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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS5D01G396100.1 Wheat nucleus 86.15 84.83
TraesCS5A01G386300.1 Wheat nucleus 85.78 84.46
TraesCS5B01G391200.1 Wheat nucleus 85.93 82.98
Os03t0747600-02 Rice nucleus 37.19 65.62
OQU90997 Sorghum nucleus 56.59 55.44
Zm00001d013278_P004 Maize nucleus 54.81 50.89
Zm00001d034004_P004 Maize nucleus 53.93 49.46
GSMUA_Achr4P21300_001 Banana nucleus 24.74 40.78
Bra020653.1-P Field mustard nucleus 14.44 32.88
KRH27632 Soybean nucleus 21.56 31.32
Solyc03g005170.2.1 Tomato nucleus 23.26 28.44
CDY10104 Canola nucleus 20.44 28.11
KRH77859 Soybean nucleus 22.67 27.82
CDY47291 Canola nucleus 21.41 26.88
AT1G05380.3 Thale cress nucleus 22.52 26.71
CDX74615 Canola nucleus 19.7 26.65
AT4G14920.3 Thale cress nucleus 22.3 26.43
KRH77858 Soybean nucleus 25.33 25.93
KRH27635 Soybean nucleus 25.04 25.8
Bra035350.1-P Field mustard nucleus 20.0 25.69
CDY37657 Canola nucleus 20.15 25.54
VIT_05s0020g03420.t01 Wine grape nucleus 26.37 24.86
AT5G36740.1 Thale cress nucleus 21.33 24.64
Solyc09g076010.2.1 Tomato nucleus 24.15 23.9
AT5G36670.1 Thale cress nucleus 20.89 23.64
GSMUA_Achr5P02880_001 Banana nucleus 25.56 23.47
Solyc09g065340.2.1 Tomato nucleus 23.41 23.24
KRH71410 Soybean nucleus 19.56 22.37
HORVU4Hr1G056300.1 Barley extracellular 2.89 21.55
HORVU2Hr1G054040.7 Barley nucleus 22.0 20.37
VIT_07s0151g00870.t01 Wine grape nucleus 21.48 17.96
HORVU7Hr1G122600.9 Barley cytosol, nucleus 8.89 16.04
KRH27633 Soybean cytosol, nucleus 3.93 15.92
HORVU2Hr1G126690.2 Barley nucleus 15.41 13.08
HORVU2Hr1G075850.12 Barley cytosol, nucleus 13.7 12.24
HORVU4Hr1G059010.32 Barley plastid 8.74 12.16
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10UniProt:A0A287SBV2InterPro:Acyl_CoA_acyltransferasencoils:CoilGO:GO:0003674
GO:GO:0003824GO:GO:0005488GO:GO:0008080GO:GO:0016740GO:GO:0046872EnsemblPlantsGene:HORVU5Hr1G094760
EnsemblPlants:HORVU5Hr1G094760.8InterPro:IPR013083InterPro:IPR019787InterPro:JasPFAM:PF00628PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF14SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903UniParc:UPI000B4642C9InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
No Description!
Coordinates
chrchr5H:+:596966550..596974998
Molecular Weight (calculated)
145353.0 Da
IEP (calculated)
6.713
GRAVY (calculated)
-0.711
Length
1350 amino acids
Sequence
(BLAST)
0001: MRHNGLERSP MPGIEDALMK DSPKASSLEV ENPSLADFDH LGGGPTLAGK KRKDVPGGEN GGVTKRVLRS DTMKLHVDAE PEGEAAAAAV DVSGADSLEK
0101: TDCGEAIAGD SLDKTGCGEA IAGDSLEKTN CEAVAGDSSE EANCEAIAEE GGSGLQTVDA CEGDDEHMDE VPVKVDDAIE VPDKCYEDNV ESLGVAEENG
0201: LDSQQSNSES DDKREKADEK IHSATQEEEN VSAAATTGGC TDDSQENKAA NGPCQGEVID PSTAANDDEL GIGVSTKSPT SASEPVEQDD TVVRTEGMVL
