Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G195300.1 | Wheat | nucleus | 96.02 | 96.09 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 95.95 | 96.02 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 11.41 | 85.64 |
| Zm00001d028749_P002 | Maize | mitochondrion | 55.6 | 59.31 |
| KXG39596 | Sorghum | plasma membrane | 54.64 | 58.98 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 20.91 | 44.1 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 29.23 | 37.45 |
| CDX73252 | Canola | cytosol | 5.15 | 36.27 |
| KRH30259 | Soybean | nucleus | 24.45 | 35.06 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 17.82 | 34.23 |
| KRH30263 | Soybean | nucleus | 27.02 | 31.64 |
| KRH52096 | Soybean | nucleus | 13.92 | 31.29 |
| KRH72700 | Soybean | nucleus | 24.96 | 30.85 |
| AT5G58610.3 | Thale cress | nucleus | 24.67 | 30.59 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 26.73 | 30.5 |
| KRH17051 | Soybean | nucleus | 23.56 | 30.33 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 6.33 | 30.18 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 6.33 | 30.18 |
| CDX84460 | Canola | nucleus | 10.09 | 29.85 |
| PGSC0003DMT400056776 | Potato | nucleus | 26.51 | 29.58 |
| CDY43768 | Canola | nucleus | 10.16 | 29.3 |
| Bra024246.1-P | Field mustard | nucleus | 10.16 | 29.3 |
| Solyc09g031580.2.1 | Tomato | nucleus | 26.14 | 29.27 |
| CDY60050 | Canola | nucleus | 11.86 | 28.85 |
| CDX81205 | Canola | nucleus | 11.56 | 28.7 |
| PGSC0003DMT400043562 | Potato | nucleus | 19.0 | 28.07 |
| Solyc03g071550.1.1 | Tomato | nucleus | 19.81 | 27.93 |
| Bra037758.1-P | Field mustard | nucleus | 11.63 | 27.43 |
| AT5G63900.1 | Thale cress | nucleus | 11.12 | 27.11 |
| CDY52116 | Canola | nucleus | 24.45 | 23.23 |
| Solyc06g082050.1.1 | Tomato | nucleus | 5.52 | 22.06 |
| TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 10.6 | 20.54 |
| CDX80351 | Canola | golgi, plasma membrane | 14.73 | 19.92 |
| TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 12.81 | 18.51 |
| TraesCS7A01G002000.1 | Wheat | nucleus | 11.41 | 15.75 |
| TraesCS3A01G514100.1 | Wheat | plastid | 12.0 | 15.22 |
| TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 11.78 | 13.83 |
| TraesCS5A01G386300.1 | Wheat | nucleus | 13.92 | 13.79 |
| TraesCS2A01G235700.1 | Wheat | nucleus | 14.43 | 13.08 |
| TraesCS4A01G099600.1 | Wheat | cytosol | 9.13 | 12.23 |
| TraesCS2A01G305000.1 | Wheat | cytosol | 13.33 | 12.04 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 13.99 | 11.7 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant |
| InterPro:GNAT_dom | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF00628 |
| PFAM:PF05641 | PFAM:PF16135 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF9 | SMART:SM00249 | SMART:SM00743 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS4A01G109600 |
| EnsemblPlants:TraesCS4A01G109600.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd04301 | TIGR:cd15567 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4A:+:133057338..133065330
Molecular Weight (calculated)
151542.0 Da
IEP (calculated)
6.735
GRAVY (calculated)
-0.442
Length
1358 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPRGAAKRRR EPPPVAAAGE RKLLPGEHVE VISFDPGLCG SWHQAVVIEI LDNFRSVRYN DFVDDNGSGS PLVEKVEVSD AIDGKSSAAQ GSTRGKVRPV
0101: HPHQPLQVSD ASYGLWVDAL VEGSYWEGVI ADHAEGSMER KVFFPDEGDE RIMAVDQLRH TQDWDEVTGT WKPRGIWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT AEDNTWMCGT ESFWEGSLAA LIAELRSVCD KPHQDGNQIG DSCRSAETST SAAFQNKNIE PIVSDKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARAKRESA KHYLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHPNDL LLHSATRNSE DCSSIGTDLI LMENKHHNKL STDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN ETMRMKLKEH LLALGWRIVF KEDDIIRPNG QPSTIKRYRY KSPVGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEGIPDNCNY LAANRVNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKF LRSKAKKFLK SSGWIVCQKM KSSKKRELRY HSPHGNSYKC
0601: LLAACKGYLE DGYQKENNVS SGITTDTSIA LGGGARDTSG RKDLPVSVLD RHDGMFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGAV TKDGIKCRCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLH VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCSIC DLSDYDPDTN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFQHL QELIGKPIPT PVEGLSCTIL RFDRENASDH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQHRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SCSERFELAE SSILSFQGTT
1101: ICQKILDATD HNPRDMSIQL VLNAEEIELG KNSIVSFERT TTCDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELEVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQKVSSNAFS HPEELNGSEY QLECTRIVRE TLESDSQEST SVGVEDRDQP EPELLLEIRS NSSEEGNCAV GVPIITPNPE VNFAVDSHGQ
1301: PYDSVGADQC SESCVSTEVI KPVAAAPGSK YKGKCYERNR WSNGRRKLEM HGYGVSTK
0101: HPHQPLQVSD ASYGLWVDAL VEGSYWEGVI ADHAEGSMER KVFFPDEGDE RIMAVDQLRH TQDWDEVTGT WKPRGIWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT AEDNTWMCGT ESFWEGSLAA LIAELRSVCD KPHQDGNQIG DSCRSAETST SAAFQNKNIE PIVSDKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARAKRESA KHYLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHPNDL LLHSATRNSE DCSSIGTDLI LMENKHHNKL STDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN ETMRMKLKEH LLALGWRIVF KEDDIIRPNG QPSTIKRYRY KSPVGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEGIPDNCNY LAANRVNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKF LRSKAKKFLK SSGWIVCQKM KSSKKRELRY HSPHGNSYKC
0601: LLAACKGYLE DGYQKENNVS SGITTDTSIA LGGGARDTSG RKDLPVSVLD RHDGMFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGAV TKDGIKCRCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLH VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCSIC DLSDYDPDTN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFQHL QELIGKPIPT PVEGLSCTIL RFDRENASDH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQHRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SCSERFELAE SSILSFQGTT
1101: ICQKILDATD HNPRDMSIQL VLNAEEIELG KNSIVSFERT TTCDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELEVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQKVSSNAFS HPEELNGSEY QLECTRIVRE TLESDSQEST SVGVEDRDQP EPELLLEIRS NSSEEGNCAV GVPIITPNPE VNFAVDSHGQ
1301: PYDSVGADQC SESCVSTEVI KPVAAAPGSK YKGKCYERNR WSNGRRKLEM HGYGVSTK
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.