CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 3
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG31496	Sorghum	cytosol, extracellular	4.02	39.05
PGSC0003DMT400032367	Potato	nucleus	18.41	38.76
OQU82646	Sorghum	nucleus	50.54	37.86
GSMUA_AchrUn_...	Banana	nucleus	27.52	27.9
OQU88240	Sorghum	cytosol	9.5	25.87
Solyc07g062600.2.1	Tomato	nucleus	28.7	25.68
CDX97621	Canola	nucleus	25.86	23.7
CDX98519	Canola	nucleus	25.76	23.55
Bra027290.1-P	Field mustard	nucleus	25.56	23.43
KRH27324	Soybean	nucleus	29.68	23.11
KRH21991	Soybean	nucleus	29.68	23.06
AT3G14980.2	Thale cress	nucleus	26.25	22.54
VIT_19s0014g01500.t01	Wine grape	nucleus	30.85	22.25
EES12185	Sorghum	nucleus	28.89	21.41
OQU90556	Sorghum	mitochondrion	15.57	20.03
KXG21396	Sorghum	plastid	17.04	18.69
KXG20990	Sorghum	nucleus	13.22	15.19
OQU90997	Sorghum	nucleus	19.78	14.66
KXG19082	Sorghum	nucleus	12.14	13.6
EER95921	Sorghum	nucleus	18.71	13.07
OQU93136	Sorghum	cytosol	8.81	12.77
KXG39596	Sorghum	plasma membrane	15.38	12.48
OQU92810	Sorghum	cytosol	9.79	10.64
EER90748	Sorghum	cytosol	0.0	0.0

Protein Annotations

MapMan:12.5.3.2.2	MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	UniProt:A0A1B6PES5	InterPro:Acyl_CoA_acyltransferase
InterPro:GNAT_dom	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0008080	GO:GO:0016740
GO:GO:0046872	InterPro:IPR000182	InterPro:IPR013083	InterPro:IPR019787	InterPro:Jas	EnsemblPlants:KXG24184
ProteinID:KXG24184	ProteinID:KXG24184.1	PFAM:PF16135	PFscan:PS50016	PFscan:PS51186	PANTHER:PTHR42672
PANTHER:PTHR42672:SF15	SMART:SM00249	EnsemblPlantsGene:SORBI_3007G005200	SUPFAM:SSF55729	SUPFAM:SSF57903	UniParc:UPI00081AD94F
InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg	:

Description

hypothetical protein

Coordinates

chr7:+:453430..461703

Molecular Weight (calculated)

112757.0 Da

IEP (calculated)

7.769

GRAVY (calculated)

-0.368

Length

1021 amino acids

Sequence
(BLAST)

0001: MAASDGGEAE ALKEQDAASR LEAAAVAEHV LGLPDHGDCS AAPAPAVVHG CRNGMPGSPE HGVAAQEAFF RSEANPAPKS TARQQLGGAG DCYYYRKRRD
0101: PKCRAARSSK AVVSSKRSSS RDLSDQLEAH ARRLLMDAGW RIRPRIRKDR PRVAYYFTAP QREAVLASLS QAWRLCGQRL RSAAGGLELG QCPAEWSDVD
0201: QFWKDLVDAM DSVGNMAVDG SATLLRRWQL LDPFVAVVFI DKRITALQKQ KRIRAVDSST CFVDCYGDDR PSTDKPTTTS PCSGHQHMMT IDIEDSGQAE
0301: NHIQLNAKPA HSYSGANLDN TLVKRVRKKS RWLYDFESTG LNGLYAQSFM QPFVPLSESG SCLVGNGTLK KHVKSRNESM PSESNGCSVA KSTVTESDAK
0401: KDASAKKQQC RSRKQSLARG LSEHVVTVSN VSNVVVKSCE KHNATMVECS TSLEAQSHKE PTIASKSKIF EKQAKKRPFE MHFNDDDLLI AAIVKKRDIS
0501: SCRKNELRLV SSKAKFRKLK SSKKDSRLLI RKGGTDVLDG RQIVLARKTV LCWLIATGFV TLKDIVQYRN PENNEVLKDG WVTWDGILCS CCSKTLSISD
0601: FKAHAMISLP RSSLNLCLQS GKSFTLCQIE AWNAEYMDRR SNACRRKVEA ADGNDDTCGF CGDGGELLCC DNCPSTYHQS CLSVKELPDD SWYCHNCICR
0701: ICGCPVTEKE ISSFSAIIKC LQCGAAHHDT CVEMGATAFE EMDSDEWFCG THCKEIYLGL HGCVGVESSL GDGLSWTILR CNSGGQKMHS VQKIAHAIEC
0801: NSKLAVALTL MEECFAQMVD TRTGINMIPH VLYNQGSKYA RLNYQGFYTV ILEKGEEILC AASIRVHGMK AAELPFIATC REHRRKGMCR RLINTIEEML
0901: KSFHVKMLVL SAIPELVSTW VSGFGFKPIE EYERKQLDTI NLMLFPGTSL LIKSLEDGTL TEKSGAGNDT YDVLGLPDDY CVPNGNDNEH FEEVGSDFIE
1001: SHKEKLAAEN ANLQNGIILP S

Best Arabidopsis Sequence Match ( AT3G14980.6 )
(BLAST)

0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE

Arabidopsis Description

IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.