Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX73252 | Canola | cytosol | 26.39 | 76.17 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 32.67 | 63.86 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 32.67 | 63.86 |
| CDY60050 | Canola | nucleus | 63.73 | 63.62 |
| CDX81205 | Canola | nucleus | 61.4 | 62.52 |
| Bra037758.1-P | Field mustard | nucleus | 63.2 | 61.11 |
| CDX84460 | Canola | nucleus | 45.06 | 54.68 |
| CDY43768 | Canola | nucleus | 44.88 | 53.08 |
| Bra024246.1-P | Field mustard | nucleus | 44.88 | 53.08 |
| Zm00001d008232_P001 | Maize | cytosol | 19.57 | 34.06 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 8.8 | 27.07 |
| KXG31496 | Sorghum | cytosol, extracellular | 5.03 | 26.67 |
| KRH52096 | Soybean | nucleus | 28.19 | 25.99 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 23.16 | 20.03 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 22.98 | 19.81 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 23.16 | 19.69 |
| Zm00001d022583_P001 | Maize | nucleus | 24.42 | 19.43 |
| GSMUA_AchrUn_... | Banana | nucleus | 27.29 | 15.8 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 27.11 | 14.25 |
| AT5G58610.3 | Thale cress | nucleus | 26.57 | 13.52 |
| AT2G37520.1 | Thale cress | nucleus | 19.03 | 12.79 |
| AT1G05380.3 | Thale cress | nucleus | 25.31 | 12.39 |
| AT3G53680.2 | Thale cress | nucleus | 18.31 | 12.1 |
| Zm00001d028749_P002 | Maize | mitochondrion | 26.93 | 11.78 |
| AT3G14980.2 | Thale cress | nucleus | 24.06 | 11.27 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 27.29 | 11.2 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 27.11 | 11.13 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 27.11 | 11.12 |
| AT2G36720.1 | Thale cress | cytosol | 19.21 | 10.63 |
| AT5G36740.1 | Thale cress | nucleus | 22.08 | 10.52 |
| AT4G14920.3 | Thale cress | nucleus | 21.18 | 10.36 |
| AT2G27980.1 | Thale cress | cytosol, plastid | 19.57 | 10.17 |
| AT5G36670.1 | Thale cress | nucleus | 20.83 | 9.72 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | EntrezGene:836510 | UniProt:A0A178UQN6 | ProteinID:AED97813.1 |
| ArrayExpress:AT5G63900 | EnsemblPlantsGene:AT5G63900 | RefSeq:AT5G63900 | TAIR:AT5G63900 | RefSeq:AT5G63900-TAIR-G | EnsemblPlants:AT5G63900.1 |
| TAIR:AT5G63900.1 | InterPro:Acyl_CoA_acyltransferase | Unigene:At.55695 | ProteinID:BAB11038.1 | ProteinID:BAH30648.1 | InterPro:GNAT_dom |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0016740 | GO:GO:0016746 |
| GO:GO:0046872 | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | RefSeq:NP_201195.1 | ProteinID:OAO96118.1 |
| PO:PO:0001078 | PO:PO:0007115 | PO:PO:0007611 | PO:PO:0008019 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009046 | PO:PO:0025022 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 |
| UniProt:Q9FMZ9 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI00000A9041 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
Coordinates
chr5:+:25568644..25570402
Molecular Weight (calculated)
63204.0 Da
IEP (calculated)
7.776
GRAVY (calculated)
-0.514
Length
557 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.