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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • mitochondrion 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018912_P007 Maize nucleus 87.82 88.24
TraesCS2A01G235700.1 Wheat nucleus 52.57 51.23
TraesCS2D01G238100.1 Wheat nucleus 52.16 50.87
TraesCS2B01G257600.3 Wheat nucleus 52.02 50.8
HORVU2Hr1G054040.7 Barley nucleus 50.1 50.21
Os07t0173400-01 Rice cytosol 15.47 45.02
KXG31496 Sorghum cytosol, extracellular 2.6 36.19
Bra020653.1-P Field mustard nucleus 14.44 35.58
KRH27632 Soybean nucleus 19.64 30.89
KRH77859 Soybean nucleus 23.07 30.64
CDY10104 Canola nucleus 20.12 29.94
OQU88240 Sorghum cytosol 7.53 29.33
KRH77858 Soybean nucleus 25.87 28.66
KRH27635 Soybean nucleus 25.67 28.63
Solyc03g005170.2.1 Tomato nucleus 21.63 28.62
CDY47291 Canola nucleus 21.01 28.56
AT1G05380.3 Thale cress nucleus 21.49 27.59
AT4G14920.3 Thale cress nucleus 21.29 27.3
CDX74615 Canola nucleus 18.14 26.55
KRH71410 Soybean nucleus 21.08 26.1
VIT_05s0020g03420.t01 Wine grape nucleus 25.19 25.7
CDY37657 Canola nucleus 18.69 25.63
Bra035350.1-P Field mustard nucleus 18.07 25.12
Solyc09g076010.2.1 Tomato nucleus 22.86 24.49
AT5G36740.1 Thale cress nucleus 19.58 24.47
KRH27633 Soybean cytosol, nucleus 5.48 24.02
Solyc09g065340.2.1 Tomato nucleus 22.11 23.75
AT5G36670.1 Thale cress nucleus 18.89 23.14
OQU90997 Sorghum nucleus 20.81 22.06
VIT_07s0151g00870.t01 Wine grape nucleus 23.34 21.11
OQU90556 Sorghum mitochondrion 10.54 19.4
KXG21396 Sorghum plastid 11.98 18.8
KXG24184 Sorghum nucleus 13.07 18.71
KXG20990 Sorghum nucleus 9.92 16.31
OQU82646 Sorghum nucleus 13.96 14.97
KXG39596 Sorghum plasma membrane 12.87 14.94
KXG19082 Sorghum nucleus 8.97 14.36
EES12185 Sorghum nucleus 13.21 14.01
OQU93136 Sorghum cytosol 6.37 13.19
OQU92810 Sorghum cytosol 6.37 9.89
Os07t0173501-00 Rice cytosol, extracellular 0.14 1.32
EER90748 Sorghum cytosol 0.14 1.32
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10InterPro:Acyl_CoA_acyltransferaseUniProt:C5XAE3EnsemblPlants:EER95921ProteinID:EER95921
ProteinID:EER95921.2GO:GO:0003674GO:GO:0005488GO:GO:0046872InterPro:IPR013083InterPro:IPR019787
InterPro:JasPFAM:PF00628PFAM:PF16135PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF16
SMART:SM00249EnsemblPlantsGene:SORBI_3002G049200SUPFAM:SSF55729SUPFAM:SSF57903UniParc:UPI00081ABD9FInterPro:Znf_FYVE_PHD
InterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
hypothetical protein
Coordinates
chr2:+:4645994..4655575
Molecular Weight (calculated)
159664.0 Da
IEP (calculated)
8.500
GRAVY (calculated)
-0.663
Length
1461 amino acids
Sequence
(BLAST)
0001: MGSDGEGRGS KAAAATRPRK RQLVMESSDS EDDEFCISTR QNASGAASVG NAGAGSQGGG DQSGEKPVTA SPEKVSGVKS SGGDGLEKKT GVELESSSSQ
0101: PAAKRIRVET VHGDGSGRSG GASKSGTGGK MLPRGLPTWR FERPEVRGGR VLDDKGGVVG MKASSASKMK EQASSLGDKR RHVELQKHER RAPLKTDQGK
0201: SIDSGQHEVL RLQGKRGVLR ILPKHDKVAR DTGGGKILSR QTEVDVETGK CRIPTKSGVL KLLPKNNGAA MESNDCKLMS KKVNKVDEET GDDKMPMKNT
