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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH19970 Soybean nucleus 80.38 94.14
KRG96074 Soybean nucleus 56.28 74.79
VIT_08s0007g04490.t01 Wine grape mitochondrion 36.67 60.85
CDY68599 Canola cytosol 17.44 49.1
Solyc10g083800.1.1 Tomato nucleus 52.56 45.25
Solyc09g008520.2.1 Tomato nucleus 51.03 42.8
PGSC0003DMT400072425 Potato nucleus 42.05 42.76
PGSC0003DMT400009969 Potato nucleus 51.28 42.46
AT2G36720.1 Thale cress cytosol 48.08 37.24
CDY63985 Canola nucleus 47.69 36.33
Bra017226.1-P Field mustard nucleus 48.08 35.99
KRH32312 Soybean nucleus 39.23 34.34
KRH19715 Soybean nucleus 39.1 34.31
KRH26543 Soybean nucleus 43.08 34.22
KRH22815 Soybean nucleus 43.21 33.47
CDY70414 Canola cytosol, nucleus 24.49 30.03
KRH52096 Soybean nucleus 17.95 23.18
KRH67232 Soybean nucleus 15.26 18.86
KRH30259 Soybean nucleus 18.46 15.21
KRH17051 Soybean nucleus 18.33 13.55
KRH77859 Soybean nucleus 18.97 13.45
KRH72700 Soybean nucleus 18.59 13.19
KRH27632 Soybean nucleus 15.64 13.13
KRH30263 Soybean nucleus 19.36 13.02
KRH27635 Soybean nucleus 20.13 11.98
KRH77858 Soybean nucleus 20.0 11.83
KRH71410 Soybean nucleus 17.31 11.44
KRH21991 Soybean nucleus 17.95 10.65
KRH27324 Soybean nucleus 17.82 10.6
KRH27633 Soybean cytosol, nucleus 4.1 9.61
Protein Annotations
EntrezGene:100798276MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30EMBL:ACUP02006136InterPro:Acyl_CoA_acyltransferase
EnsemblPlantsGene:GLYMA_10G062700GO:GO:0003674GO:GO:0005488GO:GO:0046872InterPro:IPR013083InterPro:IPR019787
InterPro:JasUniProt:K7LHQ9EnsemblPlants:KRH32595ProteinID:KRH32595ProteinID:KRH32595.1PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF12SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903UniParc:UPI0002962206InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
hypothetical protein
Coordinates
chr10:-:5903310..5914904
Molecular Weight (calculated)
87603.3 Da
IEP (calculated)
8.713
GRAVY (calculated)
-0.269
Length
780 amino acids
Sequence
(BLAST)
001: MESTATTVSP DSENDTTNTR VNGYVVYTRR KRTLLTLHSG NDAAKRLRTA EIKVEARNDD DDVVFKRPKL ESELTEEELK TTSSSKKIIV VHKKPATVKE
101: LFQTGLLDGV PVVYVGCKKD STTELRGEIK DGGILCSCSL CNGRRVIPPS QFEIHACNIY KRAAQYICLE NGKSMLELMR ACRAAPLHTL EATIQNFINS
201: PPEEKYFTCK NCRGCFPSSN VERVGLLCLS CVESRKSEKS SIHAVGKRIR SPRPVLFSRS CSCCASESEL CITPQTKKQW KTRTKSSKLS VKLKTAPITS
301: KCLSPQNKSQ WRISKRYQRL HKLIFEEDGL PNGAEVAYYA RGQKLLEGIK TCSGIVCRCC NTEISPSQFE VHAGWASRRK PYAFIYTSNG VSLHELAIFL
401: SKDHKCTTKQ NDYVCVVCWD GGNLLLCDGC PRAFHKECAS VSSIPRGEWY CQICQHTFLR ERPVLHNADA VAAGRVEGVD PIEQIAKRCI RIVKDIGAEM
501: GGCVLCRSSD FSRSGFGPRT IIICDQCEKE YHVGCLRDHK MAYLKELPEG DWFCCNDCTR IHSTLENLLI RVAERLPESL LDVIKKKQVG RCLEPLNEID
601: VRWKLLNGKI ASPETRPLLL EAVSMFHECF DPIVDPAAGR DLIPAMVYGR NLQTQDFGGM YCALLIVNSS VVSAGMVRIF GRDIAELPLV ATRYKNRGKG
701: YFQTLFACIE RLLAFLNVKN LVLPAAEEAA SIWTEKFGFS KMKPNQLTNY RMNCHQIMAF KGTNMLHKTV PQCRVINTQL
Best Arabidopsis Sequence Match ( AT2G36720.2 )
(BLAST)
0001: MKEDLVPESN SSVWQSPVKR LAVDGECGEA GDRSRTSCKR IKTTQVNGFI VYTRTRKTKF TKLHEQEDEN AGLSNHLEES KPTSGVTSGF GGDMCRSSSV
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8RWG0]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.