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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:plastid
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH27635 Soybean nucleus 91.28 91.91
KRH27633 Soybean cytosol, nucleus 22.44 88.89
KRH77859 Soybean nucleus 72.78 87.27
KRH27632 Soybean nucleus 61.18 86.87
Bra020653.1-P Field mustard nucleus 21.68 48.23
VIT_05s0020g03420.t01 Wine grape nucleus 50.8 46.79
Solyc03g005170.2.1 Tomato nucleus 38.89 46.47
AT4G14920.3 Thale cress nucleus 39.12 45.3
CDY10104 Canola nucleus 32.75 43.99
AT1G05380.3 Thale cress nucleus 37.3 43.23
CDY47291 Canola nucleus 34.65 42.51
GSMUA_Achr4P21300_001 Banana nucleus 26.23 42.25
Solyc09g076010.2.1 Tomato nucleus 42.53 41.13
KRH67232 Soybean nucleus 19.11 39.94
Os03t0747600-02 Rice nucleus 23.05 39.74
KRH71410 Soybean nucleus 29.26 32.71
GSMUA_Achr5P02880_001 Banana nucleus 29.64 26.6
EER95921 Sorghum nucleus 28.66 25.87
KRH52096 Soybean nucleus 11.83 25.83
TraesCS5D01G396100.1 Wheat nucleus 26.84 25.82
OQU90997 Sorghum nucleus 26.84 25.69
TraesCS2A01G235700.1 Wheat nucleus 29.11 25.62
TraesCS2B01G257600.3 Wheat nucleus 29.04 25.6
TraesCS2D01G238100.1 Wheat nucleus 29.04 25.57
HORVU5Hr1G094760.8 Barley nucleus 25.93 25.33
TraesCS5A01G386300.1 Wheat nucleus 26.16 25.16
TraesCS5B01G391200.1 Wheat nucleus 26.54 25.04
HORVU2Hr1G054040.7 Barley nucleus 27.14 24.55
KRG96074 Soybean nucleus 9.48 21.29
KRH30259 Soybean nucleus 15.09 21.01
KRH21991 Soybean nucleus 20.39 20.47
KRH32595 Soybean nucleus 11.83 20.0
KRH27324 Soybean nucleus 19.64 19.76
Os07t0173400-01 Rice cytosol 7.35 19.32
KRH72700 Soybean nucleus 16.0 19.2
KRH17051 Soybean nucleus 15.16 18.96
KRH19970 Soybean nucleus 9.33 18.47
KRH30263 Soybean nucleus 16.0 18.19
KRH26543 Soybean nucleus 12.81 17.21
KRH19715 Soybean nucleus 11.37 16.87
KRH22815 Soybean nucleus 12.74 16.68
KRH32312 Soybean nucleus 11.22 16.61
Zm00001d034422_P001 Maize cytosol 0.38 3.97
Os07t0173700-00 Rice plastid 0.38 3.38
Os07t0173501-00 Rice cytosol, extracellular 0.38 3.29
Protein Annotations
EntrezGene:100814247MapMan:15.5.30Gene3D:3.30.40.10EMBL:ACUP02000685InterPro:Acyl_CoA_acyltransferaseEnsemblPlantsGene:GLYMA_01G238200
GO:GO:0003674GO:GO:0005488GO:GO:0046872UniProt:I1JAT7InterPro:IPR013083InterPro:IPR019787
InterPro:JasEnsemblPlants:KRH77858ProteinID:KRH77858ProteinID:KRH77858.1PFAM:PF00628PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF10SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903UniParc:UPI00029638E0InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
hypothetical protein
Coordinates
chr1:-:56263630..56270645
Molecular Weight (calculated)
146556.0 Da
IEP (calculated)
7.141
GRAVY (calculated)
-0.719
Length
1319 amino acids
Sequence
(BLAST)
0001: MESGLRSGGS GVVVKSRNSS GCLIVRKKGD GLGATASTSR KLYESKKRPN INVSLSDSGS SEGSLIPPGR RLGPETIRVC NGLAASERGG TEISRKRDRV
