Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX97621 | Canola | nucleus | 93.38 | 93.63 |
| AT3G14980.2 | Thale cress | nucleus | 76.9 | 72.25 |
| PGSC0003DMT400032367 | Potato | nucleus | 19.43 | 44.74 |
| Os04t0691700-01 | Rice | nucleus | 15.31 | 43.4 |
| Zm00001d012354_P001 | Maize | cytosol | 11.37 | 40.32 |
| Solyc07g062600.2.1 | Tomato | nucleus | 35.99 | 35.23 |
| KRH27324 | Soybean | nucleus | 39.66 | 33.79 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 42.52 | 33.55 |
| KRH21991 | Soybean | nucleus | 38.67 | 32.88 |
| CDX73252 | Canola | cytosol | 5.37 | 31.09 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 25.78 | 30.41 |
| GSMUA_AchrUn_... | Banana | nucleus | 23.9 | 26.51 |
| KXG24184 | Sorghum | nucleus | 23.55 | 25.76 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 6.36 | 24.91 |
| CDX84460 | Canola | nucleus | 10.21 | 24.84 |
| CDX81205 | Canola | nucleus | 11.73 | 23.95 |
| CDY43768 | Canola | nucleus | 9.94 | 23.57 |
| CDY68599 | Canola | cytosol | 5.82 | 23.47 |
| CDY60050 | Canola | nucleus | 11.64 | 23.3 |
| CDX71404 | Canola | extracellular, golgi, vacuole | 10.56 | 23.0 |
| CDY10104 | Canola | nucleus | 19.87 | 22.61 |
| OQU82646 | Sorghum | nucleus | 26.68 | 21.86 |
| Zm00001d026698_P011 | Maize | nucleus | 26.05 | 21.73 |
| CDY18439 | Canola | nucleus | 12.35 | 21.43 |
| CDY47291 | Canola | nucleus | 20.5 | 21.3 |
| Os04t0433900-00 | Rice | nucleus | 26.23 | 21.19 |
| CDX74615 | Canola | nucleus | 18.8 | 21.04 |
| EES12185 | Sorghum | nucleus | 25.87 | 20.97 |
| CDX93373 | Canola | nucleus | 12.18 | 20.76 |
| CDY37657 | Canola | nucleus | 19.52 | 20.47 |
| Zm00001d003648_P002 | Maize | nucleus | 24.71 | 20.28 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 24.8 | 18.41 |
| TraesCS2A01G305000.1 | Wheat | cytosol | 24.71 | 18.36 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 24.8 | 18.33 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 26.77 | 18.25 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 26.41 | 18.16 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 26.77 | 17.93 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 25.16 | 17.67 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 24.71 | 17.17 |
| CDX77146 | Canola | nucleus | 13.61 | 16.49 |
| CDY04521 | Canola | nucleus | 12.62 | 14.73 |
| CDY30516 | Canola | nucleus | 13.7 | 14.59 |
| CDX80351 | Canola | golgi, plasma membrane | 12.18 | 13.55 |
| CDY63985 | Canola | nucleus | 11.55 | 12.6 |
| CDY52116 | Canola | nucleus | 14.59 | 11.41 |
| CDY70414 | Canola | cytosol, nucleus | 5.28 | 9.28 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | GO:A0A078ECP2 | InterPro:Acyl_CoA_acyltransferase |
| EnsemblPlants:CDX98519 | ProteinID:CDX98519 | ProteinID:CDX98519.1 | InterPro:GNAT_dom | EnsemblPlantsGene:GSBRNA2T00106163001 | InterPro:IDM1 |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF00628 | PFAM:PF16135 |
| PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | UniParc:UPI0004EE1D1E | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
BnaC05g38560D
Coordinates
chrLK031905:-:723390..728164
Molecular Weight (calculated)
123614.0 Da
IEP (calculated)
5.977
GRAVY (calculated)
-0.498
Length
1117 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLPEAEVEML EDDCFEGSYE EHQIFREVFF ASDSGNTTTA TKRCLVTGAI NFECDDSSKN ANSSLSSNND NSVVTSGYAC LEPSSASKDG SEVNTKAKRA
0101: KLSANKNVDE KGSPFTGFQN ADFARDMIPL HLVESSNKGV STSSYLLKQS IEKGKDVYLS GIVSQNVAKC DGKELKAIES PVSQESFATR VFSAGASTPL
0201: QLKERTKVSP NELSISETCL KIDPKEDPRP LLYKYVCKLL ASSRWKIEKR QRSNSKYSET IYVSSQGRKF REFGSAWRSL GEILLADHKL MDTGTKKWTG
0301: INDFWSDLSL TLLDIEENMK LLNLANTRAL WWSTLEPFVT AVFVDKKVGS LRKGNKVEVA RNSVIDKFKK EDATCLKLIS GCPESVLTVS EGSLLVYDDE
0401: NANQEIHSDL ERKNASSRQE KQNSVSKVVE ASKLIAEGIH ESLLRKKSHG RSKKAPLDPT GLECEVKDMG NIHVISEENG DKRFRNDKMK SSKKGRRKNC
0501: NQDDVVFKTK GKVGCAIRSS QKKKKAQKSK ARTKKKNNRG GCRLLPRSTS NGEKQFGQGN CSALGPRTVL SWLLASKVIS KDEVIQLRDP DDDDTVVKTG
0601: IVTKDGVVCT CCNRTISLSE FKKHAGFDQG CPCLNLFMGS GKPFASCQLE AWYAEYKARR NGSRSEEGYD GDDPNDDSCG ICGDGGELIC CDNCPSTFHQ
0701: ACLAMKVLPE GSWYCSSCTC WICREFVSDN APDDRSQDFK CTQCAHKYHG VCLQEISKRR EPFPETYFCG KSCEKVHSGL SSRVGVTYPN ADGLSWTVLK
0801: CFQEDGKAHS ARRLALKAEC NSKLAVALSI MEECFLSMVD ARTGIDMIPH VLYNWGSKFA RLDFDGFYTV VVEKNDVMIS VASIRVHGVS VAEMPLVATC
0901: SKYRRQGMCR ILVTAIEEML MSLKVENLVV AALPSLVETW TEGFGFKTMD DEEREALKRL NLMVFPGTVL LKKTLYQCAK PNTVNGNVNK EADVDKAGFA
1001: VTTTQLESCD HMVPEGSDDE PLLGLPVPLG TNQTEPTSEA EKPAQESNTK EDCLEKELSK FSSEGEEEVT RRASSSSEAV EEERQVGSVE VVNNVISDEM
1101: LLCVDEQLDF DSSEDSD
0101: KLSANKNVDE KGSPFTGFQN ADFARDMIPL HLVESSNKGV STSSYLLKQS IEKGKDVYLS GIVSQNVAKC DGKELKAIES PVSQESFATR VFSAGASTPL
0201: QLKERTKVSP NELSISETCL KIDPKEDPRP LLYKYVCKLL ASSRWKIEKR QRSNSKYSET IYVSSQGRKF REFGSAWRSL GEILLADHKL MDTGTKKWTG
0301: INDFWSDLSL TLLDIEENMK LLNLANTRAL WWSTLEPFVT AVFVDKKVGS LRKGNKVEVA RNSVIDKFKK EDATCLKLIS GCPESVLTVS EGSLLVYDDE
0401: NANQEIHSDL ERKNASSRQE KQNSVSKVVE ASKLIAEGIH ESLLRKKSHG RSKKAPLDPT GLECEVKDMG NIHVISEENG DKRFRNDKMK SSKKGRRKNC
0501: NQDDVVFKTK GKVGCAIRSS QKKKKAQKSK ARTKKKNNRG GCRLLPRSTS NGEKQFGQGN CSALGPRTVL SWLLASKVIS KDEVIQLRDP DDDDTVVKTG
0601: IVTKDGVVCT CCNRTISLSE FKKHAGFDQG CPCLNLFMGS GKPFASCQLE AWYAEYKARR NGSRSEEGYD GDDPNDDSCG ICGDGGELIC CDNCPSTFHQ
0701: ACLAMKVLPE GSWYCSSCTC WICREFVSDN APDDRSQDFK CTQCAHKYHG VCLQEISKRR EPFPETYFCG KSCEKVHSGL SSRVGVTYPN ADGLSWTVLK
0801: CFQEDGKAHS ARRLALKAEC NSKLAVALSI MEECFLSMVD ARTGIDMIPH VLYNWGSKFA RLDFDGFYTV VVEKNDVMIS VASIRVHGVS VAEMPLVATC
0901: SKYRRQGMCR ILVTAIEEML MSLKVENLVV AALPSLVETW TEGFGFKTMD DEEREALKRL NLMVFPGTVL LKKTLYQCAK PNTVNGNVNK EADVDKAGFA
1001: VTTTQLESCD HMVPEGSDDE PLLGLPVPLG TNQTEPTSEA EKPAQESNTK EDCLEKELSK FSSEGEEEVT RRASSSSEAV EEERQVGSVE VVNNVISDEM
1101: LLCVDEQLDF DSSEDSD
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.