Factsheet for Bra034381.1-P

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY30516	Canola	nucleus	94.11	96.0
CDX77146	Canola	nucleus	81.22	94.25
Bra011988.1-P	Field mustard	nucleus	69.81	74.48
AT2G27980.1	Thale cress	cytosol, plastid	69.44	69.31
Zm00001d045631_P002	Maize	cytosol	12.34	47.48
VIT_06s0061g00840.t01	Wine grape	nucleus	35.05	45.51
GSMUA_AchrUn_...	Banana	nucleus	33.64	44.17
HORVU7Hr1G122600.9	Barley	cytosol, nucleus	30.0	42.91
GSMUA_Achr4P12040_001	Banana	nucleus	33.64	41.14
KRH26543	Soybean	nucleus	37.57	40.94
KRH22815	Soybean	nucleus	37.76	40.12
KXG20990	Sorghum	nucleus	33.18	39.93
TraesCS7A01G569600.1	Wheat	nucleus, plastid	32.52	37.02
Zm00001d014909_P003	Maize	nucleus	31.96	36.7
PGSC0003DMT400001219	Potato	nucleus	36.17	36.54
Solyc11g066480.1.1	Tomato	nucleus	35.14	35.34
KXG19082	Sorghum	nucleus	29.25	34.32
TraesCS7B01G489100.1	Wheat	nucleus, plastid	33.27	34.07
Bra017181.1-P	Field mustard	nucleus	25.33	33.79
Zm00001d035862_P003	Maize	nucleus	30.65	33.27
TraesCS7D01G543000.1	Wheat	nucleus	33.46	32.31
Os06t0101000-01	Rice	nucleus, plastid	30.56	31.9
TraesCS7A01G002000.1	Wheat	nucleus	29.25	31.81
Bra017226.1-P	Field mustard	nucleus	29.16	29.94
TraesCS4A01G498600.2	Wheat	nucleus, plastid	31.12	28.78
Zm00001d045629_P002	Maize	plastid	18.13	25.49
Bra010170.1-P	Field mustard	cytosol, mitochondrion, nucleus	5.89	22.11
Bra002633.1-P	Field mustard	plastid	8.5	21.56
Bra024246.1-P	Field mustard	nucleus	9.07	20.59
Bra037758.1-P	Field mustard	nucleus	10.37	19.27
Bra020653.1-P	Field mustard	nucleus	10.47	18.89
Bra027290.1-P	Field mustard	nucleus	14.21	13.64
Bra035350.1-P	Field mustard	nucleus	11.59	11.8
Bra002634.1-P	Field mustard	endoplasmic reticulum, vacuole	0.0	0.0

Protein Annotations

MapMan:15.5.30	Gene3D:3.30.40.10	Gene3D:3.40.630.30	InterPro:Acyl_CoA_acyltransferase	EnsemblPlantsGene:Bra034381	EnsemblPlants:Bra034381.1
EnsemblPlants:Bra034381.1-P	ncoils:Coil	GO:GO:0003674	GO:GO:0005488	GO:GO:0046872	InterPro:IPR013083
InterPro:IPR019787	InterPro:Jas	UniProt:M4EZY8	PFAM:PF16135	ScanProsite:PS01359	PFscan:PS50016
PANTHER:PTHR42672	PANTHER:PTHR42672:SF12	SMART:SM00249	SUPFAM:SSF55729	SUPFAM:SSF57903	UniParc:UPI0002543C50
InterPro:Zinc_finger_PHD-type_CS	InterPro:Znf_FYVE_PHD	InterPro:Znf_PHD	InterPro:Znf_PHD-finger	InterPro:Znf_RING/FYVE/PHD	SEG:seg

Description

AT2G27980 (E=0.0) | protein binding / zinc ion binding

Coordinates

chrA04:-:12229139..12234935

Molecular Weight (calculated)

117785.0 Da

IEP (calculated)

5.439

GRAVY (calculated)

-0.562

Length

1070 amino acids

Sequence
(BLAST)

0001: MAKGTSTGET MVRTGCKREL QFMLKSRSEI CGGESLGRTR GSNTAAKRPP PTRCLRSASL KKIRLAKEDV DDAVVSGSAE EEEEEEKSDV VDDYGDDDEG
0101: KGVVFSEKKI ESNGCGDVAM SEEEEEKVEK GVTEVGEAEK ECSSVVRREI VMACPSGFSE FAKLTSRSCQ VKLESGLGYG KPGRRLTRSM LKSEANADDE
0201: ANDEGSKLGA DGGEDHINEE AKVEGSKSEA NGDKDHVNQE REAKDSCVAD GGKSELNGEE DHIDQEREGK DSEDNCVDAS TLVGCGKEEE LPEKKSVQPC
0301: HVDKNAMSDV VDDNPLRRLT RSLGKQTSDL DDPDLENVEP SDLGKVAVHA NDVGMDDFQS PPVTTPNKRG RPKKFIRDFP KKLKDLLDSG ILEGLTVYYV
0401: RGAKMREAGT RGLKGVIIGS GIMCFCGDCK GTQVVSPAVF EQHASSTNKR PPEYILLESG CTLRDVMNAF KETSYDTLEE RLRLLVGPDF KKSSVCFGCQ
0501: GPMVEPCETK SLFACKSCLE RKEPEPHTSP SKANPLNGFS SPDVAKKTIP RRPISTPRQS NRREQPTKKS PEPGVLSRTT PSESKSSSIK SNSQGKLTRK
0601: DVRLHKLVFE DDILPDGTEV GYFLAGKKML VGYKKGFGIL CSCCDKVVSP STFEAHAGCG SRRKPFHQIY TTNGVSLHEL SVALTMDQKF SIGENDDLCS
0701: ICKDGGELLC CDTCPRSYHI VCAYLPSLPS ERWSCKYCVN MMKREKCVES NPNAVAAGRV RGVDAIAQIT TRCIRIVSSL TSELPSVCVL CRGHSFCRLG
0801: FNARTVIICD QCEKEFHVGC LKEHNIADLK ELPEDKWFCS LGCENINTSL DSLVVRGEEK LSYNSLRKRQ NPNEESCPED NTTPDIRWRV LSGRLTSSDD
0901: TDTKALLGKA LSILHERFDP ISESGSRGDL IPAMLYGRKS KGQDFSGMYC TMLTVDGVIV SVGIFRVFGS ELAELPLVAT SRDCQGQGYF QCLFDCIERL
1001: LGSLNVKHLV LPAADEAKSI WTDKFGFTKM TEEEMKEYRR DFSVMVFHGT SMLRKTVPAF SKPEEDSMEQ

Best Arabidopsis Sequence Match ( AT2G27980.1 )
(BLAST)

0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE

Arabidopsis Description

Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.