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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 5
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH67232 Soybean nucleus 22.46 42.0
GSMUA_Achr4P21300_001 Banana nucleus 28.47 41.03
Os03t0747600-02 Rice nucleus 22.71 35.03
KRH77859 Soybean nucleus 31.1 33.36
KRH27632 Soybean nucleus 25.42 32.29
CDX74615 Canola nucleus 26.1 30.86
KRH77858 Soybean nucleus 32.71 29.26
CDY37657 Canola nucleus 26.19 29.01
KRH27635 Soybean nucleus 32.03 28.86
Bra035350.1-P Field mustard nucleus 25.51 28.64
AT5G36740.1 Thale cress nucleus 27.03 27.29
GSMUA_Achr5P02880_001 Banana nucleus 32.97 26.46
AT5G36670.1 Thale cress nucleus 26.1 25.82
Solyc09g065340.2.1 Tomato nucleus 29.07 25.22
KRH27633 Soybean cytosol, nucleus 6.78 24.02
KRH52096 Soybean nucleus 12.2 23.84
VIT_07s0151g00870.t01 Wine grape nucleus 31.44 22.97
TraesCS2A01G235700.1 Wheat nucleus 27.88 21.95
TraesCS2B01G257600.3 Wheat nucleus 27.71 21.86
TraesCS2D01G238100.1 Wheat nucleus 27.63 21.76
HORVU2Hr1G054040.7 Barley nucleus 26.44 21.4
KRG96074 Soybean nucleus 10.59 21.29
EER95921 Sorghum nucleus 26.1 21.08
TraesCS5D01G396100.1 Wheat nucleus 24.15 20.79
TraesCS5A01G386300.1 Wheat nucleus 23.9 20.57
TraesCS5B01G391200.1 Wheat nucleus 24.24 20.46
OQU90997 Sorghum nucleus 23.47 20.1
HORVU5Hr1G094760.8 Barley nucleus 22.37 19.56
KRH30259 Soybean nucleus 14.92 18.59
KRH21991 Soybean nucleus 20.08 18.04
KRH27324 Soybean nucleus 19.92 17.93
KRH32595 Soybean nucleus 11.44 17.31
KRH72700 Soybean nucleus 15.68 16.83
KRH17051 Soybean nucleus 14.75 16.49
KRH30263 Soybean nucleus 15.76 16.03
KRH32312 Soybean nucleus 11.69 15.49
KRH19715 Soybean nucleus 11.61 15.41
KRH19970 Soybean nucleus 8.56 15.17
KRH26543 Soybean nucleus 12.54 15.07
KRH22815 Soybean nucleus 12.37 14.5
Os07t0173400-01 Rice cytosol 6.1 14.34
Zm00001d034422_P001 Maize cytosol 0.17 1.59
Os07t0173700-00 Rice plastid 0.17 1.35
Os07t0173501-00 Rice cytosol, extracellular 0.17 1.32
Protein Annotations
EntrezGene:100784172MapMan:15.5.30Gene3D:3.30.40.10EMBL:ACUP02000898InterPro:AT_hook_DNA-bd_motifEnsemblPlantsGene:GLYMA_02G146500
InterPro:GNAT_domGO:GO:0003674GO:GO:0003676GO:GO:0003677GO:GO:0003824GO:GO:0005488
GO:GO:0008080GO:GO:0016740GO:GO:0046872UniProt:I1JF96InterPro:IPR000182InterPro:IPR013083
InterPro:IPR019787InterPro:JasEnsemblPlants:KRH71410ProteinID:KRH71410ProteinID:KRH71410.1PFAM:PF16135
PFscan:PS50016PFscan:PS51186PANTHER:PTHR42672PANTHER:PTHR42672:SF16SMART:SM00249SMART:SM00384
SUPFAM:SSF57903UniParc:UPI0002336D4CInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHD
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:15115758..15124151
Molecular Weight (calculated)
129840.0 Da
IEP (calculated)
7.333
GRAVY (calculated)
-0.655
Length
1180 amino acids
Sequence
(BLAST)
