CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX93373	Canola	nucleus	96.74	95.11
Bra017181.1-P	Field mustard	nucleus	99.53	79.93
AT2G37520.1	Thale cress	nucleus	85.87	66.71
PGSC0003DMT400028730	Potato	nucleus	49.22	61.67
AT3G53680.2	Thale cress	nucleus	78.73	60.14
KRH19715	Soybean	nucleus	63.66	46.12
KRH32312	Soybean	nucleus	63.66	46.02
VIT_08s0040g03340.t01	Wine grape	nucleus	61.49	45.15
CDY68599	Canola	cytosol	19.41	45.13
CDX71404	Canola	extracellular, golgi, vacuole	30.75	38.6
Solyc10g084650.1.1	Tomato	nucleus	59.78	28.54
GSMUA_Achr6P33300_001	Banana	plastid	28.57	27.84
CDX77146	Canola	nucleus	37.58	26.25
Zm00001d027880_P002	Maize	nucleus	19.25	25.46
CDX73252	Canola	cytosol	7.61	25.39
CDY63985	Canola	nucleus	39.75	25.0
CDY04521	Canola	nucleus	36.49	24.56
CDY30516	Canola	nucleus	37.73	23.16
CDY26900	Canola	cytosol, mitochondrion, nucleus	10.09	22.81
CDX84460	Canola	nucleus	15.37	21.57
CDY43768	Canola	nucleus	14.91	20.38
Zm00001d028660_P013	Maize	endoplasmic reticulum	27.02	20.33
OQU93136	Sorghum	cytosol	21.89	20.0
CDX81205	Canola	nucleus	16.61	19.56
HORVU4Hr1G059010.32	Barley	plastid	28.88	19.18
CDY60050	Canola	nucleus	16.3	18.82
OQU92810	Sorghum	cytosol	27.02	18.51
TraesCS4B01G204700.1	Wheat	cytosol	29.04	18.44
TraesCS4A01G099600.1	Wheat	cytosol	29.04	18.44
TraesCS4D01G205600.2	Wheat	cytosol	29.04	18.32
Os03t0278700-01	Rice	cytosol, nucleus	25.93	17.56
CDY70414	Canola	cytosol, nucleus	16.61	16.82
CDY10104	Canola	nucleus	19.88	13.03
CDX74615	Canola	nucleus	19.57	12.63
CDX98519	Canola	nucleus	21.43	12.35
CDY47291	Canola	nucleus	20.34	12.19
CDX97621	Canola	nucleus	20.96	12.12
CDY37657	Canola	nucleus	19.88	12.02
CDX80351	Canola	golgi, plasma membrane	14.29	9.16
CDY52116	Canola	nucleus	16.46	7.42

Protein Annotations

MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	GO:A0A078FZ13	UniProt:A0A078FZ13	InterPro:Acyl_CoA_acyltransferase
EnsemblPlants:CDY18439	ProteinID:CDY18439	ProteinID:CDY18439.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872
EnsemblPlantsGene:GSBRNA2T00005435001	InterPro:IPR013083	InterPro:IPR019787	InterPro:Jas	PFAM:PF00628	PFAM:PF16135
ScanProsite:PS01359	PFscan:PS50016	PANTHER:PTHR42672	PANTHER:PTHR42672:SF4	SMART:SM00249	SUPFAM:SSF55729
SUPFAM:SSF57903	UniParc:UPI0004EEE8A1	InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHD	SEG:seg	:	:	:	:

Description

BnaA04g21480DBnaA04g21480D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FZ13]

Coordinates

chrLK032085:+:473667..478025

Molecular Weight (calculated)

71194.1 Da

IEP (calculated)

7.610

GRAVY (calculated)

-0.284

Length

644 amino acids

Sequence
(BLAST)

001: MLDGAPVKYI SLPRVRELQG VIHSGGYLCG CTNCNFSKQR VLSAYEFELH AGAKTKHPNN HIFLENGRAV YSIVQELKTA PHGVFEDVIR NVAGSALCEE
101: GLQAWKASFQ QSISDRNRIM EHSPVSYNGQ SHDESQSLTP YSLENHYYRE KTYETDALYE PKRIAKKKVA SHVSGTGCHK KVTEGSNRKR DNDLHRLVFM
201: PNGLPDGTEL AYYVKTQKLL AGYKQGNGIV CSCCNKEISP SQFEAHAGMA GRRQPYRHIF ISSGLSLHDI ALSLANGQVI TTGDSDDMCS ICGDGGDLLL
301: CAGCPQAFHT ACLKFQSMPE GTWYCSSCSD GSVSSKKATA NGPSGNSKPI LIRLSRVVKA PESEIGGCVF CRSHDFSIGR FDERTVILCD QCEKEYHVGC
401: LRENGLCDLK EIPQEKWFCC NGCSRIHTAV QSSVSCGPQT IPGPLSEMIR RKDREKGIIT EDGDTVEWRI LSGKSRYPEH LPLLSRAAVI FRECFDPIVA
501: KSGRDLIPVM VYGRNISGQE FGGMYCLVLI VNSLVVSAAL LRIFGQQVAE LPMVATSREY QGRGYFQGLF ACVENLLSSL NVENLVLPAA EEAESIWTNK
601: FGFTKMTEQQ LQNYQKEVQL TVFKGTSMLE KKVPKSLSES TALI

Best Arabidopsis Sequence Match ( AT2G37520.1 )
(BLAST)

001: MGEGTICLEM PKEENGQLKR DRLDDDTDEG NKGDHFPSKK QAKEASNDDI TSEISNPVAS PVESTSLFRD VSSQPVKSGL VECSGSDFGS EETVSDDASV
101: VGSSQTEQSS DVLPSRFVLE IPKHLSSTGI TKITFKLSKP KKEFDDLPLI KDHTWDAGVV KMPKKKIVSL SYPSNVKKLL ETGILEGARV KYISTPPVRQ
201: LLGIIHSGGY LCGCTTCNFS KVLSAYEFEQ HAGAKTRHPN NHIFLENRRA VYNIVQELKT APRVVLEEVI RNVAGSALNE EGLRAWKASF QQSNSMSDRN
301: YITDHSTVSY LGPGLDESQS LTPCSVENHY FSEKTYAKDT LDEPKRIAKK LTSHVSGTGC HKKVSEGSNR KRDNDLHRLL FMPNGLPDGT ELAYYVKTQK
401: LLQGYKQGSG IVCSCCSREI SPSQFEAHAG MAARRQPYRH IFISSGLSLH DIAMSLANGH VITTGDSDDM CSICGDGGDL LLCAGCPQAF HTACLKFQSM
501: PEGTWYCSSC NDGPISSKKA TTTDPSGNAR PIVIRLSRVV KAPESDIGGC VFCRSHDFSI GKFDDRTVIL CDQCEKEYHV GCLRENGFCD LKEIPQEKWF
601: CCSNCSRIHT AVQNSVSCGP QTLPTPLLDM ICRKDREKGI FTDIGDTVEW RILSGKSRYP EHLPLLSRAA VIFRECFDPI VAKSGRDLIP VMVYGRNISG
701: QEFGGMYCLV LIVNSLVVSA ALLRIFGQEV AELPIVATSR EYQGRGYFQG LYACVENLLS SLNVENLVLP AAEEAESIWT KKFGFTKMSD QQLQEYQKEV
801: QLTIFKGTSM LEKKVPKATT GLSESTTLI

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IQY0]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.