Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067527 | Potato | nucleus | 79.66 | 52.25 |
| Solyc06g082050.1.1 | Tomato | nucleus | 11.03 | 13.24 |
| Solyc03g005170.2.1 | Tomato | nucleus | 24.75 | 9.15 |
| Solyc03g071550.1.1 | Tomato | nucleus | 20.1 | 8.52 |
| Solyc10g083800.1.1 | Tomato | nucleus | 18.63 | 8.39 |
| Solyc09g008520.2.1 | Tomato | nucleus | 18.63 | 8.17 |
| Solyc09g076010.2.1 | Tomato | nucleus | 26.47 | 7.92 |
| Solyc07g062600.2.1 | Tomato | nucleus | 21.81 | 7.8 |
| Solyc11g066480.1.1 | Tomato | nucleus | 18.63 | 7.14 |
| Solyc09g065340.2.1 | Tomato | nucleus | 22.55 | 6.76 |
| Solyc09g031580.2.1 | Tomato | nucleus | 18.63 | 6.27 |
| Solyc10g084650.1.1 | Tomato | nucleus | 16.18 | 4.89 |
| VIT_05s0020g03450.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 |
| InterPro:IPR019787 | InterPro:Jas | UniProt:K4CNH1 | PFAM:PF16135 | ScanProsite:PS01359 | PFscan:PS50016 |
| PANTHER:PTHR42672 | SMART:SM00249 | SUPFAM:SSF51197 | SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc08g078120.1 | EnsemblPlants:Solyc08g078120.1.1 |
| UniParc:UPI000276C8B8 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr8:-:61954677..61958643
Molecular Weight (calculated)
46349.3 Da
IEP (calculated)
6.247
GRAVY (calculated)
-0.756
Length
408 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRRSRRQR SSSSSWSSES SYNMSDLQYG AELPEKKAKE EFLANPIRGY LTEDDTALEN SSMGRSRKRN RHSRIEQHVK DETFSSDDNE DSSGSSKKRN
101: RRSKRKRAGI SRTRKVNGQK QSRATILTWL LDCGVIQQNA EVVVTEEETT KKMGEIKKEG ILCSCCCNVL TVGDFYKHAG GTTSKPYEYI LIAETCCSLL
201: SSMAKAWYLP EESQFHQFNS IETSHDASDS YDDACMICAD GGNLMCCDNC SSTYHHKICL GMQEVPNGSW YCPFCVCKIC GDPAYENDYL QKCQQCEKKY
301: HRGCRQAREP VSLDMNETPE DTFCDLTCKK MDYGVPSEIV ENFTSSLHEL FDLPMEQKLK GGKTSSFPLG YYASNPDYEK NFPWAEILQL LQSPEIVVQF
401: AKKVYDDQ
101: RRSKRKRAGI SRTRKVNGQK QSRATILTWL LDCGVIQQNA EVVVTEEETT KKMGEIKKEG ILCSCCCNVL TVGDFYKHAG GTTSKPYEYI LIAETCCSLL
201: SSMAKAWYLP EESQFHQFNS IETSHDASDS YDDACMICAD GGNLMCCDNC SSTYHHKICL GMQEVPNGSW YCPFCVCKIC GDPAYENDYL QKCQQCEKKY
301: HRGCRQAREP VSLDMNETPE DTFCDLTCKK MDYGVPSEIV ENFTSSLHEL FDLPMEQKLK GGKTSSFPLG YYASNPDYEK NFPWAEILQL LQSPEIVVQF
401: AKKVYDDQ
0001: MDRGGRRSGE SPGVLIKKRS SSGCLIVKKN DGVGRICSFS ESRPNWESNK RSRMITSDSE SSDRFTIPRN MRQYRNVEES RFGWKRDCVE GKGDDCFVGN
0101: SREWKESKRH RLDDDDDNDD DEESEDELMA MRMRRSFDGS GVDIGKKAYL GSAHFANDRE YGTGSSRKGL DIEKRRKPYL DGSGNIGFGN QGYRNRCKVS