0001: MREGLRSRTR LGTASGGEGV DHKKTVAVKS EAVDLGDEGL EVQKSTIEKK GEVECGVKQE CGFDLNVSPS ADVDLAEDGS GKSCLNGGGS ILVAEEDRKA
0101: KKKHDSNDGV LVGGRVLRPR SKSGDCKRLY YGENDDVVSG DNGEHSGCER VKVKKEHEEA DDFLADSCEK EIIKPKKEGD GRRKLKRKRG RPPKIDLKGE
0201: DEPGDQLPRK RGRPPLAGRQ NHLVTVVTHN RKGKATLRKG KKGLTKSDGA KVNAIGDTNS RNSTGGELEK KEDSLVKRNA VKQLVRDQIK EQLSAAGWTV
0301: DFRPRNGREY HDAVYVSLDG HTHWSITLAY KRLKEYYEAG NGEGKAYKPG FKFTPIAEED FKMLTKVMNK QRKKGGKGGK KVDGVNGKKN KEKSGYGAGM
0401: GKSMKRKMKR KTSPNRMPVV RDHKRQKTQN KKRCAPLARN AEEIDSETEG YVLYCGKRTL LAWMIDSGTV LQNGKVHYMP HKSKSAVLDG EITGNGIHCG
0501: CCDKIFTISD FELHAGSKLA DPLKNIYVGE GTSLLQCLLD SWNKQDESER KGFHFVDVAG EDPNDDTCGV CGDGGDLICC DGCPSTFHQG CLDIKKFPSG
0601: DWHCIYCCCK FCGSVSGSSN QRDDNDELIV SKLLTCQLCE EKYHRSCIEA NDANTDDSRD VFFCGNRCQE LSERLEMLLG VKHEMEDGYS WTFIRRSDVG
0701: FDASQIKPQM VECNSKLAVA VSIMDECFMP YIDHRSGINL IHSILYNRGS NFNRLNYSGF VTAILERGDE IISAASIRIR GNQLAEMPFI GTRYMYRRQG
0801: MCRRLLNAVE WGLGSLNVEL LVIPAISELR ETWTSVFGFE SLESTSKQIL HNKNLLVFPH VDMLQKKISK HKLAGQNLNP SEGQINDETI SIESGCHLPD
0901: GSLNKVPDIA SNAKDHRKSS TDDTCQVVCQ AAPEILVMED NNSIENARDY VTGTCCRAGD SQLNSCWVPC EERQCLTSCI RSEATEGNCV SVSLEVTENF
1001: LNQVKVANEA ISNSSAENSA SCGAERIPLD SQIAFDTRDS KDSGDSIHQD SYKISDSCEL RSKTDCGEPN FIGTKEVHAE PVRVSGFHSR PKGDCASCEA
1101: ASATNVLIHL RSQKITDNKP WMNGTSELAD PDLQVDQTAR NSAPSLWSPN TASGAALHWA SAGSASRGST EGIVLSNQAS
Best Arabidopsis Sequence Match ( AT5G36740.5 )
(BLAST)
0001: MLETNEQKGF DLNVCASIED FSESDIKAEG ETDSLVDGNV ENVIEIKDKK KVIEREILIT RRVLRSGSVA RDLVNSDKHC KAVKRKGNVV SGGSSVDEVK
0101: EEVKQECVKS LVPEEIRGDD FRSEVKVESK DDRSDDGKEE KVQRKRGRPR KFGMSSQSDD NGLISNCKLR TSLGKKKELV GDDNVEKLVG GSCFNKEKAE
0201: VKLEHGEYAE DKEILGLDFR SQVKVEIKDD ECGIVELHDE ELQVKRKRGR PRKVQISSQS DESRPNTNCK LARTPELSSQ SSVDRISLSR LRGRPPKTKE
0301: TSVSLYIEKG PESNGRRMVR KRGRPPTPQK KRKSGMTDES DWKAKKRLKL CESPLESRHN NPLIDDERMI GEQRSKQTEA GGHSRSKSKK MLSDRILQLL
0401: LTAGWTVEYR PRNGRAYQDA VYLNPEGKTH WSVTKAYQVY KKQLESNPND QKNSTTGSGF GLLPEEDLHL LERTIQKKRS DTGKQRSKLK DRDTNDILVS
0501: TKGTGKIKRE EKHSRKRCTP SARSSLKDVD SKEDGYILFE GKRTMLGWMI DSTIVPLNGK VQCMDCKKTD ILLEGIITKE GIRCNCCDEV FSVLDFEVHA
0601: GGNRNQPFKS LYLEGGNSLL QCLHESMNKQ SESQLKGYHF VDFGSGDPND DTCGICGDGG DLICCDGCPS TFHQSCLDIK KFPSGAWYCY NCSCKFCEKD
0701: EAAKHETSTL PSLSSCRLCE EKYHQACINQ DGTVPGERST DSFCGKYCQE LFEELQLFIG VKHPLPEGFS WSFLRRFELP SEVADCDISE KIAYNAKMAV
0801: AFSVMDECFS PLVDHRSGVN LLQNIVYNFG SNFHRLDFSS FLTAVLERGD EIIAVASIRI HGNQLAEMPF IGTRYMYRRQ GMCRRLMDGI ESALGSLKVD
0901: KLVIPAVPEL IDTWTSGFGF APVNDSEKKT IKNLNLLVFP GVDMLGKSLV KEKITDSVVS SPNGLVLLAP EMTLPVDVEE NKPEESKDSA HERNCATAGV
1001: ESPSNPVDSC LKLTYVEEGD NDRESNLKLL DGSVEEKEDT KKLTDIDINS LPDEVDDSHA DQSDTKEQEI DDKEDKTPLS DDGCEGKAEG TKESNQQPDS
1101: NKVDNSQPLG NGGTGEELGN RTLALKREVT PTLRASPRLI QRSWRTSRVN QKFTGTTNAV LLDSPHRCV
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT5G36740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.