Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400067527 | Potato | nucleus | 83.92 | 26.85 |
| PGSC0003DMT400072425 | Potato | nucleus | 16.58 | 4.3 |
| PGSC0003DMT400043562 | Potato | nucleus | 16.58 | 3.59 |
| PGSC0003DMT400009969 | Potato | nucleus | 16.58 | 3.5 |
| VIT_06s0061g00830.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 13.07 | 3.42 |
| PGSC0003DMT400028730 | Potato | nucleus | 7.54 | 2.92 |
| PGSC0003DMT400056776 | Potato | nucleus | 15.08 | 2.47 |
| PGSC0003DMT400001219 | Potato | nucleus | 12.06 | 2.27 |
| PGSC0003DMT400032367 | Potato | nucleus | 2.51 | 1.03 |
| VIT_06s0061g00820.t01 | Wine grape | cytosol | 0.5 | 0.67 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400091155 | EnsemblPlantsGene:PGSC0003DMG400040726 | InterPro:Jas | PANTHER:PTHR42672 | PFAM:PF16135 | PGSC:PGSC0003DMG400040726 |
| SEG:seg | UniParc:UPI000296825E | UniProt:M1DLZ9 | MapMan:35.2 | : | : |
Description
Acetyltransferase, GNAT family protein [Source:PGSC_GENE;Acc:PGSC0003DMG400040726]
Coordinates
chr11:+:29794147..29794746
Molecular Weight (calculated)
22655.0 Da
IEP (calculated)
10.069
GRAVY (calculated)
-0.846
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDLQYGAKL PEKKSKEEFL AHPIRGYLTE DDTTLDNSSM GRSRKRNRHS KKEQHAKDEP FSLEDNQDSF VSSKKRNTRG RRKRVGKSRK RKVNGQKQSR
101: ATILSWLINC DVIKENVEVV VIEEETRKKL GKIKKEGILC SCCCTIFTVG DFYKYTGGTT SKHYEYILIA ETCSSLLSSM VKAYFTNVGS DAPTSHTRS
101: ATILSWLINC DVIKENVEVV VIEEETRKKL GKIKKEGILC SCCCTIFTVG DFYKYTGGTT SKHYEYILIA ETCSSLLSSM VKAYFTNVGS DAPTSHTRS
001: MLGVIEDNLK ITIDQFLHDF DAERYPQLKL LNEASQAVYE TNACLSGMLT IAPQEHQFSC IDKDFKPASQ RCQSLSVLTS VSGIRSEASD INKATEISSK
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.