
KXG19082 Sorghum nucleus 31.58 34.87
TraesCS7B01G489100.1 Wheat nucleus, plastid 35.85 34.55
KRH19715 Soybean nucleus 30.19 34.2
Zm00001d035862_P003 Maize nucleus 33.47 34.18
KRH32312 Soybean nucleus 30.19 34.12
Os06t0101000-01 Rice nucleus, plastid 33.96 33.37
TraesCS7D01G543000.1 Wheat nucleus 36.05 32.76
TraesCS7A01G002000.1 Wheat nucleus 31.68 32.42
TraesCS4A01G498600.2 Wheat nucleus, plastid 33.86 29.47
Zm00001d045629_P002 Maize plastid 19.86 26.28
KRH52096 Soybean nucleus 13.01 21.69
KRH67232 Soybean nucleus 12.21 19.49
KRH30259 Soybean nucleus 14.7 15.63
KRH72700 Soybean nucleus 15.89 14.56
KRH17051 Soybean nucleus 15.19 14.5
KRH77859 Soybean nucleus 15.59 14.27
KRH27632 Soybean nucleus 12.91 13.99
KRH30263 Soybean nucleus 15.59 13.53
KRH27635 Soybean nucleus 16.88 12.98
KRH77858 Soybean nucleus 16.68 12.74
KRH71410 Soybean nucleus 14.5 12.37
KRH27633 Soybean cytosol, nucleus 3.77 11.41
KRH27324 Soybean nucleus 14.8 11.37
KRH21991 Soybean nucleus 14.4 11.04
Protein Annotations
EntrezGene:100804381MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30EMBL:ACUP02008437InterPro:Acyl_CoA_acyltransferase
EnsemblPlantsGene:GLYMA_13G321400GO:GO:0003674GO:GO:0005488GO:GO:0046872UniProt:I1M4F6InterPro:IPR013083
InterPro:IPR019787InterPro:JasEnsemblPlants:KRH22815ProteinID:KRH22815ProteinID:KRH22815.1PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF12SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903UniParc:UPI0002966A5FInterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
hypothetical protein
Coordinates
chr13:+:41583359..41590443
Molecular Weight (calculated)
111016.0 Da
IEP (calculated)
5.087
GRAVY (calculated)
-0.439
Length
1007 amino acids
Sequence
(BLAST)
0001: MAKGADSDEF VVLSRVRTGL KREFAFAMKA QSEICGGSLG RTRASKNRVE APVQPASARK RSRKSEEPKT SEDAMSEEEV KSDVVDLQSD DNNHVGESES
0101: AAMQVCEEEP KMLEPKPEPV ISEEEPKVLD DVINEEEAVV AETLKGEEPI VAETLKEEVV DEMAEQPLCK EESEKGVSDE MAEQPLCEEE SEKGVSDEMA
0201: EQPLCEEEPE KGGVSEEKDS NGVALALVND DGDEGNKKKR RMKKRLEMPQ SERRFTRSAL KVKSEETNDV EHVGVAGIDD DGVKGETEAS AEASLLMTPP
0301: SSAKFSNSRL KKFPSKLKDL LATGILEGLP VMYMKGAKTR WKAGEKGLQG VIQDSGVLCF CKICNGVEVV TPTVFELHAG SANKRPPEYI YIHDGNCGKT
0401: LRDVMNACCC CDFPLESMDE AVQKLLGDFT MKKSSICLNC RGACKGVSKL VCDLCLASPP QTAMASRKVI SQPVQPRSPE PVVIQKSLDN EVQPNSLDNE
0501: VPPNSLDNEV QPNSLDTGVQ PKSFSNGMKH SASRGKSQGR LTRKDLRLHK LVFEADVLPD GTELAYYAHG QKLLVGYKKG CGIFCTCCNE QVSASQFEAH
0601: AGWASRRKPY LHIYTSNGIS LHELSISLSK DHRRFSNNDN DDLCIICEDG GDLLCCDGCP RAFHIDCVPL PCIPSGSWYC KYCQNVFQKD RHGQHEVNAL
0701: AAAGRIAGPD ILELMNKRCI RVVKTVEVDH GGCALCSRPN FSKSFGPRTV IICDQCEKEY HVGCLKEHNM ENLEKLPEGN WFCSGNCSHI HTALTDLVAS
0801: KEKDVPDPLL SLIKKKHEEK SLEIGAGLDV KWRVMNWKLD SDSDDSVETR KLLSKAVAIF HERFDPIVDS TSGRDFIPTM LFGRNIRGQD FSGIYCAVLT
0901: VNGDIVSAGV FRVFGSEIAE LPLVATTADH QGQGYFQCLF SCIETLLGSL NVKNLVLPAA DEAESIWTGK FGFTKLPQDE INKYKKFYRM MIFQGTSVLQ
1001: KPVPETL
Best Arabidopsis Sequence Match ( AT2G27980.1 )
(BLAST)
0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.