Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400072425 | Potato | nucleus | 82.56 | 97.52 |
| Solyc09g008520.2.1 | Tomato | nucleus | 69.87 | 68.06 |
| VIT_08s0007g04490.t01 | Wine grape | mitochondrion | 34.55 | 66.6 |
| KRG96074 | Soybean | nucleus | 38.19 | 58.94 |
| CDY68599 | Canola | cytosol | 16.23 | 53.07 |
| KRH32595 | Soybean | nucleus | 45.25 | 52.56 |
| KRH19970 | Soybean | nucleus | 37.42 | 50.9 |
| AT2G36720.1 | Thale cress | cytosol | 43.27 | 38.93 |
| CDY63985 | Canola | nucleus | 41.83 | 37.01 |
| Bra017226.1-P | Field mustard | nucleus | 41.83 | 36.37 |
| Solyc11g066480.1.1 | Tomato | nucleus | 41.39 | 35.24 |
| CDY70414 | Canola | cytosol, nucleus | 20.97 | 29.87 |
| Solyc10g084650.1.1 | Tomato | nucleus | 33.44 | 22.46 |
| Solyc08g078120.1.1 | Tomato | nucleus | 8.39 | 18.63 |
| Solyc03g071550.1.1 | Tomato | nucleus | 15.56 | 14.64 |
| Solyc06g082050.1.1 | Tomato | nucleus | 5.41 | 14.41 |
| Solyc03g005170.2.1 | Tomato | nucleus | 17.0 | 13.95 |
| Solyc07g062600.2.1 | Tomato | nucleus | 15.12 | 12.01 |
| Solyc09g031580.2.1 | Tomato | nucleus | 15.67 | 11.71 |
| Solyc09g076010.2.1 | Tomato | nucleus | 17.33 | 11.51 |
| Solyc09g065340.2.1 | Tomato | nucleus | 16.67 | 11.1 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:K4D3G6 | PFAM:PF00628 |
| PFAM:PF16135 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF12 | SMART:SM00249 |
| SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc10g083800.1 | EnsemblPlants:Solyc10g083800.1.1 | UniParc:UPI000276A0B5 | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
No Description!
Coordinates
chr10:+:63552789..63563412
Molecular Weight (calculated)
100322.0 Da
IEP (calculated)
9.452
GRAVY (calculated)
-0.378
Length
906 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAKTNREFD ISSPAEEKPP AQYRVPETEP ETGDLNRRKP DEPQVKVSGS NGVVVYRRNK RRKTADSNRN SSGKVVNMDV TKGNLGISAN NGDVVEVEVK
101: EETRSKRLTR SALGRKRELL EITNGNSGGE VDEGSGVVIS GTPTKKLEMK MSKKISITVI PETVKELFET GLLEGYPVFY NGGKKGIPLR GTIKDTGILC
201: SCELCKGATV VPPSKFEIHA CNSYRRASEY ICLENGKSLL DVVKECRKGS LKTLEETIQS VIGPVPVKKS LFCRDCKGSF VATLAGNDEQ LCDSCIVSLR
301: SEATPTQSIN TENAVFEPVL NLNSSGTSNM SSVSLRSVKG RKKKKVAIKH SRRQSPSAHT LSRKKWKTPN KVTKPVFAPK SDETSITCSS FRNNMQGNIS
401: EKLSKSVLVT KYSKVASPGV SVHSRTQWKM TKRDQKMHRL VFEEGGLPEG TEVAYYSRGK KLLVGYKKGS GIFCSCCNTE VSPSQFEAHA GWASRKKPYG
501: YIYTSNGVSL HEFAISLLKG RKSSVKDSDD LCIICADGGK LVLCDGCPRA FHKECASLST IPRGKWYCKY CESMLQREKF AERNTNALAA GRISGIDPIE
601: QITNRCIRFV KNAEEAEFIA CVLCRAYDFS KSGFGPRTVI LCDQCEKEYH VGCLKKSKIA DLKELPKGKW FCSVDCKRIY CALQNLLNSG EERLPDSCLD
701: AGRVKEKHNS LVAVGELDVR WRLLSGRISS RETRRLLAEA VSIFHDGFDP IVDSVTGRDF IPSMVYGRNI RGQDFGGMYC AILTVNSTVI SAGILRIFGQ
801: DMAELPLVAT RVGSQGKGYF QLLFSCIEKL LAFLGVRRFV LPAAVEAMSI WTKKFGFEEL TPEQLVSYRK TCWQMISFKG TSMLEKMVPK CRIIKQGEGE
901: TDVPDE
101: EETRSKRLTR SALGRKRELL EITNGNSGGE VDEGSGVVIS GTPTKKLEMK MSKKISITVI PETVKELFET GLLEGYPVFY NGGKKGIPLR GTIKDTGILC
201: SCELCKGATV VPPSKFEIHA CNSYRRASEY ICLENGKSLL DVVKECRKGS LKTLEETIQS VIGPVPVKKS LFCRDCKGSF VATLAGNDEQ LCDSCIVSLR
301: SEATPTQSIN TENAVFEPVL NLNSSGTSNM SSVSLRSVKG RKKKKVAIKH SRRQSPSAHT LSRKKWKTPN KVTKPVFAPK SDETSITCSS FRNNMQGNIS
401: EKLSKSVLVT KYSKVASPGV SVHSRTQWKM TKRDQKMHRL VFEEGGLPEG TEVAYYSRGK KLLVGYKKGS GIFCSCCNTE VSPSQFEAHA GWASRKKPYG
501: YIYTSNGVSL HEFAISLLKG RKSSVKDSDD LCIICADGGK LVLCDGCPRA FHKECASLST IPRGKWYCKY CESMLQREKF AERNTNALAA GRISGIDPIE
601: QITNRCIRFV KNAEEAEFIA CVLCRAYDFS KSGFGPRTVI LCDQCEKEYH VGCLKKSKIA DLKELPKGKW FCSVDCKRIY CALQNLLNSG EERLPDSCLD
701: AGRVKEKHNS LVAVGELDVR WRLLSGRISS RETRRLLAEA VSIFHDGFDP IVDSVTGRDF IPSMVYGRNI RGQDFGGMYC AILTVNSTVI SAGILRIFGQ
801: DMAELPLVAT RVGSQGKGYF QLLFSCIEKL LAFLGVRRFV LPAAVEAMSI WTKKFGFEEL TPEQLVSYRK TCWQMISFKG TSMLEKMVPK CRIIKQGEGE
901: TDVPDE
0001: MKEDLVPESN SSVWQSPVKR LAVDGECGEA GDRSRTSCKR IKTTQVNGFI VYTRTRKTKF TKLHEQEDEN AGLSNHLEES KPTSGVTSGF GGDMCRSSSV
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8RWG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.