Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY18439 | Canola | nucleus | 61.67 | 49.22 |
| CDX93373 | Canola | nucleus | 61.67 | 48.4 |
| Bra017181.1-P | Field mustard | nucleus | 61.67 | 39.53 |
| VIT_08s0040g03340.t01 | Wine grape | nucleus | 65.56 | 38.43 |
| KRH32312 | Soybean | nucleus | 66.34 | 38.27 |
| KRH19715 | Soybean | nucleus | 66.15 | 38.25 |
| AT2G37520.1 | Thale cress | nucleus | 61.67 | 38.24 |
| Solyc10g084650.1.1 | Tomato | nucleus | 95.72 | 36.47 |
| AT3G53680.2 | Thale cress | nucleus | 59.73 | 36.42 |
| GSMUA_Achr6P33300_001 | Banana | plastid | 32.88 | 25.57 |
| Zm00001d027880_P002 | Maize | nucleus | 23.35 | 24.64 |
| PGSC0003DMT400009969 | Potato | nucleus | 45.14 | 24.63 |
| PGSC0003DMT400072425 | Potato | nucleus | 33.85 | 22.69 |
| PGSC0003DMT400001219 | Potato | nucleus | 44.16 | 21.44 |
| OQU93136 | Sorghum | cytosol | 28.4 | 20.71 |
| PGSC0003DMT400032367 | Potato | nucleus | 19.46 | 20.62 |
| PGSC0003DMT400067527 | Potato | nucleus | 20.82 | 17.2 |
| Zm00001d028660_P013 | Maize | endoplasmic reticulum | 25.88 | 15.54 |
| HORVU4Hr1G059010.32 | Barley | plastid | 27.43 | 14.54 |
| OQU92810 | Sorghum | cytosol | 26.46 | 14.47 |
| TraesCS4A01G099600.1 | Wheat | cytosol | 28.02 | 14.2 |
| Os03t0278700-01 | Rice | cytosol, nucleus | 26.26 | 14.2 |
| TraesCS4B01G204700.1 | Wheat | cytosol | 27.82 | 14.1 |
| TraesCS4D01G205600.2 | Wheat | cytosol | 27.82 | 14.01 |
| PGSC0003DMT400043562 | Potato | nucleus | 21.6 | 12.08 |
| PGSC0003DMT400056776 | Potato | nucleus | 21.79 | 9.2 |
| PGSC0003DMT400091155 | Potato | nucleus | 2.92 | 7.54 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:M1ARL5 | PFAM:PF16135 |
| EnsemblPlantsGene:PGSC0003DMG400011059 | PGSC:PGSC0003DMG400011059 | EnsemblPlants:PGSC0003DMT400028730 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF4 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI0002956762 | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
PHD finger family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011059]
Coordinates
chr10:+:54484164..54492530
Molecular Weight (calculated)
56809.2 Da
IEP (calculated)
7.379
GRAVY (calculated)
-0.214
Length
514 amino acids
Sequence
(BLAST)
(BLAST)
001: MVNFSDCSSV MEDGLYPASY SYIDNFPPNS CSSMETAESW KHVVKKPRYN FSSSTAEPKK PAEGGTKKRD NDLHRSLFMP NGLPDGTDLS YYSKGKKVLG
101: GYKQGNGIVC SCCDTEISPS QFEAHAGCAA KRQPYRHIYT SNGLTLHDIA LMLANGQSIA TNNSDDMCTI CGDAGDLICC EGCPRAFHAA CIGLQCTPTS
201: GWLCSYCRDK FVPGRKTAGD AGPIMIRLTR VVKAPESESG GCVVCRTPDF SVAKFDDRTV MLCDQCEKEY HVGCLRESGR CDLKELPKDK WFCCNDCNKI
301: YVVLQNCVLK GAEVIPAPAA AAVTKKQVQK CLMDTATDDI QWRILSGKSR FPEHLPLLSS AAVIFRECFD PIVAKSGRDL IPVMVYGRNI SGQEFGGMYC
401: IVLIVKSVVV SAALLRIFGQ EVAELPMVAT SRENQRKGYF RALFGSIEIL LSSMHVKNLV LPAAEEAKSI WTNKLGFRKM TDERYLEYSR DFTLTEFNGT
501: SMLEKEVQQT SYEL
101: GYKQGNGIVC SCCDTEISPS QFEAHAGCAA KRQPYRHIYT SNGLTLHDIA LMLANGQSIA TNNSDDMCTI CGDAGDLICC EGCPRAFHAA CIGLQCTPTS
201: GWLCSYCRDK FVPGRKTAGD AGPIMIRLTR VVKAPESESG GCVVCRTPDF SVAKFDDRTV MLCDQCEKEY HVGCLRESGR CDLKELPKDK WFCCNDCNKI
301: YVVLQNCVLK GAEVIPAPAA AAVTKKQVQK CLMDTATDDI QWRILSGKSR FPEHLPLLSS AAVIFRECFD PIVAKSGRDL IPVMVYGRNI SGQEFGGMYC
401: IVLIVKSVVV SAALLRIFGQ EVAELPMVAT SRENQRKGYF RALFGSIEIL LSSMHVKNLV LPAAEEAKSI WTNKLGFRKM TDERYLEYSR DFTLTEFNGT
501: SMLEKEVQQT SYEL
001: MGEGTICLEM PKEENGQLKR DRLDDDTDEG NKGDHFPSKK QAKEASNDDI TSEISNPVAS PVESTSLFRD VSSQPVKSGL VECSGSDFGS EETVSDDASV
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IQY0]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.