Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX74615 | Canola | nucleus | 89.82 | 94.59 |
| AT5G36740.1 | Thale cress | nucleus | 64.41 | 57.91 |
| AT5G36670.1 | Thale cress | nucleus | 63.08 | 55.57 |
| Bra020653.1-P | Field mustard | nucleus | 19.31 | 34.23 |
| Os03t0747600-02 | Rice | nucleus | 23.98 | 32.94 |
| GSMUA_Achr4P21300_001 | Banana | nucleus | 25.4 | 32.6 |
| Bra002633.1-P | Field mustard | plastid | 11.23 | 27.96 |
| KRH71410 | Soybean | nucleus | 28.64 | 25.51 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 6.37 | 23.51 |
| Bra024246.1-P | Field mustard | nucleus | 10.37 | 23.14 |
| Solyc09g065340.2.1 | Tomato | nucleus | 27.78 | 21.47 |
| Bra037758.1-P | Field mustard | nucleus | 11.61 | 21.18 |
| OQU90997 | Sorghum | nucleus | 26.93 | 20.54 |
| TraesCS5D01G396100.1 | Wheat | nucleus | 26.64 | 20.42 |
| TraesCS5A01G386300.1 | Wheat | nucleus | 26.36 | 20.2 |
| TraesCS5B01G391200.1 | Wheat | nucleus | 26.64 | 20.03 |
| HORVU5Hr1G094760.8 | Barley | nucleus | 25.69 | 20.0 |
| GSMUA_Achr5P02880_001 | Banana | nucleus | 27.4 | 19.59 |
| VIT_07s0151g00870.t01 | Wine grape | nucleus | 29.5 | 19.2 |
| Bra027290.1-P | Field mustard | nucleus | 20.17 | 19.03 |
| TraesCS2A01G235700.1 | Wheat | nucleus | 25.98 | 18.21 |
| TraesCS2B01G257600.3 | Wheat | nucleus | 25.88 | 18.18 |
| TraesCS2D01G238100.1 | Wheat | nucleus | 25.79 | 18.09 |
| EER95921 | Sorghum | nucleus | 25.12 | 18.07 |
| HORVU2Hr1G054040.7 | Barley | nucleus | 23.79 | 17.15 |
| Bra017181.1-P | Field mustard | nucleus | 12.75 | 16.71 |
| Os07t0173400-01 | Rice | cytosol | 7.04 | 14.74 |
| Bra017226.1-P | Field mustard | nucleus | 12.65 | 12.76 |
| Bra011988.1-P | Field mustard | nucleus | 11.61 | 12.16 |
| Bra034381.1-P | Field mustard | nucleus | 11.8 | 11.59 |
| Zm00001d034422_P001 | Maize | cytosol | 0.29 | 2.38 |
| Os07t0173700-00 | Rice | plastid | 0.29 | 2.03 |
| Os07t0173501-00 | Rice | cytosol, extracellular | 0.29 | 1.97 |
| Bra002634.1-P | Field mustard | endoplasmic reticulum, vacuole | 0.67 | 1.75 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:AT_hook_DNA-bd_motif | InterPro:Acyl_CoA_acyltransferase | EnsemblPlantsGene:Bra035350 |
| EnsemblPlants:Bra035350.1 | EnsemblPlants:Bra035350.1-P | ncoils:Coil | InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0016740 | GO:GO:0046872 |
| InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:M4F2Q1 | PFAM:PF16135 |
| PRINTS:PR00929 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF16 |
| SMART:SM00249 | SMART:SM00384 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI000253E60B | InterPro:Zinc_finger_PHD-type_CS |
| InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : |
