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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 4
  • plastid 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus, plastid
BaCelLo:nucleus
ChloroP:plastid
MultiLoc:nucleus
Plant-mPloc:nucleus
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH77858 Soybean nucleus 91.91 91.28
KRH27633 Soybean cytosol, nucleus 22.52 88.59
KRH77859 Soybean nucleus 74.27 88.45
KRH27632 Soybean nucleus 62.52 88.16
Bra020653.1-P Field mustard nucleus 21.83 48.23
Solyc03g005170.2.1 Tomato nucleus 38.47 45.65
VIT_05s0020g03420.t01 Wine grape nucleus 49.69 45.46
AT4G14920.3 Thale cress nucleus 39.01 44.86
CDY10104 Canola nucleus 32.9 43.89
AT1G05380.3 Thale cress nucleus 37.25 42.88
CDY47291 Canola nucleus 34.73 42.33
GSMUA_Achr4P21300_001 Banana nucleus 26.03 41.64
Solyc09g076010.2.1 Tomato nucleus 42.29 40.62
Os03t0747600-02 Rice nucleus 22.9 39.22
KRH67232 Soybean nucleus 18.78 38.99
KRH71410 Soybean nucleus 28.86 32.03
GSMUA_Achr5P02880_001 Banana nucleus 29.54 26.33
EER95921 Sorghum nucleus 28.63 25.67
KRH52096 Soybean nucleus 11.83 25.66
OQU90997 Sorghum nucleus 26.87 25.54
TraesCS5D01G396100.1 Wheat nucleus 26.72 25.53
TraesCS2A01G235700.1 Wheat nucleus 28.93 25.28
TraesCS2B01G257600.3 Wheat nucleus 28.78 25.2
TraesCS2D01G238100.1 Wheat nucleus 28.78 25.17
HORVU5Hr1G094760.8 Barley nucleus 25.8 25.04
TraesCS5A01G386300.1 Wheat nucleus 26.03 24.87
TraesCS5B01G391200.1 Wheat nucleus 26.49 24.82
HORVU2Hr1G054040.7 Barley nucleus 26.87 24.14
KRG96074 Soybean nucleus 9.54 21.29
KRH30259 Soybean nucleus 15.11 20.91
KRH21991 Soybean nucleus 20.31 20.24
KRH32595 Soybean nucleus 11.98 20.13
Os07t0173400-01 Rice cytosol 7.56 19.72
KRH27324 Soybean nucleus 19.69 19.68
KRH72700 Soybean nucleus 15.65 18.65
KRH17051 Soybean nucleus 14.96 18.58
KRH19970 Soybean nucleus 9.39 18.47
KRH30263 Soybean nucleus 15.95 18.02
KRH26543 Soybean nucleus 13.05 17.41
KRH22815 Soybean nucleus 12.98 16.88
KRH19715 Soybean nucleus 11.22 16.54
KRH32312 Soybean nucleus 11.07 16.27
Zm00001d034422_P001 Maize cytosol 0.31 3.17
Os07t0173700-00 Rice plastid 0.31 2.7
Os07t0173501-00 Rice cytosol, extracellular 0.31 2.63
Protein Annotations
EntrezGene:100801863MapMan:15.5.30Gene3D:3.30.40.10EMBL:ACUP02006731InterPro:Acyl_CoA_acyltransferaseEnsemblPlantsGene:GLYMA_11G005500
GO:GO:0003674GO:GO:0005488GO:GO:0046872UniProt:I1LFT6InterPro:IPR013083InterPro:IPR019787
InterPro:JasEnsemblPlants:KRH27635ProteinID:KRH27635ProteinID:KRH27635.1PFAM:PF00628PFAM:PF16135
ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF10SMART:SM00249SUPFAM:SSF55729
SUPFAM:SSF57903UniParc:UPI00023CD64CInterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHDInterPro:Znf_PHD-finger
InterPro:Znf_RING/FYVE/PHDSEG:seg::::
Description
hypothetical protein
Coordinates
chr11:+:409322..417262
Molecular Weight (calculated)
145768.0 Da
IEP (calculated)
7.370
GRAVY (calculated)
-0.724
Length
1310 amino acids
Sequence
(BLAST)
