Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
nucleus:
28394025
|
msms PMID:
28394025
doi
Cell and Molecular Sciences, JHI, Invergowrie, Dundee, DD2 5DA, UK., Division of Plant Science, School of Life Sciences, University of Dundee at the James Hutton Institute (JHI), Invergowrie, Dundee, DD2 5DA, UK., Dundee Effector Consortium, JHI, Invergowrie, Dundee, DD2 5DA, UK., Section of Population Genetics, Technische Universität München, 85354, Freising, Germany., Wellcome Trust Centre for Gene Regulation and Expression, School of Life Sciences, University of Dundee, Dow Street, Dundee, DD1 5EH, UK.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400001219 | Potato | nucleus | 91.82 | 92.26 |
| CDX71404 | Canola | extracellular, golgi, vacuole | 23.97 | 49.71 |
| Zm00001d045631_P002 | Maize | cytosol | 12.88 | 49.28 |
| VIT_06s0061g00840.t01 | Wine grape | nucleus | 37.31 | 48.18 |
| GSMUA_AchrUn_... | Banana | nucleus | 35.43 | 46.26 |
| GSMUA_Achr4P12040_001 | Banana | nucleus | 34.77 | 42.29 |
| HORVU7Hr1G122600.9 | Barley | cytosol, nucleus | 29.32 | 41.71 |
| Solyc10g083800.1.1 | Tomato | nucleus | 35.24 | 41.39 |
| KRH26543 | Soybean | nucleus | 37.78 | 40.94 |
| KXG20990 | Sorghum | nucleus | 33.55 | 40.16 |
| KRH22815 | Soybean | nucleus | 37.31 | 39.42 |
| CDX77146 | Canola | nucleus | 33.83 | 39.05 |
| Solyc09g008520.2.1 | Tomato | nucleus | 33.83 | 38.71 |
| Zm00001d014909_P003 | Maize | nucleus | 32.42 | 37.02 |
| TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 32.42 | 36.7 |
| KXG19082 | Sorghum | nucleus | 30.83 | 35.96 |
| CDY30516 | Canola | nucleus | 35.34 | 35.84 |
| CDY04521 | Canola | nucleus | 32.24 | 35.84 |
| Bra011988.1-P | Field mustard | nucleus | 33.74 | 35.79 |
| AT2G27980.1 | Thale cress | cytosol, plastid | 35.71 | 35.45 |
| Bra034381.1-P | Field mustard | nucleus | 35.34 | 35.14 |
| Zm00001d035862_P003 | Maize | nucleus | 32.33 | 34.89 |
| TraesCS7A01G002000.1 | Wheat | nucleus | 31.58 | 34.15 |
| Os06t0101000-01 | Rice | nucleus, plastid | 32.8 | 34.05 |
| TraesCS7B01G489100.1 | Wheat | nucleus, plastid | 32.52 | 33.11 |
| TraesCS7D01G543000.1 | Wheat | nucleus | 32.89 | 31.59 |
| TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 33.18 | 30.51 |
| Zm00001d045629_P002 | Maize | plastid | 18.98 | 26.54 |
| Solyc10g084650.1.1 | Tomato | nucleus | 28.76 | 22.68 |
| Solyc08g078120.1.1 | Tomato | nucleus | 7.14 | 18.63 |
| Solyc06g082050.1.1 | Tomato | nucleus | 5.64 | 17.65 |
| Solyc03g071550.1.1 | Tomato | nucleus | 13.82 | 15.26 |
| Solyc03g005170.2.1 | Tomato | nucleus | 14.19 | 13.68 |
| Solyc07g062600.2.1 | Tomato | nucleus | 14.0 | 13.06 |
| Solyc09g031580.2.1 | Tomato | nucleus | 14.66 | 12.86 |
| Solyc09g076010.2.1 | Tomato | nucleus | 14.38 | 11.22 |
| Solyc09g065340.2.1 | Tomato | nucleus | 14.0 | 10.96 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | UniProt:K4D9Q5 | PFAM:PF16135 |
| ScanProsite:PS01359 | PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF12 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | EnsemblPlantsGene:Solyc11g066480.1 | EnsemblPlants:Solyc11g066480.1.1 | UniParc:UPI0002769FA3 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
No Description!