Description
AT5G36740 (E=2e-288) | PHD finger family protein
Coordinates
chrScaffold000104:-:38201..42600
Molecular Weight (calculated)
116855.0 Da
IEP (calculated)
7.507
GRAVY (calculated)
-0.685
Length
1051 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPEERNGSKE EGFQLQGCSS EPGLEAESVT EMKNKKTVKP IDREVNNITR KVLRSGSVAI DTDKHDVAVE EKGDDLSEVD EVKEEKALLS VANDTEHDVA
0101: VEEEIKGDVS EVDKISCEVK EEAQVKRKRG RPRKLQISSQ SDGNEEKTKV SLAEELKVKR KRGRPRKFPI TGGQSDTTPD TVDSIDDSSR PKRNCGSRAK
0201: GPESDGRGRK MGHKRGRPKT KKKPGETDEL DCKATMRLRP CESSLKSRHN NKPLGDGEMR SGEEKIDDGR RSKLQSKKRL SDRILQLLLA AGWTVEYRPR
0301: KERAYNAAVY VNPEGKTHWS VTKAYEVYKT NLERSMTDHY QVDSGLGLLP EEDLHLLRRK VHKKRSDTGK PRKDTDTTNE DTVVSRKRLG EKAQKKRKVS
0401: HKFERSSVSV RKIKREEKHN RKRGALSARS SLSDADSNEN GYILFEGKRT MLGWMIDSAI VPLNGKVECK NTQGIITKEG IRCNCCAELF SALDFEVHSG
0501: GKPFKSLYVE GGNSILQCFL ESWNKQSEAV LKGFHVVDFG SGDQNDDTCA ICGDGGDLTC CDGCPSTFHQ SCLGIKKFPA GSWFCCNCSC KFCEKVEAAN
0601: HGTTTTLSPL LRCHLYHQAC IKQDGTVPVE SSTLPFCGKY CQELFDGLQL LIGVKHSLPE GFSWTFLRRF EMPREVSDSD ISEKVAYNAK LAVAFSVMDE
0701: CFSPLVDHRS GVNLLENIVY NFGSNFHRLN YSNFLTAVLE RGDEIIGVAS IRIHGNQLAE MPFIGTRYMY RRQGMCRRLM NGIESALSSL KVDKLIIPAV
0801: PELMDTWTSG FGFTPVSESA RKTIKNLNLV VFPGVDMLEK SLAKDNGELL LAAEMSLPVD VEETKPEECK DELDCGTADA ESPSYQVDSC LKSMDVVKGV
0901: NDTDLNLKSL EEKEEIGTGK LTDKEVDLPH VVVVDNQRES NLGVNDVTHE DQTDRKRQQS GDLKSSGVKA EGTEEPDEES DCFIIENSQP LGNGGTEKKI
1001: GSKALSLKKG VASRLRVSPR LIQGSWGTSR VNKRYTGTNA VLIGSSHGRC V
0101: VEEEIKGDVS EVDKISCEVK EEAQVKRKRG RPRKLQISSQ SDGNEEKTKV SLAEELKVKR KRGRPRKFPI TGGQSDTTPD TVDSIDDSSR PKRNCGSRAK
0201: GPESDGRGRK MGHKRGRPKT KKKPGETDEL DCKATMRLRP CESSLKSRHN NKPLGDGEMR SGEEKIDDGR RSKLQSKKRL SDRILQLLLA AGWTVEYRPR
0301: KERAYNAAVY VNPEGKTHWS VTKAYEVYKT NLERSMTDHY QVDSGLGLLP EEDLHLLRRK VHKKRSDTGK PRKDTDTTNE DTVVSRKRLG EKAQKKRKVS
0401: HKFERSSVSV RKIKREEKHN RKRGALSARS SLSDADSNEN GYILFEGKRT MLGWMIDSAI VPLNGKVECK NTQGIITKEG IRCNCCAELF SALDFEVHSG
0501: GKPFKSLYVE GGNSILQCFL ESWNKQSEAV LKGFHVVDFG SGDQNDDTCA ICGDGGDLTC CDGCPSTFHQ SCLGIKKFPA GSWFCCNCSC KFCEKVEAAN
0601: HGTTTTLSPL LRCHLYHQAC IKQDGTVPVE SSTLPFCGKY CQELFDGLQL LIGVKHSLPE GFSWTFLRRF EMPREVSDSD ISEKVAYNAK LAVAFSVMDE
0701: CFSPLVDHRS GVNLLENIVY NFGSNFHRLN YSNFLTAVLE RGDEIIGVAS IRIHGNQLAE MPFIGTRYMY RRQGMCRRLM NGIESALSSL KVDKLIIPAV
0801: PELMDTWTSG FGFTPVSESA RKTIKNLNLV VFPGVDMLEK SLAKDNGELL LAAEMSLPVD VEETKPEECK DELDCGTADA ESPSYQVDSC LKSMDVVKGV
0901: NDTDLNLKSL EEKEEIGTGK LTDKEVDLPH VVVVDNQRES NLGVNDVTHE DQTDRKRQQS GDLKSSGVKA EGTEEPDEES DCFIIENSQP LGNGGTEKKI
1001: GSKALSLKKG VASRLRVSPR LIQGSWGTSR VNKRYTGTNA VLIGSSHGRC V