0001: MESGVRSGGS GVVVKSRNSS GCLIVRKKGD VLGATASTSR KLYESKNRPN INVPLSDSGS SDESPVPPGR RLGPETIRVF NGFAAASERG GSEISRKRYR
0101: VQRIRGNGEG IAAEKGLEQW ERKRSKLVVY DFDDYNGMDV ENMRRRHLDG HGGGRFMGSV HAARIGIDRE FKTGSSGRIL DKRNNSYGDR PGGLYPGDNV
0201: DHSRYKINRD GLRVPLRLQR EKFNSDESIR VQGRNGVLKV MVNKKKVGGP SEQYYDHHKP VERRQRLKTE ETAKRLMTEE TAKRLKTEEA AKRNVNVPIR
0301: PLSYLEMKPV EKTGLLKRPE KKRIASRKSL SSKDSKGDEG DSDNSDTSLN LGIRNTEARK PAKKIISEDE QTPVHEKLPT TRTKEGKIKR GSGTEKQKLR
0401: ERIREMLLDS GWTIDYRPRR NRDYLDAVYI NPAGTAYWSI IKAYEALQKQ LNEDANEAKP KGDSSSFAPI ADEVLNQLTR KTRKKMEKEL KKKKKYDSES
0501: DNEKEPQIRS ASHKRDMNST DGDNNEEKLS SFIKQGSKSM KNKMFENTII SAPSKIQNAT NHSGDGIEKS LFGCDPQIHG RKSKKHGRCT LLVRSSNKGS
0601: NSESDGFVPY TGKRTVLAWL IDSGTVELSQ KVQYRRRKKV MLEGWITRDG IHCGCCSKIL TVSKFELHAG SKLPQPYQNI YLESGVSLLQ CQIDAWNRQE
0701: HAEKIGFHSV DIDGGDPNDD TCGICGDGGD LICCDGCPST FHQSCLDIQM LPPGEWRCMN CTCKFCGIAS GTSEKDDASV CVLHICNLCE KKYHDSCTKE
0801: MDTLPNNINS SSLSFCGKEC KELSEHLKKY LGTKHELESG FSWSLIHRTD DDSEAACRGI SQRVECNSKL AITLTVMDEC FLPVIDRRSG INLIRNVLYN
0901: SGSNFSRLSY SGFYTAILER GDEIIAAASI RFHGTQIAEM PFIGTRHIYR RQGMCRRLFS AIESTLCSLK VEKLVIPAIA EVTNTWTTVF GFTHLDKSLR
1001: QEMKSLNMMV FPGIDMLQKL LVEQGNHEGS EKMENEDDDF IKTKMESRSD VGSSTPQDPH GSDDVSSSPA NETNNECSDA SQELNNQVLV DGIICSKSHS
1101: EEMMSDPVSD KCISPSRTSL SELEMKNKVA AAPPVDRLDS STKCQSISPV DTSVSCHPVD ILKVQTLVQE NTCCDPCPAE ENLDKKCHSS TAMNFDSLEL
1201: DINPVLDSEM ADNTLPTKEV FMNDAVEVVP SGNISEENIT KGNNRNVDES SSALNHADES LLQVGSVSNG EIGCENEKDL HLNPGVTSNE MYFDESGINA
1301: SGDSSENVLV
Best Arabidopsis Sequence Match ( AT4G14920.3 )
(BLAST)
0001: MDRGGRRSGE SPGVLIKKRS SSGCLIVKKN DGVGRICSFS ESRPNWESNK RSRMITSDSE SSDRFTIPRN MRQYRNVEES RFGWKRDCVE GKGDDCFVGN
0101: SREWKESKRH RLDDDDDNDD DEESEDELMA MRMRRSFDGS GVDIGKKAYL GSAHFANDRE YGTGSSRKGL DIEKRRKPYL DGSGNIGFGN QGYRNRCKVS
0201: GNEAKTTHAL LLQKKYKRDM NFDEPIRVQG KNGVLKVMVN KQNKIGGLLQ NAKAEQTQCG STIQETGKIR VAIQLPNTLK TEKLPKLPPP ARIQSNGLKL
0301: PMSLTMKSKG QNQDSEDSDS SGRLQKRIIQ PHKPSQMSST GGEKTLPEAS MPSKIRDGKI RRGSGTEKQR LRERIREMLL EAGWTIDYRP RRNRDYLDAV
0401: YISPRGTAYW SIIKAYEALL KQLNSGEKVA KPCDDSSTFS LISDEILSQL TRKTKSKIEK DMKRELHSAS DSDGKATFAR NFLAIKNEVG NDDRYVHKQQ
0501: RNVMSVKNEV NSRDSSQGTT SKSESPLHHQ TEKSTGSSSH RVDGGKSSKH GRSTLLVRRS VRGDNSESDG FVPSSEKRTV LAWLIDSGTL QLSEKVMYMN
0601: QRRTRAMLEG WITRDGIHCG CCSKILAVSK FEIHAGSKLR QPFQNIFLNS GVSLLQCQID AWDKQKGAGN IGFCSVDVIA DDPNDDACGI CGDGGDLVCC
0701: DGCPSTFHQR CLDIRMFPLG DWHCPNCTCK FCKAVIEDVT QTVGANTCKM CEKKYHKSCM PKANVTPADT TEPITSFCGK KCKALSEGVK KYVGVKHELE
0801: AGFSWSLVHR ECTNSDLSLS GHPHIVENNS KLALALTVMD ECFLPIIDRR SGVNIVQNVL YNCGSNFNRL NFGGFYTALL ERGDEIVASA SIRFHGNRLA
0901: EMPFIGTRHV YRHQGMCRRL FSVVESALQH LKVKLLIIPA TADFSHVWIS KFGFRQVEDS LKKEMRSMNL LTFPGIDVLQ KELLAPRHTE SAVDTEDCDP
1001: CNEGTNSAIK TNEVSVLETT SPSRDKPVSD YLVEHQPYED VSSASRDSLV HDGYPKMLET AFKTSTMARS SDMEKHMDCK TSYSRFDGED EEDSLIESPP
1101: QRNSDMAFLD HIIRSPVDTG ATENRDVYGS GDDDSPETQ
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein [Source:TAIR;Acc:AT4G14920]
SUBAcon: [nucleus]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.