0301: KVVDKETSDG KTLAIKTKLD GEFGGHKVPM KNSTVDMETV TEKFQHRNSK ADGETKERYK GYEEKSGAPA EFRKQDANGE KRVVGKLLSP VALRKSDPSV
0401: VGVSLGPKMK QQSSKQQLKN YSLSLKDDST KPSEQKNLKK RLLEHKGSSE SLSKKAQSKA VDLQGTSGPV LNKLGMKKPR GGPLYTHKQD LRNKIKRVLL
0501: DNGWKIDLRQ RKNKDYEDSV YVSPAGVGYW SITKAYAVFQ EQFQNMGRSS KLNNTKPGAS DAISKDDLAL LKKNIVKRRT NKEICSAEKK PGVSRNRSRS
0601: SKDILANRGS RNKHQNKEDR VKDRRCGLLV RGSTHDAEDN MDGYIPYEWK RTVYSWMIDL GVVSEDMQVK YMNNNRTREM LAGKITREGI FCGCCSKILT
0701: VGKFELHAGS KEKKPYANIF LEGGKVSLLQ CLLDAWEKHT LCENKGFYKI DKGEDEHDDT CAICGDGGDL VCCDHCASTF HLDCLGIKLP SGDWYCRSCL
0801: CRFCGFPQEK PSSSPELLLS CLQCSRKYHQ TCSSGTGTDF DCTIPGTSID CFCSPGCRKI YKRLNKLLGI KNHMEAGFSW SLVHCFPNDQ AMPPKNKEKM
0901: AQCNSKIALA FTVLDECFQP HIDERSGINM IHNVAYNCGS DFSRLDFSGF YAFILERGDE VISAASVRIH GTDLAEMPFI GTRGMYRHQG MLRRLLNGIE
1001: SALCSLNVQK LVVSAVTEME NTWTTVFGFK PVQPSKKQRI KSLNLLIMNG TGLLEKRLLQ TQTVDGQITT KTANTVGSNK MDAKMLGEAS GSVTPVHVSS
1101: VHDAADNLEI KRHESSHPLG NSAGSTLDES PAAEENEAKK TIERTFSVSI GDGKTVKLHT LPGANCGVNM QCMAEAENIQ EEKYKETNGR SIAENTISEQ
1201: KCEDKSNSSH SNSFATPVTV DQYSCLSNEI GKGENCLSSE LSVGAAPITG KTESNLTSVH RANQEDEKAY AAPVDTKIPS AIMDENPDKH EFKTMVVGYS
1301: QISMEAKSLE DKTAIVNGTS MDAYRDKGTN EDHSASAVDN GISVKLYVQQ MEIIEDKTGS LLPDLKHSSS CEDMLVTLTE SKSLKKDMVE INDATIKVGM
1401: AGESFNEAGI TAPMLNISDA VGENVVKPTQ TCGEGQLRGE DIIYSNNSME DDLASREPVN A
Best Arabidopsis Sequence Match ( AT5G36740.5 )
(BLAST)
0001: MLETNEQKGF DLNVCASIED FSESDIKAEG ETDSLVDGNV ENVIEIKDKK KVIEREILIT RRVLRSGSVA RDLVNSDKHC KAVKRKGNVV SGGSSVDEVK
0101: EEVKQECVKS LVPEEIRGDD FRSEVKVESK DDRSDDGKEE KVQRKRGRPR KFGMSSQSDD NGLISNCKLR TSLGKKKELV GDDNVEKLVG GSCFNKEKAE
0201: VKLEHGEYAE DKEILGLDFR SQVKVEIKDD ECGIVELHDE ELQVKRKRGR PRKVQISSQS DESRPNTNCK LARTPELSSQ SSVDRISLSR LRGRPPKTKE
0301: TSVSLYIEKG PESNGRRMVR KRGRPPTPQK KRKSGMTDES DWKAKKRLKL CESPLESRHN NPLIDDERMI GEQRSKQTEA GGHSRSKSKK MLSDRILQLL
0401: LTAGWTVEYR PRNGRAYQDA VYLNPEGKTH WSVTKAYQVY KKQLESNPND QKNSTTGSGF GLLPEEDLHL LERTIQKKRS DTGKQRSKLK DRDTNDILVS
0501: TKGTGKIKRE EKHSRKRCTP SARSSLKDVD SKEDGYILFE GKRTMLGWMI DSTIVPLNGK VQCMDCKKTD ILLEGIITKE GIRCNCCDEV FSVLDFEVHA
0601: GGNRNQPFKS LYLEGGNSLL QCLHESMNKQ SESQLKGYHF VDFGSGDPND DTCGICGDGG DLICCDGCPS TFHQSCLDIK KFPSGAWYCY NCSCKFCEKD
0701: EAAKHETSTL PSLSSCRLCE EKYHQACINQ DGTVPGERST DSFCGKYCQE LFEELQLFIG VKHPLPEGFS WSFLRRFELP SEVADCDISE KIAYNAKMAV
0801: AFSVMDECFS PLVDHRSGVN LLQNIVYNFG SNFHRLDFSS FLTAVLERGD EIIAVASIRI HGNQLAEMPF IGTRYMYRRQ GMCRRLMDGI ESALGSLKVD
0901: KLVIPAVPEL IDTWTSGFGF APVNDSEKKT IKNLNLLVFP GVDMLGKSLV KEKITDSVVS SPNGLVLLAP EMTLPVDVEE NKPEESKDSA HERNCATAGV
1001: ESPSNPVDSC LKLTYVEEGD NDRESNLKLL DGSVEEKEDT KKLTDIDINS LPDEVDDSHA DQSDTKEQEI DDKEDKTPLS DDGCEGKAEG TKESNQQPDS
1101: NKVDNSQPLG NGGTGEELGN RTLALKREVT PTLRASPRLI QRSWRTSRVN QKFTGTTNAV LLDSPHRCV
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT5G36740]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.