0001: MLETNEQKGF DLNVCASIED FSESDIKAEG ETDSLVDGNV ENVIEIKDKK KVIEREILIT RRVLRSGSVA RDLVNSDKHC KAVKRKGNVV SGGSSVDEVK
0101: EEVKQECVKS LVPEEIRGDD FRSEVKVESK DDRSDDGKEE KVQRKRGRPR KFGMSSQSDD NGLISNCKLR TSLGKKKELV GDDNVEKLVG GSCFNKEKAE
0201: VKLEHGEYAE DKEILGLDFR SQVKVEIKDD ECGIVELHDE ELQVKRKRGR PRKVQISSQS DESRPNTNCK LARTPELSSQ SSVDRISLSR LRGRPPKTKE
0301: TSVSLYIEKG PESNGRRMVR KRGRPPTPQK KRKSGMTDES DWKAKKRLKL CESPLESRHN NPLIDDERMI GEQRSKQTEA GGHSRSKSKK MLSDRILQLL
0401: LTAGWTVEYR PRNGRAYQDA VYLNPEGKTH WSVTKAYQVY KKQLESNPND QKNSTTGSGF GLLPEEDLHL LERTIQKKRS DTGKQRSKLK DRDTNDILVS
0501: TKGTGKIKRE EKHSRKRCTP SARSSLKDVD SKEDGYILFE GKRTMLGWMI DSTIVPLNGK VQCMDCKKTD ILLEGIITKE GIRCNCCDEV FSVLDFEVHA
0601: GGNRNQPFKS LYLEGGNSLL QCLHESMNKQ SESQLKGYHF VDFGSGDPND DTCGICGDGG DLICCDGCPS TFHQSCLDIK KFPSGAWYCY NCSCKFCEKD
0701: EAAKHETSTL PSLSSCRLCE EKYHQACINQ DGTVPGERST DSFCGKYCQE LFEELQLFIG VKHPLPEGFS WSFLRRFELP SEVADCDISE KIAYNAKMAV
0801: AFSVMDECFS PLVDHRSGVN LLQNIVYNFG SNFHRLDFSS FLTAVLERGD EIIAVASIRI HGNQLAEMPF IGTRYMYRRQ GMCRRLMDGI ESALGSLKVD
0901: KLVIPAVPEL IDTWTSGFGF APVNDSEKKT IKNLNLLVFP GVDMLGKSLV KEKITDSVVS SPNGLVLLAP EMTLPVDVEE NKPEESKDSA HERNCATAGV
1001: ESPSNPVDSC LKLTYVEEGD NDRESNLKLL DGSVEEKEDT KKLTDIDINS LPDEVDDSHA DQSDTKEQEI DDKEDKTPLS DDGCEGKAEG TKESNQQPDS
1101: NKVDNSQPLG NGGTGEELGN RTLALKREVT PTLRASPRLI QRSWRTSRVN QKFTGTTNAV LLDSPHRCV
0101: EEVKQECVKS LVPEEIRGDD FRSEVKVESK DDRSDDGKEE KVQRKRGRPR KFGMSSQSDD NGLISNCKLR TSLGKKKELV GDDNVEKLVG GSCFNKEKAE
0201: VKLEHGEYAE DKEILGLDFR SQVKVEIKDD ECGIVELHDE ELQVKRKRGR PRKVQISSQS DESRPNTNCK LARTPELSSQ SSVDRISLSR LRGRPPKTKE
0301: TSVSLYIEKG PESNGRRMVR KRGRPPTPQK KRKSGMTDES DWKAKKRLKL CESPLESRHN NPLIDDERMI GEQRSKQTEA GGHSRSKSKK MLSDRILQLL
0401: LTAGWTVEYR PRNGRAYQDA VYLNPEGKTH WSVTKAYQVY KKQLESNPND QKNSTTGSGF GLLPEEDLHL LERTIQKKRS DTGKQRSKLK DRDTNDILVS
0501: TKGTGKIKRE EKHSRKRCTP SARSSLKDVD SKEDGYILFE GKRTMLGWMI DSTIVPLNGK VQCMDCKKTD ILLEGIITKE GIRCNCCDEV FSVLDFEVHA
0601: GGNRNQPFKS LYLEGGNSLL QCLHESMNKQ SESQLKGYHF VDFGSGDPND DTCGICGDGG DLICCDGCPS TFHQSCLDIK KFPSGAWYCY NCSCKFCEKD
0701: EAAKHETSTL PSLSSCRLCE EKYHQACINQ DGTVPGERST DSFCGKYCQE LFEELQLFIG VKHPLPEGFS WSFLRRFELP SEVADCDISE KIAYNAKMAV
0801: AFSVMDECFS PLVDHRSGVN LLQNIVYNFG SNFHRLDFSS FLTAVLERGD EIIAVASIRI HGNQLAEMPF IGTRYMYRRQ GMCRRLMDGI ESALGSLKVD
0901: KLVIPAVPEL IDTWTSGFGF APVNDSEKKT IKNLNLLVFP GVDMLGKSLV KEKITDSVVS SPNGLVLLAP EMTLPVDVEE NKPEESKDSA HERNCATAGV
1001: ESPSNPVDSC LKLTYVEEGD NDRESNLKLL DGSVEEKEDT KKLTDIDINS LPDEVDDSHA DQSDTKEQEI DDKEDKTPLS DDGCEGKAEG TKESNQQPDS
1101: NKVDNSQPLG NGGTGEELGN RTLALKREVT PTLRASPRLI QRSWRTSRVN QKFTGTTNAV LLDSPHRCV
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT5G36740]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.