0201: GNEAKTTHAL LLQKKYKRDM NFDEPIRVQG KNGVLKVMVN KQNKIGGLLQ NAKAEQTQCG STIQETGKIR VAIQLPNTLK TEKLPKLPPP ARIQSNGLKL
0301: PMSLTMKSKG QNQDSEDSDS SGRLQKRIIQ PHKPSQMSST GGEKTLPEAS MPSKIRDGKI RRGSGTEKQR LRERIREMLL EAGWTIDYRP RRNRDYLDAV
0401: YISPRGTAYW SIIKAYEALL KQLNSGEKVA KPCDDSSTFS LISDEILSQL TRKTKSKIEK DMKRELHSAS DSDGKATFAR NFLAIKNEVG NDDRYVHKQQ
0501: RNVMSVKNEV NSRDSSQGTT SKSESPLHHQ TEKSTGSSSH RVDGGKSSKH GRSTLLVRRS VRGDNSESDG FVPSSEKRTV LAWLIDSGTL QLSEKVMYMN
0601: QRRTRAMLEG WITRDGIHCG CCSKILAVSK FEIHAGSKLR QPFQNIFLNS GVSLLQCQID AWDKQKGAGN IGFCSVDVIA DDPNDDACGI CGDGGDLVCC
0701: DGCPSTFHQR CLDIRMFPLG DWHCPNCTCK FCKAVIEDVT QTVGANTCKM CEKKYHKSCM PKANVTPADT TEPITSFCGK KCKALSEGVK KYVGVKHELE
0801: AGFSWSLVHR ECTNSDLSLS GHPHIVENNS KLALALTVMD ECFLPIIDRR SGVNIVQNVL YNCGSNFNRL NFGGFYTALL ERGDEIVASA SIRFHGNRLA
0901: EMPFIGTRHV YRHQGMCRRL FSVVESALQH LKVKLLIIPA TADFSHVWIS KFGFRQVEDS LKKEMRSMNL LTFPGIDVLQ KELLAPRHTE SAVDTDCDPC
1001: NEGTNSAIKT NEVSVLETTS PSRDKPVSDY LVEHQPYEDV SSASRDSLVH DGYPKMLETA FKTSTMARSS DMEKHMDCKT SYSRFDGEDE EDSLIESPPQ
1101: RNSDMAFLDH IIRSPVDTGA TENRDVYGSG DDDSPETQ
0101: SREWKESKRH RLDDDDDNDD DEESEDELMA MRMRRSFDGS GVDIGKKAYL GSAHFANDRE YGTGSSRKGL DIEKRRKPYL DGSGNIGFGN QGYRNRCKVS
0201: GNEAKTTHAL LLQKKYKRDM NFDEPIRVQG KNGVLKVMVN KQNKIGGLLQ NAKAEQTQCG STIQETGKIR VAIQLPNTLK TEKLPKLPPP ARIQSNGLKL
0301: PMSLTMKSKG QNQDSEDSDS SGRLQKRIIQ PHKPSQMSST GGEKTLPEAS MPSKIRDGKI RRGSGTEKQR LRERIREMLL EAGWTIDYRP RRNRDYLDAV
0401: YISPRGTAYW SIIKAYEALL KQLNSGEKVA KPCDDSSTFS LISDEILSQL TRKTKSKIEK DMKRELHSAS DSDGKATFAR NFLAIKNEVG NDDRYVHKQQ
0501: RNVMSVKNEV NSRDSSQGTT SKSESPLHHQ TEKSTGSSSH RVDGGKSSKH GRSTLLVRRS VRGDNSESDG FVPSSEKRTV LAWLIDSGTL QLSEKVMYMN
0601: QRRTRAMLEG WITRDGIHCG CCSKILAVSK FEIHAGSKLR QPFQNIFLNS GVSLLQCQID AWDKQKGAGN IGFCSVDVIA DDPNDDACGI CGDGGDLVCC
0701: DGCPSTFHQR CLDIRMFPLG DWHCPNCTCK FCKAVIEDVT QTVGANTCKM CEKKYHKSCM PKANVTPADT TEPITSFCGK KCKALSEGVK KYVGVKHELE
0801: AGFSWSLVHR ECTNSDLSLS GHPHIVENNS KLALALTVMD ECFLPIIDRR SGVNIVQNVL YNCGSNFNRL NFGGFYTALL ERGDEIVASA SIRFHGNRLA
0901: EMPFIGTRHV YRHQGMCRRL FSVVESALQH LKVKLLIIPA TADFSHVWIS KFGFRQVEDS LKKEMRSMNL LTFPGIDVLQ KELLAPRHTE SAVDTDCDPC
1001: NEGTNSAIKT NEVSVLETTS PSRDKPVSDY LVEHQPYEDV SSASRDSLVH DGYPKMLETA FKTSTMARSS DMEKHMDCKT SYSRFDGEDE EDSLIESPPQ
1101: RNSDMAFLDH IIRSPVDTGA TENRDVYGSG DDDSPETQ
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT4G14920]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.