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Thale cress
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Thale cress
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid, cytosol

Predictor Summary:
  • nucleus 2
  • mitochondrion 2
  • cytosol 2
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plastid
Any Predictor:cytosol, mitochondrion, nucleus, plastid
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:cytosol
Predotar:plastid
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:nucleus
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX71404 Canola extracellular, golgi, vacuole 36.01 75.24
CDY04521 Canola nucleus 65.58 73.46
CDX77146 Canola nucleus 63.06 73.32
Bra011988.1-P Field mustard nucleus 66.79 71.39
CDY30516 Canola nucleus 68.84 70.35
Bra034381.1-P Field mustard nucleus 69.31 69.44
Zm00001d045631_P002 Maize cytosol 12.69 48.92
VIT_06s0061g00840.t01 Wine grape nucleus 36.29 47.21
GSMUA_AchrUn_... Banana nucleus 34.51 45.4
HORVU7Hr1G122600.9 Barley cytosol, nucleus 29.76 42.65
KRH26543 Soybean nucleus 38.53 42.06
GSMUA_Achr4P12040_001 Banana nucleus 33.77 41.37
KRH22815 Soybean nucleus 38.71 41.21
KXG20990 Sorghum nucleus 33.49 40.38
TraesCS7A01G569600.1 Wheat nucleus, plastid 33.3 37.98
Zm00001d014909_P003 Maize nucleus 32.46 37.34
PGSC0003DMT400001219 Potato nucleus 36.85 37.3
Solyc11g066480.1.1 Tomato nucleus 35.45 35.71
KXG19082 Sorghum nucleus 30.13 35.42
TraesCS7B01G489100.1 Wheat nucleus, plastid 33.96 34.83
Zm00001d035862_P003 Maize nucleus 32.0 34.79
Os06t0101000-01 Rice nucleus, plastid 31.72 33.17
TraesCS7D01G543000.1 Wheat nucleus 33.96 32.85
AT2G37520.1 Thale cress nucleus 25.19 32.57
AT3G53680.2 Thale cress nucleus 25.19 32.03
TraesCS7A01G002000.1 Wheat nucleus 29.29 31.91
AT2G36720.1 Thale cress cytosol 29.57 31.48
TraesCS4A01G498600.2 Wheat nucleus, plastid 31.25 28.95
Zm00001d045629_P002 Maize plastid 18.84 26.54
AT5G63900.1 Thale cress nucleus 10.17 19.57
AT1G05380.3 Thale cress nucleus 14.93 14.06
AT4G14920.3 Thale cress nucleus 14.46 13.61
AT5G58610.3 Thale cress nucleus 13.81 13.52
AT3G14980.2 Thale cress nucleus 14.55 13.12
AT5G36740.1 Thale cress nucleus 13.15 12.06
AT5G36670.1 Thale cress nucleus 12.31 11.06
Protein Annotations
MapMan:15.5.30Gene3D:3.30.40.10Gene3D:3.40.630.30EntrezGene:817342ProteinID:AEC08066.1ArrayExpress:AT2G27980
EnsemblPlantsGene:AT2G27980RefSeq:AT2G27980TAIR:AT2G27980RefSeq:AT2G27980-TAIR-GEnsemblPlants:AT2G27980.1TAIR:AT2G27980.1
InterPro:Acyl_CoA_acyltransferaseUniProt:F4IHN9GO:GO:0003674GO:GO:0003824GO:GO:0005488GO:GO:0008150
GO:GO:0016740GO:GO:0016746GO:GO:0046872InterPro:IPR013083InterPro:IPR019787InterPro:Jas
RefSeq:NP_180365.6PFAM:PF16135PO:PO:0000013PO:PO:0000037PO:PO:0000084PO:PO:0000230
PO:PO:0000293PO:PO:0001054PO:PO:0001078PO:PO:0001081PO:PO:0001185PO:PO:0004507
PO:PO:0007064PO:PO:0007095PO:PO:0007098PO:PO:0007103PO:PO:0007115PO:PO:0007123
PO:PO:0007611PO:PO:0007616PO:PO:0008019PO:PO:0009005PO:PO:0009006PO:PO:0009009
PO:PO:0009010PO:PO:0009025PO:PO:0009029PO:PO:0009030PO:PO:0009031PO:PO:0009032
PO:PO:0009046PO:PO:0009047PO:PO:0009052PO:PO:0020038PO:PO:0020100PO:PO:0020137
PO:PO:0025022PO:PO:0025281ScanProsite:PS01359PFscan:PS50016PANTHER:PTHR42672PANTHER:PTHR42672:SF12
SMART:SM00249SUPFAM:SSF55729SUPFAM:SSF57903UniParc:UPI0001E92C73InterPro:Zinc_finger_PHD-type_CSInterPro:Znf_FYVE_PHD
InterPro:Znf_PHDInterPro:Znf_PHD-fingerInterPro:Znf_RING/FYVE/PHDSEG:seg::
Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
Coordinates
chr2:-:11913359..11920001
Molecular Weight (calculated)
118073.0 Da
IEP (calculated)
6.432
GRAVY (calculated)
-0.327
Length
1072 amino acids
Sequence
(BLAST)
0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.