Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 3
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400091155 | Potato | nucleus | 26.85 | 83.92 |
| Solyc08g078120.1.1 | Tomato | nucleus | 52.25 | 79.66 |
| PGSC0003DMT400032367 | Potato | nucleus | 20.1 | 25.77 |
| PGSC0003DMT400028730 | Potato | nucleus | 17.2 | 20.82 |
| PGSC0003DMT400043562 | Potato | nucleus | 24.12 | 16.32 |
| PGSC0003DMT400009969 | Potato | nucleus | 20.74 | 13.69 |
| PGSC0003DMT400072425 | Potato | nucleus | 14.95 | 12.13 |
| PGSC0003DMT400056776 | Potato | nucleus | 22.83 | 11.67 |
| PGSC0003DMT400001219 | Potato | nucleus | 19.61 | 11.52 |
| VIT_05s0020g03450.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:2.60.120.330 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0016740 | GO:GO:0046872 | GO:GO:0055114 | InterPro:IPNS-like | InterPro:IPR000182 |
| InterPro:IPR005123 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:IPR027443 | InterPro:Jas | UniProt:M1CHG0 |
| InterPro:Oxoglu/Fe-dep_dioxygenase | PFAM:PF03171 | PFAM:PF16135 | EnsemblPlantsGene:PGSC0003DMG400026258 | PGSC:PGSC0003DMG400026258 | EnsemblPlants:PGSC0003DMT400067527 |
| ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF10 | SMART:SM00249 |
| SUPFAM:SSF51197 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI000296CE73 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400026258]
Coordinates
chr8:-:51235299..51240722
Molecular Weight (calculated)
71493.2 Da
IEP (calculated)
8.309
GRAVY (calculated)
-0.586
Length
622 amino acids
Sequence
(BLAST)
(BLAST)
001: MAGRSRKQRS SSSSWSSESS YNMSDLQYRA KLPEKKAKEE FLANPIRGYL TEDDTTHDNS SMGRSRKRNR HSKKEQHVKD ETFSSEDNQD SSVSSKKRNT
101: RGRRKRAGIS RKRKVNGQKQ SRATILTWLI DCGVIQENAE VVVIEEETTK KMGKIKKEGI LCSCCCTVLT VGDFYKHAGG TTSKPYEYIL IAETCSSLLS
201: FMVKAWYLPE ESKFHRFNLI ETSHDASDSY DDACMICADG GNLMCCDNCS STYHHNKCLG MQEVPNGSWY CPFCVCKICG DPAYENDYLQ KCQQCERKYH
301: RECRQAREPV SLDMNETQED TFCDLTCKKI YDKLERCYLG VEHELDKSYK WTLLQNTDDG SGINIEDDYQ RTVCHSKLVV ARRLMEDCFE EIIDRHTKID
401: VVKSLVYNCG SNFNRVNFRG FYTFILENDE EIISAATIRI HGTNLAEMPF IATNKEYRRK GMCKKLMVAI ETTLCSLKVE KLVIPSVSEC IETWIESYGF
501: RLISSPLPKE ITLHNTLMFH DSVRLQKDIR PSASDKQVWT NGRLKSVIHR AVVNKEKQRL SIAYFMNPTS SATIECPQQL IDSVSNPRKY VPFTWGELRY
601: LLLTTRRVRG KAVAINNFLI SS
101: RGRRKRAGIS RKRKVNGQKQ SRATILTWLI DCGVIQENAE VVVIEEETTK KMGKIKKEGI LCSCCCTVLT VGDFYKHAGG TTSKPYEYIL IAETCSSLLS
201: FMVKAWYLPE ESKFHRFNLI ETSHDASDSY DDACMICADG GNLMCCDNCS STYHHNKCLG MQEVPNGSWY CPFCVCKICG DPAYENDYLQ KCQQCERKYH
301: RECRQAREPV SLDMNETQED TFCDLTCKKI YDKLERCYLG VEHELDKSYK WTLLQNTDDG SGINIEDDYQ RTVCHSKLVV ARRLMEDCFE EIIDRHTKID
401: VVKSLVYNCG SNFNRVNFRG FYTFILENDE EIISAATIRI HGTNLAEMPF IATNKEYRRK GMCKKLMVAI ETTLCSLKVE KLVIPSVSEC IETWIESYGF