0101: QRIKGNGEGI AAEKGLEQWE RKRSKLGVYD FDDYDGMDLE NMRRRHLDGH GGGSFMGSVH AARSGIDREF ITGSSVRILD KRKNSYGDRP SGLYLGDNVD
0201: HSRYKINRDG VWVPLRLQRE KFNSDESIRV QGKNGVLKVM VNKKKVGGPS EQDYDHHKPV EGRQRLKTEE TAKRLMTEET AKRLMTEETA KRLKTEEAAK
0301: RNVPIRPLSY LETKPVEKPG LLKRPENKRI ASRKSLSSKD SKGDEGDSDN SDTSLNLGIR NTEARKPAKN VMSEDEQTPV HEKLPTTRTK EGKIKRGSGT
0401: EKQKLRERIR EMLLNSGWTI DYRPRRNRDY LDAVYINPAG TAYWSIIKAY EALQKQLNED ANEAKPKGDS SSFAPIADEV LNQLTRKTRK KMEKELKKKK
0501: KYDSESDNEK EPQIRSASNK RDLNSTDGDN NEEKLSSFIK QGSKSMKNKM FEDTIMSASS KIQNATNHSG DGIEKSLFEC DPQIHGRKSK KHGRCTLLVR
0601: SSKKGSNSES DGFVPYMGKR TVLSWLIDSG TVELSQKVQY RRRKKVMLEG WITRDGIHCG CCSKILTVSK FELHAGSKLP QPYQNIYLES GVSLLQCQIE
0701: AWNRQEHSEK ICFHSVDIDG DDPNDDTCGI CGDGGDLICC DGCPSTFHQS CLDIQMLPLG EWHCPNCTCK FCGIASGNSE KDDASVYVLQ ICNLCEKKYH
0801: DSCTKEMDNL PNNINTSSLS FCGKECKELS EHLKKYLGTK HELEAGFSWS LIHRIDEDSE AACRGISQRV ECNSKLAIAL TVMDECFLPV IDRRSGINLI
0901: RNVLYNSGSN FSRLNYSGFY TATLERGDEI IASASIRFHG TQIAEMPFIG TRHMYRRQGM CRRLFSAIES TLCSLKVEKL VIPAIAELTN TWTTVFGFTH
1001: LDESLRQEMK SLNMMVFPGI DMLMKPLAEQ GNHEGNKTTG SEKLENGDND FIKTKMENKS DMGSSTPQDP HGSDDISSSL ANEMNDECSD ASQELNNQVL
1101: VDGIICSKSH SGEMMSDPVS DKCISPSRTS HSELEMKNKV VAAPPVDRLN SSAKCQSISP IDTSVSSHPV DILKVLVQET TCSDPCPAEE NLDKKCHSST
1201: AMNCDSSELD INPVLDSEMA NNTLPTKEVC MNDTLEVVPS GNISEENIIK GNNRNVGESS SALNHADESL LQVGSVSNGE IGCENEKDLR LNPIVASNEM
1301: YFDESGINAF GDSSETVLV
Best Arabidopsis Sequence Match ( AT4G14920.2 )
(BLAST)
0001: MDRGGRRSGE SPGVLIKKRS SSGCLIVKKN DGVGRICSFS ESRPNWESNK RSRMITSDSE SSDRFTIPRN MRQYRNVEES RFGWKRDCVE GKGDDCFVGN
0101: SREWKESKRH RLDDDDDNDD DEESEDELMA MRMRRSFDGS GVDIGKKAYL GSAHFANDRE YGTGSSRKGL DIEKRRKPYL DGSGNIGFGN QGYRNRCKVS
0201: GNEAKTTHAL LLQKKYKRDM NFDEPIRVQG KNGVLKVMVN KQNKIGGLLQ NAKAEQTQCG STIQETGKIR VAIQLPNTLK TEKLPKLPPP ARIQSNGLKL
0301: PMSLTMKSKG QNQDSEDSDS SGRLQKRIIQ PHKPSQMSST GGEKTLPEAS MPSKIRDGKI RRGSGTEKQR LRERIREMLL EAGWTIDYRP RRNRDYLDAV
0401: YISPRGTAYW SIIKAYEALL KQLNSGEKVA KPCDDSSTFS LISDEILSQL TRKTKSKIEK DMKRELHSAS DSDGKATFAR NFLAIKNEVG NDDRYVHKQQ
0501: RNVMSVKNEV NSRDSSQGTT SKSESPLHHQ TEKSTGSSSH RVDGGKSSKH GRSTLLVRRS VRGDNSESDG FVPSSEKRTV LAWLIDSGTL QLSEKVMYMN
0601: QRRTRAMLEG WITRDGIHCG CCSKILAVSK FEIHAGSKLR QPFQNIFLNS GVSLLQCQID AWDKQKGAGN IGFCSVDVIA DDPNDDACGI CGDGGDLVCC
0701: DGCPSTFHQR CLDIRMFPLG DWHCPNCTCK FCKAVIEDVT QTVGANTCKM CEKKYHKSCM PKANVTPADT TEPITSFCGK KCKALSEGVK KYVGVKHELE
0801: AGFSWSLVHR ECTNSDLSLS GHPHIVENNS KLALALTVMD ECFLPIIDRR SGVNIVQNVL YNCGSNFNRL NFGGFYTALL ERGDEIVASA SIRFHGNRLA
0901: EMPFIGTRHV YRHQGMCRRL FSVVESALQH LKVKLLIIPA TADFSHVWIS KFGFRQVEDS LKKEMRSMNL LTFPGIDVLQ KELLAPRHTE SAVDTDCDPC
1001: NEGTNSAIKT NEVSVLETTS PSRDKPVSDY LVEHQPYEDV SSASRDSLVH DGYPKMLETA FKTSTMARSS DMEKHMDCKT SYSRFDGEDE EDSLIESPPQ
1101: RNSDMAFLDH IIRSPVDTGA TENRDVYGSG DDDSPETQ
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT4G14920]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.