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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • nucleus 6
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, nucleus
BaCelLo:nucleus
EpiLoc:nucleus
MultiLoc:nucleus
Plant-mPloc:nucleus
PProwler:mitochondrion
WoLF PSORT:nucleus
YLoc:nucleus
nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH22815 Soybean nucleus 90.53 88.28
KRG96074 Soybean nucleus 30.45 50.94
CDX71404 Canola extracellular, golgi, vacuole 25.97 49.71
VIT_06s0061g00840.t01 Wine grape nucleus 40.02 47.69
GSMUA_AchrUn_... Banana nucleus 39.21 47.24
Zm00001d045631_P002 Maize cytosol 13.24 46.76
HORVU7Hr1G122600.9 Barley cytosol, nucleus 33.1 43.45
KRH32595 Soybean nucleus 34.22 43.08
GSMUA_Achr4P12040_001 Banana nucleus 37.88 42.51
KXG20990 Sorghum nucleus 38.19 42.18
KRH19970 Soybean nucleus 28.31 41.74
CDY04521 Canola nucleus 39.41 40.44
CDX77146 Canola nucleus 37.07 39.48
Bra011988.1-P Field mustard nucleus 40.02 39.18
PGSC0003DMT400001219 Potato nucleus 41.85 38.81
CDY30516 Canola nucleus 41.24 38.61
AT2G27980.1 Thale cress cytosol, plastid 42.06 38.53
Zm00001d014909_P003 Maize nucleus 36.56 38.52
TraesCS7A01G569600.1 Wheat nucleus, plastid 36.86 38.51
Solyc11g066480.1.1 Tomato nucleus 40.94 37.78
Bra034381.1-P Field mustard nucleus 40.94 37.57
TraesCS7B01G489100.1 Wheat nucleus, plastid 37.17 34.93
KXG19082 Sorghum nucleus 32.38 34.87
Zm00001d035862_P003 Maize nucleus 34.22 34.08
KRH19715 Soybean nucleus 30.75 33.97
KRH32312 Soybean nucleus 30.75 33.89
TraesCS7D01G543000.1 Wheat nucleus 37.47 33.21
Os06t0101000-01 Rice nucleus, plastid 34.42 32.98
TraesCS7A01G002000.1 Wheat nucleus 32.79 32.72
TraesCS4A01G498600.2 Wheat nucleus, plastid 34.83 29.56
Zm00001d045629_P002 Maize plastid 20.37 26.28
KRH52096 Soybean nucleus 13.44 21.85
KRH67232 Soybean nucleus 12.73 19.81
KRH30259 Soybean nucleus 14.97 15.52
KRH72700 Soybean nucleus 16.8 15.01
KRH17051 Soybean nucleus 15.99 14.88
KRH77859 Soybean nucleus 16.09 14.36
KRH27632 Soybean nucleus 13.44 14.21
KRH30263 Soybean nucleus 16.09 13.62
KRH27635 Soybean nucleus 17.41 13.05
KRH77858 Soybean nucleus 17.21 12.81
KRH71410 Soybean nucleus 15.07 12.54
KRH27324 Soybean nucleus 15.48 11.59
KRH27633 Soybean cytosol, nucleus 3.87 11.41
KRH21991 Soybean nucleus 15.07 11.26
Protein Annotations
EntrezGene:100803825MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30EMBL:ACUP02007718InterPro:Acyl_CoA_acyltransferase
ncoils:CoilEnsemblPlantsGene:GLYMA_12G179200GO:GO:0003674GO:GO:0005488GO:GO:0046872InterPro:IPR013083
InterPro:IPR019787InterPro:JasUniProt:K7LVM3EnsemblPlants:KRH26543ProteinID:KRH26543ProteinID:KRH26543.1
PFAM:PF16135ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF12SMART:SM00249
SUPFAM:SSF55729SUPFAM:SSF57903UniParc:UPI000296679CInterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHDInterPro:Znf_PHD
InterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHD::::
Description
hypothetical protein
Coordinates
chr12:-:33903699..33910581
Molecular Weight (calculated)
108284.0 Da
IEP (calculated)
5.850
GRAVY (calculated)
-0.377
Length
982 amino acids
Sequence
(BLAST)
001: MAKGADSDEF VVLSRVRTGL KREFAFAMKA QSEICGGSLG RTRASKNRVE APVQPPSARK RSRKSEEAKT LEDAMSEEEV KSDVVDLQSD DEPKNNNHVG
101: ESESAAMQVC EEEPKSDVVL ETLISEEQPK MLEPESVISE EEPKVLDDVI NEEEAIVAET LKEQEPIVPE TLKEEVVDEM AEQPLCIEES EEKDSNGVAL
201: ALVNDGAKGK KSMKKRLERP QSERRFTRSA LKVKSEETND GEHVGVAGIS DGVKRETEAG ASLVMTTPSS VKFSNRGKLK KFPAKLRDLL ATGILEGLPV
301: MYMKGVKAGW KDGEKGLQGV IQDSGVLCFC KICKGVEVVT PTVFELHAGS ANKRPPEYIY IHDGNSGKTL RDVMNACCCC DFPLESMDEA VQKLLGDFTM
401: KKSSICLNCR GACKGVSRLV CDSCLVSPAQ TAVASNKGIS QPVQPRSPEP VVIQKSLDNE VQPNSLHNEV QPNKLDTGMQ PNSLDNGMEP DSLNNSMKPK
501: SFSNGMKHSA SRGKSQGRLT RKDLRLHKLV FEADVLPDGT ELAYYAHGQK LLVGYKKGYG IFCTCCNEQV SASQFEAHAG WASRRKPYLH IYTSNGISLH
601: ELSISLSKDH RRFSNNDNDD LCIICEDGGD LLCCDGCPRA FHIDCVPLPC IPSGTWYCKY CQNVFQKDRH GQHEVNALAA AGRIAGPDIL ELMNKRCIRV
701: VRTLEVDHGG CALCSRPNFS KSFGPQTVII CDQCEKEYHV GCLKDHNMEN LEELPVGNWF CSGNCSQIHT ALMDLVASKE KDVPDPLLNL IKKKHEEKSL
801: DIGAGLDVKW RVINWKLDSD SVETRKLLSK AVAIFHERFD PIVDSTSGRD FIPAMLFGRN IRGQDFSGIY CAVLTVNGDI VSAGVFRVFG LEIAELPLVA
901: TTADHQGQGY FQCLFSCIET LLGSLNVKNL VLPAADEAES IWTGKFGFTK LPQDEINKYK KFYRMMIFQG TSVLQKPVAE AL
Best Arabidopsis Sequence Match ( AT2G27980.1 )
(BLAST)
0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
SUBAcon: [plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.