501: RLISSPLPKE ITLHNTLMFH DSVRLQKDIR PSASDKQVWT NGRLKSVIHR AVVNKEKQRL SIAYFMNPTS SATIECPQQL IDSVSNPRKY VPFTWGELRY
601: LLLTTRRVRG KAVAINNFLI SS
0001: MEGGGGSGER SRIASNTPRS LKEKSDGVGR TVSSTETRQN YQKRSRMVVS DSESSDEFMK PPPRRSGVDR KTLGAKEKFV RKRDRVEHDR NGYVRRNNEA
0101: SGSFMKMNKL DIFEFDEYDG FDSANLMRKR FDNGSVGVRG RSSFASRRVD SSVGRSGSGR EGLFDRRRNT FVNGTCSASS QEDSSSESDS DEPMRVQGIN
0201: GVLKVKVNNK TNTLAASINP RDAEIYERPP SSRKAQRREN VVVKPPFRKS NNVDNNSESE ESDMSRKSKR KKSEYSKPKK EFNTKSKSTF PELVNPDVRE
0301: ERRGRRGGGT DKQRLRERIK GMLTDAGWTI DYKPRRNQSY LDAVYVNPSG TAYWSIIKAY DALLKQLKDE GVDARPRKDT AAVASVSEEI VNKLARKAKK
0401: TRSEMTKKWK QNSSGSDSEN KSEGGAYTDT SEERIRSSIK LGGKSTKKGR NGADWDELHK KSKRSLYYNN ARPSCGSDSH YLHGRKTKKI GRCTLLVRSS
0501: KDKKNPAING FNPYSGKRTL LSWLIESGVV QLRQKVQYMR RRGAKVMLEG WITREGIHCD CCSKILTVSR FEIHAGSKSC QPFQNIYLES GASLLQCQVR
0601: AWNMQKDATN LALHQVDTDG DDPNDDACGI CGDGGDLICC DGCPSTYHQN CLGMQVLPSG DWHCPNCTCK FCDAAVASGG KDGNFISLLS CGMCERRYHQ
0701: LCLNDEAHKV QSFGSASSFC GPKCLELFEK LQKYLGVKTE IEGGYSWSLI HRVDTDSDTN SQMSAQRIEN NSKLAVGLAI MDECFLPIVD RRSGVDLIRN
0801: VLYNCGSNFN RINYTGFYTA ILERGDEIIS AASLRFHGMQ LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFTPLD
0901: DSVRKEMRSL NTLVFPGIDM LQKPLLHEEN IIAPAAAGDA MISEVETEKK SEFTSSVEIG PYAVEGDEFV ADAANCYKDI LASDEDNILV SVETAMGTIC
1001: KPKDELSRHF RGEESGISSS PCQITLKSGT KHVLGHICDD TGSSCEDGLT DVNVEADASL LSQEIQQASA SFKVENNLSL SISGRGSSDL SSISQEVKSE
1101: QTSSNLDGVP SCKDYNILVP GAKLDKSKDD AFADGFLL
0101: SGSFMKMNKL DIFEFDEYDG FDSANLMRKR FDNGSVGVRG RSSFASRRVD SSVGRSGSGR EGLFDRRRNT FVNGTCSASS QEDSSSESDS DEPMRVQGIN
0201: GVLKVKVNNK TNTLAASINP RDAEIYERPP SSRKAQRREN VVVKPPFRKS NNVDNNSESE ESDMSRKSKR KKSEYSKPKK EFNTKSKSTF PELVNPDVRE
0301: ERRGRRGGGT DKQRLRERIK GMLTDAGWTI DYKPRRNQSY LDAVYVNPSG TAYWSIIKAY DALLKQLKDE GVDARPRKDT AAVASVSEEI VNKLARKAKK
0401: TRSEMTKKWK QNSSGSDSEN KSEGGAYTDT SEERIRSSIK LGGKSTKKGR NGADWDELHK KSKRSLYYNN ARPSCGSDSH YLHGRKTKKI GRCTLLVRSS
0501: KDKKNPAING FNPYSGKRTL LSWLIESGVV QLRQKVQYMR RRGAKVMLEG WITREGIHCD CCSKILTVSR FEIHAGSKSC QPFQNIYLES GASLLQCQVR
0601: AWNMQKDATN LALHQVDTDG DDPNDDACGI CGDGGDLICC DGCPSTYHQN CLGMQVLPSG DWHCPNCTCK FCDAAVASGG KDGNFISLLS CGMCERRYHQ
0701: LCLNDEAHKV QSFGSASSFC GPKCLELFEK LQKYLGVKTE IEGGYSWSLI HRVDTDSDTN SQMSAQRIEN NSKLAVGLAI MDECFLPIVD RRSGVDLIRN
0801: VLYNCGSNFN RINYTGFYTA ILERGDEIIS AASLRFHGMQ LAEMPFIGTR HIYRRQGMCR RLFDAIESAM RSLKVEKLVI PAIPDFLHAW TGNFGFTPLD
0901: DSVRKEMRSL NTLVFPGIDM LQKPLLHEEN IIAPAAAGDA MISEVETEKK SEFTSSVEIG PYAVEGDEFV ADAANCYKDI LASDEDNILV SVETAMGTIC
1001: KPKDELSRHF RGEESGISSS PCQITLKSGT KHVLGHICDD TGSSCEDGLT DVNVEADASL LSQEIQQASA SFKVENNLSL SISGRGSSDL SSISQEVKSE
1101: QTSSNLDGVP SCKDYNILVP GAKLDKSKDD AFADGFLL
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:UniProtKB/TrEMBL;Acc:Q9ZW00]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.