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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d013278_P004 Maize nucleus 85.49 81.02
Zm00001d034004_P004 Maize nucleus 84.25 78.87
Os03t0747600-02 Rice nucleus 37.88 68.24
TraesCS5D01G396100.1 Wheat nucleus 57.98 58.28
TraesCS5A01G386300.1 Wheat nucleus 57.33 57.62
HORVU5Hr1G094760.8 Barley nucleus 55.44 56.59
TraesCS5B01G391200.1 Wheat nucleus 57.33 56.51
GSMUA_Achr4P21300_001 Banana nucleus 24.38 41.03
KXG31496 Sorghum cytosol, extracellular 3.05 40.0
Bra020653.1-P Field mustard nucleus 15.46 35.92
KRH27632 Soybean nucleus 21.34 31.65
Solyc03g005170.2.1 Tomato nucleus 24.6 30.71
CDY10104 Canola nucleus 21.84 30.65
KRH77859 Soybean nucleus 23.66 29.64
CDY47291 Canola nucleus 22.42 28.74
OQU88240 Sorghum cytosol 7.76 28.53
CDX74615 Canola nucleus 20.54 28.36
AT1G05380.3 Thale cress nucleus 22.93 27.77
AT4G14920.3 Thale cress nucleus 22.93 27.74
CDY37657 Canola nucleus 20.83 26.95
Bra035350.1-P Field mustard nucleus 20.54 26.93
KRH27635 Soybean nucleus 25.54 26.87
KRH77858 Soybean nucleus 25.69 26.84
AT5G36740.1 Thale cress nucleus 22.35 26.35
VIT_05s0020g03420.t01 Wine grape nucleus 26.85 25.84
Solyc09g076010.2.1 Tomato nucleus 25.54 25.81
AT5G36670.1 Thale cress nucleus 21.63 24.98
Solyc09g065340.2.1 Tomato nucleus 23.8 24.12
GSMUA_Achr5P02880_001 Banana nucleus 25.18 23.61
KRH71410 Soybean nucleus 20.1 23.47
EER95921 Sorghum nucleus 22.06 20.81
KXG24184 Sorghum nucleus 14.66 19.78
OQU90556 Sorghum mitochondrion 11.32 19.65
VIT_07s0151g00870.t01 Wine grape nucleus 22.79 19.44
KXG21396 Sorghum plastid 12.99 19.23
KRH27633 Soybean cytosol, nucleus 4.5 18.62
KXG20990 Sorghum nucleus 10.52 16.31
OQU82646 Sorghum nucleus 15.82 15.99
OQU93136 Sorghum cytosol 7.91 15.46
KXG39596 Sorghum plasma membrane 13.43 14.71
EES12185 Sorghum nucleus 13.93 13.93
KXG19082 Sorghum nucleus 9.14 13.82
OQU92810 Sorghum cytosol 8.49 12.45
EER90748 Sorghum cytosol 0.0 0.0
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30UniProt:A0A1Z5S4W8InterPro:Acyl_CoA_acyltransferaseInterPro:GNAT_dom
GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008080GO:GO:0016740GO:GO:0046872
InterPro:IPR000182InterPro:IPR013083InterPro:IPR019787InterPro:JasEnsemblPlants:OQU90997ProteinID:OQU90997
ProteinID:OQU90997.1PFAM:PF16135ScanProsite:PS01359PFscan:PS50016PFscan:PS51186PANTHER:PTHR42672
PANTHER:PTHR42672:SF14SMART:SM00249EnsemblPlantsGene:SORBI_3001G090800SUPFAM:SSF55729SUPFAM:SSF57903UniParc:UPI000B8B9E7B
InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg
Description
hypothetical protein
Coordinates
chr1:-:7026935..7036376
Molecular Weight (calculated)
150537.0 Da
IEP (calculated)
6.684
GRAVY (calculated)
-0.700
Length
1378 amino acids
Sequence
(BLAST)
0001: MPNATGLEMG LKGSKGAPMP GKEGIVAKDL KKAPASLEEN KSSGDEDLGG GPVLTGKKRK DRRGSSDEDR SGVTKRVLRS DAMKLRAEAE AACGVGVEVS
0101: KTYCLEKKHC EAIVEAESCK GRVPMEVTCN GEEANGLVNL DASDVSEESA RCSENNMGMP GVPAADISQG DGLGTQGSNA ESDDKTVKSD EKVSAVTHSK
