Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 74.09 | 50.18 |
| CDX81205 | Canola | nucleus | 76.17 | 26.87 |
| AT5G63900.1 | Thale cress | nucleus | 76.17 | 26.39 |
| CDY60050 | Canola | nucleus | 76.17 | 26.34 |
| CDX84460 | Canola | nucleus | 53.89 | 22.66 |
| CDY43768 | Canola | nucleus | 53.37 | 21.87 |
| Zm00001d008232_P001 | Maize | cytosol | 31.09 | 18.75 |
| KXG31496 | Sorghum | cytosol, extracellular | 7.25 | 13.33 |
| KRH52096 | Soybean | nucleus | 34.2 | 10.93 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 34.72 | 10.4 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 34.2 | 10.22 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 33.16 | 9.77 |
| Zm00001d022583_P001 | Maize | nucleus | 33.16 | 9.14 |
| CDY68599 | Canola | cytosol | 12.44 | 8.66 |
| CDX71404 | Canola | extracellular, golgi, vacuole | 21.76 | 8.19 |
| CDY18439 | Canola | nucleus | 25.39 | 7.61 |
| CDX93373 | Canola | nucleus | 25.39 | 7.48 |
| GSMUA_AchrUn_... | Banana | nucleus | 33.68 | 6.76 |
| CDY10104 | Canola | nucleus | 30.05 | 5.91 |
| CDX80351 | Canola | golgi, plasma membrane | 30.05 | 5.78 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 31.61 | 5.75 |
| CDX74615 | Canola | nucleus | 29.02 | 5.61 |
| CDY47291 | Canola | nucleus | 30.05 | 5.4 |
| CDX98519 | Canola | nucleus | 31.09 | 5.37 |
| CDY37657 | Canola | nucleus | 29.02 | 5.26 |
| CDX77146 | Canola | nucleus | 24.87 | 5.21 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 36.27 | 5.16 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 36.27 | 5.16 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 36.27 | 5.15 |
| CDX97621 | Canola | nucleus | 29.53 | 5.12 |
| CDY63985 | Canola | nucleus | 26.42 | 4.98 |
| CDY52116 | Canola | nucleus | 36.79 | 4.97 |
| Zm00001d028749_P002 | Maize | mitochondrion | 32.64 | 4.95 |
| CDY30516 | Canola | nucleus | 25.39 | 4.67 |
| CDY04521 | Canola | nucleus | 21.76 | 4.39 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 2.07 | 2.21 |
| CDY70414 | Canola | cytosol, nucleus | 7.25 | 2.2 |
Protein Annotations
| EnsemblPlants:CDX73252 | EnsemblPlantsGene:GSBRNA2T00106274001 | Gene3D:3.30.40.10 | GO:A0A078C8S0 | InterPro:IPR013083 | InterPro:IPR019787 |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 |
| PFscan:PS50016 | ProteinID:CDX73252 | ProteinID:CDX73252.1 | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI0004EE73BE |
| MapMan:15.5.30 | : | : | : | : | : |
Description
BnaC05g28540D
Coordinates
chrLK031798:+:2798..4320
Molecular Weight (calculated)
21944.5 Da
IEP (calculated)
6.329
GRAVY (calculated)
-0.331
Length
193 amino acids
Sequence
(BLAST)
(BLAST)
001: MEKKNKKCEK EYVRFWRKDC GPEMNYDVCC LYHRDGELLL CDGCPSAFHY TCLGLSSLPK EKLWFCPCCC CDVCGSIETS GNIKLMTCEQ CQRRFCSHQC
101: SRVTSALKSL LGCKIAVGDE GDLVWTLMRA PNEDEHYADE QISKLGSAVK ILHQGSGRDL VEELIFKKDD VGVGRGFYTV MIEKNNEPIT WLQ
101: SRVTSALKSL LGCKIAVGDE GDLVWTLMRA PNEDEHYADE QISKLGSAVK ILHQGSGRDL VEELIFKKDD VGVGRGFYTV MIEKNNEPIT WLQ
001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.