CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18439	Canola	nucleus	95.11	96.74
Bra017181.1-P	Field mustard	nucleus	95.11	77.68
AT2G37520.1	Thale cress	nucleus	84.58	66.83
PGSC0003DMT400028730	Potato	nucleus	48.4	61.67
AT3G53680.2	Thale cress	nucleus	77.25	60.02
KRH19715	Soybean	nucleus	62.29	45.89
KRH32312	Soybean	nucleus	62.29	45.79
VIT_08s0040g03340.t01	Wine grape	nucleus	60.15	44.93
CDY68599	Canola	cytosol	18.93	44.77
CDX71404	Canola	extracellular, golgi, vacuole	30.08	38.4
Solyc10g084650.1.1	Tomato	nucleus	58.78	28.54
GSMUA_Achr6P33300_001	Banana	plastid	28.24	27.99
CDX77146	Canola	nucleus	37.25	26.46
Zm00001d027880_P002	Maize	nucleus	19.08	25.67
CDX73252	Canola	cytosol	7.48	25.39
CDY63985	Canola	nucleus	39.08	25.0
CDY04521	Canola	nucleus	35.88	24.56
CDY30516	Canola	nucleus	37.25	23.26
CDY26900	Canola	cytosol, mitochondrion, nucleus	9.77	22.46
CDX84460	Canola	nucleus	14.96	21.35
Zm00001d028660_P013	Maize	endoplasmic reticulum	26.56	20.33
CDY43768	Canola	nucleus	14.5	20.17
OQU93136	Sorghum	cytosol	21.68	20.14
CDX81205	Canola	nucleus	16.34	19.56
HORVU4Hr1G059010.32	Barley	plastid	28.4	19.18
CDY60050	Canola	nucleus	16.03	18.82
TraesCS4B01G204700.1	Wheat	cytosol	28.86	18.64
TraesCS4A01G099600.1	Wheat	cytosol	28.86	18.64
TraesCS4D01G205600.2	Wheat	cytosol	28.86	18.51
OQU92810	Sorghum	cytosol	26.41	18.4
Os03t0278700-01	Rice	cytosol, nucleus	25.5	17.56
CDY70414	Canola	cytosol, nucleus	16.49	16.98
CDY10104	Canola	nucleus	19.54	13.03
CDX74615	Canola	nucleus	19.24	12.63
CDY47291	Canola	nucleus	20.0	12.19
CDX98519	Canola	nucleus	20.76	12.18
CDY37657	Canola	nucleus	19.54	12.02
CDX97621	Canola	nucleus	20.31	11.94
CDX80351	Canola	golgi, plasma membrane	13.89	9.06
CDY52116	Canola	nucleus	16.18	7.42

Protein Annotations

MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	GO:A0A078E1B2	InterPro:Acyl_CoA_acyltransferase	EnsemblPlants:CDX93373
ProteinID:CDX93373	ProteinID:CDX93373.1	EnsemblPlantsGene:GSBRNA2T00155358001	InterPro:IPR013083	InterPro:IPR019787	InterPro:Jas
PFAM:PF00628	PFAM:PF16135	ScanProsite:PS01359	PFscan:PS50016	PANTHER:PTHR42672	PANTHER:PTHR42672:SF4
SMART:SM00249	SUPFAM:SSF55729	SUPFAM:SSF57903	UniParc:UPI0004EE1DA3	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD
InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:

Description

BnaC04g45230D

Coordinates

chrLK031875:+:1359811..1364027

Molecular Weight (calculated)

72275.4 Da

IEP (calculated)

7.581

GRAVY (calculated)

-0.256

Length

655 amino acids

Sequence
(BLAST)

001: MLDGAPVKYI SLPRVRELQG VIHSGGYLCG CTNCNFSKQR VLSAYEFELH AGAKTKHPNN HIFLENGRAV YSIVQELKTA PHCVFEDVIR NVAGSALCEE
101: GLQAWKGDGQ QVSNRVFLTG TVSSNIPLSA IRVENCSYNG QSHDESQSLT PYSLENHYYR EKTYETDALY EPKRIAKKKI TSHVSGTGCH KKVTEGSNRK
201: RDNDLHRLVF MPNGLPDGTE LAYYVKTQKL LAGYKQGNGI VCSCCNREIS PSQFEAHAGM AGRRQPYRHI FISSGLSLHD IALSLANGQI ITTGDSDDMC
301: SICGDGGDLL LCAGCPQAFH TACLKFQSMP EGTWYCSSCS DGSVSSKKAT ANGPSGNSKP ILIRLSRVVK APESEIGGCV FCRSHDFSIG RFDERTVILC
401: DQCEKEYHVG CLRENGLCDL KEIPQEKWFC CNGCSRIHTA VQSSVSCGPQ TIPGPLSDMI RRKDREKGII TEDGDTVEWR ILSGKSRYPE HLPLLSRAAV
501: IFRECFDPIV AKSGRDLIPV MVYGRNISGQ EFGGMYCLVL IVNSLVVSAA LLRIFGQQVA ELPMVATSRE YQGRGYFQGL FACVENLLSS LNVENLVLPA
601: AEEAESIWTN KFGFTKMTEQ QLQSYQKEVQ LTVFKGTSML EKKVPKSLSE STTLI

Best Arabidopsis Sequence Match ( AT2G37520.1 )
(BLAST)

001: MGEGTICLEM PKEENGQLKR DRLDDDTDEG NKGDHFPSKK QAKEASNDDI TSEISNPVAS PVESTSLFRD VSSQPVKSGL VECSGSDFGS EETVSDDASV
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IQY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.