CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra024246.1-P	Field mustard	nucleus	100.0	100.0
CDX84460	Canola	nucleus	91.72	94.12
CDX73252	Canola	cytosol	21.87	53.37
CDX81205	Canola	nucleus	57.32	49.36
CDY60050	Canola	nucleus	58.17	49.1
AT5G63900.1	Thale cress	nucleus	53.08	44.88
CDY26900	Canola	cytosol, mitochondrion, nucleus	26.75	44.21
Zm00001d008232_P001	Maize	cytosol	20.38	30.0
HORVU4Hr1G056300.1	Barley	extracellular	9.98	25.97
KRH52096	Soybean	nucleus	32.48	25.33
KXG31496	Sorghum	cytosol, extracellular	5.1	22.86
CDY68599	Canola	cytosol	11.89	20.22
Zm00001d022583_P001	Maize	nucleus	26.96	18.14
TraesCS2A01G085100.1	Wheat	nucleus	23.14	16.93
TraesCS2B01G099800.1	Wheat	nucleus	23.35	16.79
TraesCS2D01G083000.1	Wheat	nucleus	22.93	16.72
CDX71404	Canola	extracellular, golgi, vacuole	18.05	16.57
CDY18439	Canola	nucleus	20.38	14.91
GSMUA_AchrUn_...	Banana	nucleus	30.36	14.86
CDX93373	Canola	nucleus	20.17	14.5
CDY10104	Canola	nucleus	24.42	11.71
GSMUA_Achr6P32880_001	Banana	nucleus	25.9	11.51
Zm00001d028749_P002	Maize	mitochondrion	30.57	11.31
CDX80351	Canola	golgi, plasma membrane	23.99	11.26
CDX74615	Canola	nucleus	23.35	11.02
CDY47291	Canola	nucleus	25.05	10.98
CDY37657	Canola	nucleus	23.78	10.52
CDX77146	Canola	nucleus	20.38	10.41
TraesCS4B01G194600.1	Wheat	nucleus	29.3	10.17
TraesCS4D01G195300.1	Wheat	nucleus	29.3	10.17
TraesCS4A01G109600.1	Wheat	nucleus	29.3	10.16
CDX98519	Canola	nucleus	23.57	9.94
CDY04521	Canola	nucleus	20.17	9.93
CDX97621	Canola	nucleus	22.93	9.69
CDY52116	Canola	nucleus	28.87	9.52
CDY63985	Canola	nucleus	20.17	9.28
CDY30516	Canola	nucleus	20.59	9.25
CDY70414	Canola	cytosol, nucleus	6.79	5.03

Protein Annotations

EnsemblPlants:CDY43768	EnsemblPlantsGene:GSBRNA2T00077267001	Gene3D:3.30.40.10	GO:A0A078I3R7	GO:GO:0003674	GO:GO:0005488
GO:GO:0046872	InterPro:IPR013083	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_RING/FYVE/PHD	PANTHER:PTHR42672
PANTHER:PTHR42672:SF9	ProteinID:CDY43768	ProteinID:CDY43768.1	SEG:seg	SMART:SM00249	SUPFAM:SSF57903
UniParc:UPI000253F32F	UniProt:A0A078I3R7	MapMan:15.5.30	:	:	:

Description

BnaA06g23040DBnaA06g23040D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I3R7]

Coordinates

chrLK032568:+:51123..52538

Molecular Weight (calculated)

52920.9 Da

IEP (calculated)

6.885

GRAVY (calculated)

-0.534

Length

471 amino acids

Sequence
(BLAST)

001: MEDSFLFITV EAEMNPESLR KWLSIAKEGK TTTKGARHFS TKAKKHLSAL GWRFAYVRKG VSRELRYKSP EGKWFNSLVT ACGACLEDED DDDDSSTQEQ
101: DDDNQEAPAS GGVPKKKRTK VCDTAPDKNR SSHLAKKILN EQEKTSDESS KLTPKPKPRF GKSKRTNCDV CCVCHLGGED LLRCNGCPSA IHPACSGLRS
201: IAPDEHVQDW FFCTCCCCDI CNQRRTPGII SMLLTCEQCH RRCHRNCLEP PEPLIDLPWF CSSQCSSVFS ALQKLQGTKI ALVGDEGLVW SLIRVPNDGE
301: QQQLDSAVKM LQRSFKPTPD RFSGRDLVEE LIFSKDSDGV GRKFYTFSVE RNNNPIIVVA MRVGKDVAEI PLLATLTRDS YDRISSMCRA LMDELEKQMS
401: EIGVRRLVLP ALADDVHTWT QQFGFSHMES SERLELLKHG LFDFVGTVMC HKFLKEREEQ GESSPTGGNQ S

Best Arabidopsis Sequence Match ( AT5G63900.1 )
(BLAST)

001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.