Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g083800.1.1 | Tomato | nucleus | 97.52 | 82.56 |
| PGSC0003DMT400009969 | Potato | nucleus | 69.1 | 56.26 |
| VIT_08s0007g04490.t01 | Wine grape | mitochondrion | 30.64 | 50.0 |
| KRH19970 | Soybean | nucleus | 42.76 | 49.25 |
| KRG96074 | Soybean | nucleus | 33.64 | 43.95 |
| KRH32595 | Soybean | nucleus | 42.76 | 42.05 |
| PGSC0003DMT400028730 | Potato | nucleus | 22.69 | 33.85 |
| AT2G36720.1 | Thale cress | cytosol | 40.94 | 31.18 |
| CDY63985 | Canola | nucleus | 39.63 | 29.69 |
| CDY70414 | Canola | cytosol, nucleus | 24.25 | 29.25 |
| Bra017226.1-P | Field mustard | nucleus | 39.63 | 29.17 |
| PGSC0003DMT400001219 | Potato | nucleus | 39.77 | 28.8 |
| CDY68599 | Canola | cytosol | 9.39 | 25.99 |
| PGSC0003DMT400091155 | Potato | nucleus | 4.3 | 16.58 |
| PGSC0003DMT400067527 | Potato | nucleus | 12.13 | 14.95 |
| PGSC0003DMT400032367 | Potato | nucleus | 8.34 | 13.2 |
| PGSC0003DMT400043562 | Potato | nucleus | 12.52 | 10.45 |
| PGSC0003DMT400056776 | Potato | nucleus | 12.65 | 7.97 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 |
| InterPro:IPR019787 | InterPro:Jas | UniProt:M1CQA5 | PFAM:PF00628 | PFAM:PF16135 | EnsemblPlantsGene:PGSC0003DMG400028181 |
| PGSC:PGSC0003DMG400028181 | EnsemblPlants:PGSC0003DMT400072425 | ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF12 |
| SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0002961CBA | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
DNA binding protein [Source:PGSC_GENE;Acc:PGSC0003DMG400028181]
Coordinates
chr10:-:55326027..55335997
Molecular Weight (calculated)
84824.8 Da
IEP (calculated)
9.483
GRAVY (calculated)
-0.474
Length
767 amino acids
Sequence
(BLAST)
(BLAST)
001: MTAKTNREFD ISSPAEEKPP AQSRVPESEP ETGDLNRRKP DEPQVKVSGS NGVVVYRRNK RRKTADSNRN SSGKVVNMDV TKGNLGISAS NGDVVEVEVK
101: EESRSKRFTR SALGRKRELL EITNGNSGGE VDERSDEVMS GTPTKKLEMK MSKKISITVI PETVKELFET GLLEGYPVFY NGGKKGIPLR GTIKDTGILC
201: SCELCKGATV VPPSKFEIHA CNSYRRASEY ICLENGKSLL DVVKECRKGS LKTLEETIQS VIGPVPVKKS IFCRDCKGSF VATLAGNDEQ LCDSCIVSLR
301: SEATPTQSIN TENGVFEPVL NLNSSGTSNM SSVSLRSIKG RKKKKVAIKH SSRQSPSAHT LSRKKWKTPN KVTKPVFAPK SDETSIMCSS FRNNMQGNIS
401: EKLLKSVVVS KYSKVASPGV SVHSRTQWKM TKRDQKMHRL VFEEGGLPEG TEVAYYSRGK KLLVGYKKGS GIFCSCCNTE VSPSQFEAHA GWASRKKPYG
501: YIYTSNGVSL HEFAISLLKG RKSSVKDSDD LCIICADGGK LVLCDGCPRA FHKECASLST IPRGKWYCKY CESMLQREKF AERNTNALAA GRISGIDPIE
601: QITNRCIRFV KNAEEAEFIA CVLCRAYDFS KSGFGPRTVI LCDQCEKEYH VGCLKKSKIA DLKELPKGKW FCSVDCKRIY SALQNLLNSG EERLPDSCLD
701: AARVKEKHNS LVAVGELDVR WRLLSGRISS RETRRLLAEA VSIFHDGFDP IVDSVTGRDF IPSMVYG
101: EESRSKRFTR SALGRKRELL EITNGNSGGE VDERSDEVMS GTPTKKLEMK MSKKISITVI PETVKELFET GLLEGYPVFY NGGKKGIPLR GTIKDTGILC
201: SCELCKGATV VPPSKFEIHA CNSYRRASEY ICLENGKSLL DVVKECRKGS LKTLEETIQS VIGPVPVKKS IFCRDCKGSF VATLAGNDEQ LCDSCIVSLR
301: SEATPTQSIN TENGVFEPVL NLNSSGTSNM SSVSLRSIKG RKKKKVAIKH SSRQSPSAHT LSRKKWKTPN KVTKPVFAPK SDETSIMCSS FRNNMQGNIS
401: EKLLKSVVVS KYSKVASPGV SVHSRTQWKM TKRDQKMHRL VFEEGGLPEG TEVAYYSRGK KLLVGYKKGS GIFCSCCNTE VSPSQFEAHA GWASRKKPYG
501: YIYTSNGVSL HEFAISLLKG RKSSVKDSDD LCIICADGGK LVLCDGCPRA FHKECASLST IPRGKWYCKY CESMLQREKF AERNTNALAA GRISGIDPIE
601: QITNRCIRFV KNAEEAEFIA CVLCRAYDFS KSGFGPRTVI LCDQCEKEYH VGCLKKSKIA DLKELPKGKW FCSVDCKRIY SALQNLLNSG EERLPDSCLD
701: AARVKEKHNS LVAVGELDVR WRLLSGRISS RETRRLLAEA VSIFHDGFDP IVDSVTGRDF IPSMVYG
0001: MKEDLVPESN SSVWQSPVKR LAVDGECGEA GDRSRTSCKR IKTTQVNGFI VYTRTRKTKF TKLHEQEDEN AGLSNHLEES KPTSGVTSGF GGDMCRSSSV
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q8RWG0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.