0201: QNDSRAGINS SVDEAQDNKV RHGPCQGEVI DSAIANDADT STDLTKIIPT SGSESVKQED SKQENNVDHT EEVILHSSDP EVEKHSHIDD VCTETEISLT
0301: ENGRCTVDNH TDLTGCTKQE ERGIPVNEAN DVSSHDIVFT RRGRKSCEAK QGTCGEESRF EKRVTRSATV RQREVSGSSR KSTTNEAALG SRGKKGDIVA
0401: HYTRKVNSAL SPKGHHAELG ERNTSMEKQT VKEKVVDHRD SGVTENDNHV NGTEIKESEN ETGINLKTQP TVGSVSVVKK TTGAAVSAVD QNISGSAITE
0501: RNDMEHTDSD GVKSENKTPV QKPLLSVGAK IVASKKRILE AGLDKITGRS PIALPSMKKT RNTSCDPEID QPDKSSGEKL IGNNTDLGNK RVLRERQHRN
0601: QTNLSSRSPN HSNQNAIKQT QDQSDDDEIS SDTSYRRSRS GRRRGAARLV VPKQEDSSDS EEVVVKKNRR KRKKSVHKQR AGSKLKHTSG PSKAGRLGRP
0701: PLIKSESSSL SLHPGKGKMK VPKGTRTLRE EKQKISDQIK AMLLDAGWTI DLRPRNGRDY MDSVYIPPSG KGSYWSVTKA YYAFCASMES EQKESSKDQI
0801: LSKKSVGSPG KKQVSSSPGC TLTEDILSKL KRVVVNKRTT KVAIQRLKQK RFKKEKKKNA NSRRLHLGNE RKKRGGCALL VRGSNKESGS GTDGFVPYEW
0901: KRTIFSWLID LDVLSVNTKL KCMDESNSKV LLEGIVTRDG IDCSCCSKVL SVLEFVAHAG SEVNTPYRNI LVDGQDIDLL HCLINAWNMQ SDAEKQDFFP
1001: VSIEGDDPND DTCGICGDGG NLICCDGCPS TFHMSCLGLE ELPSDYWCCA NCSCKFCHEH SNDGAEDTAD VDSSLHTCSQ CEEQYHEACS PENDSITNLS
1101: SQTGNLFCQQ SCRLLFEELQ NLLAVKKDLE PEYSCRVVQR IHEDVPEEVL PLDTRVECNS KIAVALSLMD ECFLPIVDQR TGINLIRNVV YSCGSNFARL
1201: DFRGFYIFIL ERGDEIIAAA SVRIHGTKLA EMPFIGTRNM YRRQGMCRRL VDGIEMILSS LNVEKLIIPA ITELVDTWTS RFGFSPLEDS EKEEVKSISM
1301: LVFPGTGLLQ KPLLKALPKG GQCSQGDKTE KSPDVANEDS LCSDASVDPL DLGVKEPGDN SKNADGTCSD VSQQSPHS
Best Arabidopsis Sequence Match ( AT5G36740.5 )
(BLAST)
0001: MLETNEQKGF DLNVCASIED FSESDIKAEG ETDSLVDGNV ENVIEIKDKK KVIEREILIT RRVLRSGSVA RDLVNSDKHC KAVKRKGNVV SGGSSVDEVK
0101: EEVKQECVKS LVPEEIRGDD FRSEVKVESK DDRSDDGKEE KVQRKRGRPR KFGMSSQSDD NGLISNCKLR TSLGKKKELV GDDNVEKLVG GSCFNKEKAE
0201: VKLEHGEYAE DKEILGLDFR SQVKVEIKDD ECGIVELHDE ELQVKRKRGR PRKVQISSQS DESRPNTNCK LARTPELSSQ SSVDRISLSR LRGRPPKTKE
0301: TSVSLYIEKG PESNGRRMVR KRGRPPTPQK KRKSGMTDES DWKAKKRLKL CESPLESRHN NPLIDDERMI GEQRSKQTEA GGHSRSKSKK MLSDRILQLL
0401: LTAGWTVEYR PRNGRAYQDA VYLNPEGKTH WSVTKAYQVY KKQLESNPND QKNSTTGSGF GLLPEEDLHL LERTIQKKRS DTGKQRSKLK DRDTNDILVS
0501: TKGTGKIKRE EKHSRKRCTP SARSSLKDVD SKEDGYILFE GKRTMLGWMI DSTIVPLNGK VQCMDCKKTD ILLEGIITKE GIRCNCCDEV FSVLDFEVHA
0601: GGNRNQPFKS LYLEGGNSLL QCLHESMNKQ SESQLKGYHF VDFGSGDPND DTCGICGDGG DLICCDGCPS TFHQSCLDIK KFPSGAWYCY NCSCKFCEKD
0701: EAAKHETSTL PSLSSCRLCE EKYHQACINQ DGTVPGERST DSFCGKYCQE LFEELQLFIG VKHPLPEGFS WSFLRRFELP SEVADCDISE KIAYNAKMAV
0801: AFSVMDECFS PLVDHRSGVN LLQNIVYNFG SNFHRLDFSS FLTAVLERGD EIIAVASIRI HGNQLAEMPF IGTRYMYRRQ GMCRRLMDGI ESALGSLKVD
0901: KLVIPAVPEL IDTWTSGFGF APVNDSEKKT IKNLNLLVFP GVDMLGKSLV KEKITDSVVS SPNGLVLLAP EMTLPVDVEE NKPEESKDSA HERNCATAGV
1001: ESPSNPVDSC LKLTYVEEGD NDRESNLKLL DGSVEEKEDT KKLTDIDINS LPDEVDDSHA DQSDTKEQEI DDKEDKTPLS DDGCEGKAEG TKESNQQPDS
1101: NKVDNSQPLG NGGTGEELGN RTLALKREVT PTLRASPRLI QRSWRTSRVN QKFTGTTNAV LLDSPHRCV
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT5G36740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.