0301: HSGDQGVEKH RHNDDVPIDT GTSLIENGRC VADNHITLTD CTNQKGGLGS PVHRTKGFST PDIVFIRRRS LTRNSCEMKQ VKPEEEEVQF ERRVTRSSTV
0401: RQREASGSSC KSTANAASME SKGRKEDVVH YRRKVSNTAS LKADHTEPAK RGTSTKNNTL NGKVTAQRIS SVTGNDYPAN ITENKASAAE IKINSKPQPS
0501: TRSGGIAKAT TKDAVSLVDQ NVCSSAFTEK NDTELTDSEG VRSENKTAVP KSPLSVGAKI VASKKRMLES GLDKTAGGSP VEMPSMKKTR STSHTELDQS
0601: KKSSGKMATE KHSSSDKKDI LTKQQHHSRA AELSRSVNPS NKDASKLSHN GSDVDGTDIN ITHKRNCRGR RERPPVLIKQ EYSSESEEVI VVRKDRRKRK
0701: GPMRKQRSGS RPDHSSGSPK ASNSKGNRKT KYGSKEKSGN PGEPTCALSE KRKISEQIKA ILLDAGWKID LRPRNGRDYL DSVYIPPTGK GSYWSITKAY
0801: AIYQSMQSEQ KDEAASENLS KKSPGSPGKI HASTVSSLPE EILSKLKRVV VNKRKTKIEL QKSKKRKHGL LKNSKNLKGR PKEKKKISKE RKKRGGCALL
0901: ARGSNQEAGS SNGFAPYEWK RTVFSWLIDL DVLSVNARLK CMDESRSKVL LEGLITRDGI NCSCCSKVVT VLEFVAHGGG QLSKPYRNIL VDGLDNDLLH
1001: CLIIAWDKQS DSERQAFFPV STEGDDPNDD TCGICGDGGN LICCDGCPST FHMSCLELEE LPSDDWRCTN CSCKFCHEHL NHDVPDNAEI DPLHSCSQCE
1101: KKYHPSCSPE TEKLSSVSSQ AGNHFCQQSC RLLFEELQNL LAVEKDLGPE YACRIIQCIH EDAPETVLDL DGRVECNSKI AVALSLMDEC FLPIVDQRTG
1201: INLIRNVVYN CGSNFLRLDF RGFYIFILER GDEIVSAASV RIHGTKLAEM PFIGTRHMYR RQGMCRRLLD GIEMILSSLK VEKLIXXXXX XXXXXXXXXX
1301: XFSPLEVSDK QEVKSINMLV FPGTGLLQKS LLNKQASPQE HPGSEGGQHK
Best Arabidopsis Sequence Match ( AT1G05380.2 )
(BLAST)
0001: MEGGGGSGER SRIASNTPRS LKEKSDGVGR TVSSTETRQN YQKRSRMVVS DSESSDEFMK PPPRRSGVDR KTLGAKEKFV RKRDRVEHDR NGYVRRNNEA
0101: SGSFMKMNKL DIFEFDEYDG FDSANLMRKR FDNGSVGVRG RSSFASRRVD SSVGRSGSGR EGLFDRRRNT FVNGTCSASS QEDSSSESDS DEPMRVQGIN
0201: GVLKVKVNNK TNTLAASINP RDAEIYERPP SSRKAQRREN VVVKPPFRKS NNVDNNSESE ESDMSRKSKR KKSEYSKPKK EFNTKSKSTF PELVNPDVRE
0301: ERRGRRGGGT DKQRLRERIK GMLTDAGWTI DYKPRRNQSY LDAVYVNPSG TAYWSIIKAY DALLKQLKDE GVDARPRKDT AAVASVSEEI VNKLARKAKK
0401: TRSEMTKKWK QNSSGSDSEN KSEGGAYTDT SEERIRSSIK LGGKSTKKGR NGADWDELHK KSKRSLYYNN ARPSCGSDSH YLHGRKTKKI GRCTLLVRSS
0501: KDKKNPAING FNPYSGKRTL LSWLIESGVV QLRQKVQYMR RRGAKVMLEG WITREGIHCD CCSKILTVSR FEIHAGSKSC QPFQNIYLES GASLLQCQVR
0601: AWNMQKDATN LALHQVDTDG DDPNDDACGI CGDGGDLICC DGCPSTYHQN CLGMQVLPSG DWHCPNCTCK FCDAAVASGG KDGNFISLLS CGMCERRYHQ
0701: LCLNDEAHKV QSFGSASSFC GPKCLELFEK LQKYLGVKTE IEGGYSWSLI HRVDTDSDTN SQMSAQRIEN NSKLAVGLAI MDECFLPIVD RRSGVDLIRN
0801: VLYNCGSNFN RINYTGFYTA ILERGDEIIS AASLRFHGMQ LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFTPLD
0901: DSVRKEMRSL NTLVFPGIDM LQKPLLHEEN IIAPAAAGDA MISEVETEKK SEFTSSVEIG PYAVEGDEFV ADAANCYKDI LASDEDNILV SVETAMGTIC
1001: KPKDELSRHF RGEESGISSS PCQITLKSGT KHVLGHICDD TGSSCEDGLT DVNVEADASL LSQEIQQASA SFKVENNLSL SISGRGSSDL SSISQEVKSE
1101: QTSSNLDGVP SCKDYNILVP GAKLDKSKDD AFADGFLL
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW00]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.