Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43768 | Canola | nucleus | 100.0 | 100.0 |
| Bra037758.1-P | Field mustard | nucleus | 58.17 | 47.57 |
| AT5G63900.1 | Thale cress | nucleus | 53.08 | 44.88 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 26.75 | 44.21 |
| Zm00001d008232_P001 | Maize | cytosol | 20.38 | 30.0 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 9.98 | 25.97 |
| KRH52096 | Soybean | nucleus | 32.48 | 25.33 |
| KXG31496 | Sorghum | cytosol, extracellular | 5.1 | 22.86 |
| Bra002633.1-P | Field mustard | plastid | 18.9 | 21.09 |
| Zm00001d022583_P001 | Maize | nucleus | 26.96 | 18.14 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 23.14 | 16.93 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 23.35 | 16.79 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 22.93 | 16.72 |
| Bra020653.1-P | Field mustard | nucleus | 21.02 | 16.69 |
| GSMUA_AchrUn_... | Banana | nucleus | 30.36 | 14.86 |
| Bra017181.1-P | Field mustard | nucleus | 21.23 | 12.47 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 25.9 | 11.51 |
| Zm00001d028749_P002 | Maize | mitochondrion | 30.57 | 11.31 |
| Bra035350.1-P | Field mustard | nucleus | 23.14 | 10.37 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 29.3 | 10.17 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 29.3 | 10.17 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 29.3 | 10.16 |
| Bra027290.1-P | Field mustard | nucleus | 23.14 | 9.78 |
| Bra011988.1-P | Field mustard | nucleus | 20.59 | 9.67 |
| Bra017226.1-P | Field mustard | nucleus | 20.17 | 9.12 |
| Bra034381.1-P | Field mustard | nucleus | 20.59 | 9.07 |
| Bra002634.1-P | Field mustard | endoplasmic reticulum, vacuole | 0.21 | 0.25 |
Protein Annotations
| EnsemblPlants:Bra024246.1 | EnsemblPlants:Bra024246.1-P | EnsemblPlantsGene:Bra024246 | Gene3D:3.30.40.10 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013083 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF9 | SEG:seg | SMART:SM00249 | SUPFAM:SSF57903 | UniParc:UPI000253F32F | UniProt:M4E642 |
| MapMan:15.5.30 | : | : | : | : | : |
Description
AT5G63900 (E=2e-089) | PHD finger family protein
Coordinates
chrA06:+:14518114..14519529
Molecular Weight (calculated)
52920.9 Da
IEP (calculated)
6.885
GRAVY (calculated)
-0.534
Length
471 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSFLFITV EAEMNPESLR KWLSIAKEGK TTTKGARHFS TKAKKHLSAL GWRFAYVRKG VSRELRYKSP EGKWFNSLVT ACGACLEDED DDDDSSTQEQ
101: DDDNQEAPAS GGVPKKKRTK VCDTAPDKNR SSHLAKKILN EQEKTSDESS KLTPKPKPRF GKSKRTNCDV CCVCHLGGED LLRCNGCPSA IHPACSGLRS
201: IAPDEHVQDW FFCTCCCCDI CNQRRTPGII SMLLTCEQCH RRCHRNCLEP PEPLIDLPWF CSSQCSSVFS ALQKLQGTKI ALVGDEGLVW SLIRVPNDGE
301: QQQLDSAVKM LQRSFKPTPD RFSGRDLVEE LIFSKDSDGV GRKFYTFSVE RNNNPIIVVA MRVGKDVAEI PLLATLTRDS YDRISSMCRA LMDELEKQMS
401: EIGVRRLVLP ALADDVHTWT QQFGFSHMES SERLELLKHG LFDFVGTVMC HKFLKEREEQ GESSPTGGNQ S
101: DDDNQEAPAS GGVPKKKRTK VCDTAPDKNR SSHLAKKILN EQEKTSDESS KLTPKPKPRF GKSKRTNCDV CCVCHLGGED LLRCNGCPSA IHPACSGLRS
201: IAPDEHVQDW FFCTCCCCDI CNQRRTPGII SMLLTCEQCH RRCHRNCLEP PEPLIDLPWF CSSQCSSVFS ALQKLQGTKI ALVGDEGLVW SLIRVPNDGE
301: QQQLDSAVKM LQRSFKPTPD RFSGRDLVEE LIFSKDSDGV GRKFYTFSVE RNNNPIIVVA MRVGKDVAEI PLLATLTRDS YDRISSMCRA LMDELEKQMS
401: EIGVRRLVLP ALADDVHTWT QQFGFSHMES SERLELLKHG LFDFVGTVMC HKFLKEREEQ GESSPTGGNQ S
001: MNSCDIVPME AELSPGAIEE WLSTVKHGKM TENGKRRSDL SIKVKRHLSA LGWVISYYNK RNKKEQRYKS PKGKWFYSLA KACMSCVDQD SQQQLQIVPK
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
101: YDLSCLPSNI ASESSSDVSN QKQKKSKKRG RVEDLDVKST APEKDNHPSA DLIKIVPNFD VAKQQQQKKI IMNREGSDTA VFNGDQEKIR IGLNVDVIHE
201: QQKKRRKMAS EEIRRPKMVK SLKKVLQVME KKQQKNKHEK ESLRFCRKDC SPDMNCDVCC VCHWGGDLLL CDGCPSAFHH ACLGLSSLPE EDLWFCPCCC
301: CDICGSMESP ANSKLMACEQ CQRRFHLTCL KEDSCIVSSR GWFCSSQCNR VFSALENLLG SKIAVGNDGD LVWTLMRAPN EGEHYDDEQI SKLESAVEIL
401: HQGFEPTNDV FSGRDLVEEL IYRKDRTGVG RGFYTVLIER KNEPITVAAV RVDKDVVEIP LVATLSSYRR SGMCRVLMDE LEKQMSQMGV CRLVLPAAKE
501: VVTTWTERFG FSVMNSSERL ELVKHGMLDF VGTIMCHKFL QKERAENDSA EESSLTE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:Q9FMZ9]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.