Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- extracellular 1
- golgi 1
- plasma membrane 1
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400043562 | Potato | nucleus | 88.37 | 92.6 |
| Solyc09g031580.2.1 | Tomato | nucleus | 80.69 | 64.06 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 34.16 | 46.53 |
| Zm00001d008232_P001 | Maize | cytosol | 13.08 | 39.38 |
| Solyc06g082050.1.1 | Tomato | nucleus | 12.77 | 36.18 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 41.12 | 33.28 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 6.23 | 33.15 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 22.12 | 33.07 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 22.12 | 32.97 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 22.01 | 32.37 |
| KRH30259 | Soybean | nucleus | 31.78 | 32.31 |
| KRH30263 | Soybean | nucleus | 37.49 | 31.12 |
| Zm00001d022583_P001 | Maize | nucleus | 22.01 | 30.29 |
| KRH17051 | Soybean | nucleus | 32.5 | 29.67 |
| KRH72700 | Soybean | nucleus | 32.09 | 28.12 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.0 | 27.03 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 26.58 | 24.15 |
| Zm00001d028749_P002 | Maize | mitochondrion | 28.14 | 21.29 |
| Solyc08g078120.1.1 | Tomato | nucleus | 8.52 | 20.1 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 28.14 | 19.97 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 28.04 | 19.9 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 27.93 | 19.81 |
| Solyc03g005170.2.1 | Tomato | nucleus | 19.63 | 17.12 |
| Solyc07g062600.2.1 | Tomato | nucleus | 19.42 | 16.39 |
| Solyc10g083800.1.1 | Tomato | nucleus | 14.64 | 15.56 |
| Solyc09g008520.2.1 | Tomato | nucleus | 13.91 | 14.41 |
| Solyc11g066480.1.1 | Tomato | nucleus | 15.26 | 13.82 |
| Solyc09g076010.2.1 | Tomato | nucleus | 19.42 | 13.71 |
| Solyc09g065340.2.1 | Tomato | nucleus | 18.38 | 13.01 |
| Solyc10g084650.1.1 | Tomato | nucleus | 12.88 | 9.19 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom | GO:GO:0003674 |
| GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0016740 | GO:GO:0046872 | InterPro:IPR000182 |
| InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:K4BHI5 | PFAM:PF00628 | PFAM:PF16135 |
| PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc03g071550.1 | EnsemblPlants:Solyc03g071550.1.1 | UniParc:UPI0002767BC8 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | : | : | : | : |
Description
No Description!
Coordinates
chr3:-:18180069..18187027
Molecular Weight (calculated)
108710.0 Da
IEP (calculated)
7.496
GRAVY (calculated)
-0.426
Length
963 amino acids
Sequence
(BLAST)
(BLAST)
001: MVPFIEAICN SVSGEMLCVD PYVSCLQPVE KQLVSGGFVP ISEDVPMSGS VMFNSVLPSQ EQQPAISPNA LSVSHPPKNE ISGTLSITKS DNKIHSSKRK
101: RLEWKTISHE TELCPDAVSE CNDNYMSNHG SLESLQELKE HLSYLGWKIE QAKDYNIIRT RYVAPDGKIF QSLRKVCKML ENSETRAEGQ KTSYDGSSDD
201: LNLSTCLAKS QTCNELSELQ YTSQAPLVPP EYCPEAVIDY CLLGSPDYPA YKKLNSGEKK SMIMKAKKHL AAIGWIFSYC QKGDRRELRY CPPHGRKKFI
301: SLRTACIWCM QQWKAEGQMP ELVSRSNVLE LQGNLAPHRT SCKKLSMATF SALPLRKEPT QLNKVTVCEI SETRKKSNHT GGWNMLKEGK SRSSRTVIDG
401: TESQSSACQL RSSKRARQAT VSSSLHHTPR TVLSWLIDNN MVLPRAKVQY RVKKDGRPMA EGWITRAGIK CKCCQKVYGI SNFEVHAGSS YHRPSANIFL
501: EDGRSLLDCQ LQMKEKSIVR NTRKRSPLLK KRSHLGTNDN VCSVCHYGGE LLLCDECPSS FHIGCLGMKE VPDGEWFCPS CCCEMCGQSR FDKNKDHFTD
601: SSLLICFQCE HKYHARCMRD KGLQKLDCYP VGKWFCNKRC EQICLGIHQL LAKPVIVGID NLTWTLLKYV KPDDFDSDAA KDEFVLETYS KLGVALDVMH
701: ECFEPVEEPY TRRDLMEDVI FNRWSELNRL NFQGFYTVLL ERNDEVITVA TVRIYGEKVA EVPLVATRFQ YRRLGMCHIL MNELETKLME LGVERLVLPA
801: APAVLNTWTT SFGFTMVKES QRLNFLNYTF LDFQGTVMCQ KLLQNIPPEV SSDSTEAYQP QLDHIKSKET VELDGNSALS EVFQAEQLEG SEIVGQGYAD
901: APGGCESNDM DAPTPLITVA NQQAPLGCQD ETSLQYQAEV TDSNVLEKTG VVQYKCYKRR KKI
101: RLEWKTISHE TELCPDAVSE CNDNYMSNHG SLESLQELKE HLSYLGWKIE QAKDYNIIRT RYVAPDGKIF QSLRKVCKML ENSETRAEGQ KTSYDGSSDD
201: LNLSTCLAKS QTCNELSELQ YTSQAPLVPP EYCPEAVIDY CLLGSPDYPA YKKLNSGEKK SMIMKAKKHL AAIGWIFSYC QKGDRRELRY CPPHGRKKFI
301: SLRTACIWCM QQWKAEGQMP ELVSRSNVLE LQGNLAPHRT SCKKLSMATF SALPLRKEPT QLNKVTVCEI SETRKKSNHT GGWNMLKEGK SRSSRTVIDG
401: TESQSSACQL RSSKRARQAT VSSSLHHTPR TVLSWLIDNN MVLPRAKVQY RVKKDGRPMA EGWITRAGIK CKCCQKVYGI SNFEVHAGSS YHRPSANIFL
501: EDGRSLLDCQ LQMKEKSIVR NTRKRSPLLK KRSHLGTNDN VCSVCHYGGE LLLCDECPSS FHIGCLGMKE VPDGEWFCPS CCCEMCGQSR FDKNKDHFTD
601: SSLLICFQCE HKYHARCMRD KGLQKLDCYP VGKWFCNKRC EQICLGIHQL LAKPVIVGID NLTWTLLKYV KPDDFDSDAA KDEFVLETYS KLGVALDVMH
701: ECFEPVEEPY TRRDLMEDVI FNRWSELNRL NFQGFYTVLL ERNDEVITVA TVRIYGEKVA EVPLVATRFQ YRRLGMCHIL MNELETKLME LGVERLVLPA
801: APAVLNTWTT SFGFTMVKES QRLNFLNYTF LDFQGTVMCQ KLLQNIPPEV SSDSTEAYQP QLDHIKSKET VELDGNSALS EVFQAEQLEG SEIVGQGYAD
901: APGGCESNDM DAPTPLITVA NQQAPLGCQD ETSLQYQAEV TDSNVLEKTG VVQYKCYKRR KKI
001: MLGVIEDNLK ITIDQFLHDF DAERYPQLKL LNEASQAVYE TNACLSGMLT IAPQEHQFSC IDKDFKPASQ RCQSLSVLTS VSGIRSEASD INKATEISSK
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.