Coordinates
chr11:-:52218151..52227030
Molecular Weight (calculated)
116913.0 Da
IEP (calculated)
4.782
GRAVY (calculated)
-0.464
Length
1064 amino acids
Sequence
(BLAST)
(BLAST)
0001: MKREFAMMMK AQADWDIDVG QKRVTRTPQS SQNSPGNVSN DKVYVKKRKR EVKDVVDSED LSNLKVVGKE LESDGVVKKD DNVALLSEDL SNSKVVGEEL
0101: ESDGVQKMDQ NVVLLSGDLS NSKVVEELES DRVVKKDDNV VLLSEDLSNS KVVGEEQERD GIVTRDENVI ILSEEEEPKS GVVDCTSDDE KKAKMDEGVV
0201: GSGEEGNASL QNCGNDATTE KGESAKTNDD FDEEMAEIVP ELAVTAQGDG KDEQKRGDDT QNEMPTTGKA SDFIVGAMPE IVPEAAVTAQ ADGKNVQTCR
0301: GDAMTEMAKT VKANDCTVEA RPEIAPELAV TAQGDANAKI EMAKTVKAND CTVEARPEIA PELAVTAQGD ANDEQLQTPM RRFTRSALKT EEDTMVSQCD
0401: RIKIVDVHET DSVGTMSTPA RLELKMSKKV ALTKIPTKLR DLLETGLLEG LSVRYIRGTT KGRGRPAKGL RGEIRGSGIL CFCDNCHGTS VVTPNQFELH
0501: ANSANKRPPE YIYLENGKSL RDVLSMCKDA SSDEVEMVIK NAIGSADAKI DASACMSAQE FQSPPVPSGE ASSRSTSSAP ATKLTDRMPS GSGTQSKAHG
0601: KLTRKDLRMH KLVFEEDALP DGTALAYYVR GQKLLEGYKK GHGIFCYCCN TEVSPSQFEA HAGCASRRKP YLYIYTSNGV SLHELSIKLS KERRSSAEEN
0701: DDLCSICADG GDLLCCDNCP RAFHTECVCL PSIPTGTWYC KYCENMFAKE RFVENNANAK AAGRVAGVDA IEQITRRCIR MVETLETEVS VCVLCRDQDF
0801: SKSGFGPRTV IICDQCEKEY HVGCLKEHNI DDLQELPKDK WFCCTDCSRI HFALEKVVSD GEQNIPESLL EVLKAKNEGK GSVNNSRLDI KWRLLSGKMS
0901: SEETRVWLSS AVSIFHEQFD PIADASTSRL DLIPHMVYGR SFKDQDYGGM FCAILLVNSL VVSAGIFRVF GKEVAELPLV ATSTNCQGQG YFQSLFSCVE
1001: NLLRSLKVEN LVLPSAEEAE AIWTNRFSFT KIPEEQMKQY RKNYQMMVFS GTSMLQKQVG GLST
0101: ESDGVQKMDQ NVVLLSGDLS NSKVVEELES DRVVKKDDNV VLLSEDLSNS KVVGEEQERD GIVTRDENVI ILSEEEEPKS GVVDCTSDDE KKAKMDEGVV
0201: GSGEEGNASL QNCGNDATTE KGESAKTNDD FDEEMAEIVP ELAVTAQGDG KDEQKRGDDT QNEMPTTGKA SDFIVGAMPE IVPEAAVTAQ ADGKNVQTCR
0301: GDAMTEMAKT VKANDCTVEA RPEIAPELAV TAQGDANAKI EMAKTVKAND CTVEARPEIA PELAVTAQGD ANDEQLQTPM RRFTRSALKT EEDTMVSQCD
0401: RIKIVDVHET DSVGTMSTPA RLELKMSKKV ALTKIPTKLR DLLETGLLEG LSVRYIRGTT KGRGRPAKGL RGEIRGSGIL CFCDNCHGTS VVTPNQFELH
0501: ANSANKRPPE YIYLENGKSL RDVLSMCKDA SSDEVEMVIK NAIGSADAKI DASACMSAQE FQSPPVPSGE ASSRSTSSAP ATKLTDRMPS GSGTQSKAHG
0601: KLTRKDLRMH KLVFEEDALP DGTALAYYVR GQKLLEGYKK GHGIFCYCCN TEVSPSQFEA HAGCASRRKP YLYIYTSNGV SLHELSIKLS KERRSSAEEN
0701: DDLCSICADG GDLLCCDNCP RAFHTECVCL PSIPTGTWYC KYCENMFAKE RFVENNANAK AAGRVAGVDA IEQITRRCIR MVETLETEVS VCVLCRDQDF
0801: SKSGFGPRTV IICDQCEKEY HVGCLKEHNI DDLQELPKDK WFCCTDCSRI HFALEKVVSD GEQNIPESLL EVLKAKNEGK GSVNNSRLDI KWRLLSGKMS
0901: SEETRVWLSS AVSIFHEQFD PIADASTSRL DLIPHMVYGR SFKDQDYGGM FCAILLVNSL VVSAGIFRVF GKEVAELPLV ATSTNCQGQG YFQSLFSCVE
1001: NLLRSLKVEN LVLPSAEEAE AIWTNRFSFT KIPEEQMKQY RKNYQMMVFS GTSMLQKQVG GLST
0001: MAKGTATGEF VAVSQVRTGC KRELQFVLKS QSEICGGESL GRTRGSRNLN GESRSVEVKK SIRASGLKSG IKKMRFSKDE EVGEVVMSDT VGVGLEEEEV
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
0101: KSDVIDVDSA LVESMSEDKG LEEKNDVEIE NGDDNVVMNE DHLLEQTEKV SEKVIEAEKV CSIGGDSVID REIVVACPAG LSVMEKMASR SCKVKLERGL
0201: VYAKPCKRLT RSMLKVEGIK SEVNADDDHV NPEKDAIGSE DNCVDVSGSV AYVVEEELLE QNNVEICLGL PSRSSQMNGH SLCLGLPSRS FQMSGHSQGV
0301: DKKAVNDTVD KPLRRFTRSL VKQESDSDNP NLGNTTEPAD LVDVDMHAND VEMDGFQSPS VTTPNKRGRP KKFLRNFPAK LKDIFDCGIL EGLIVYYVRG
0401: AKVREAGTRG LKGVIKGSGV LCFCSACIGI QVVSPAMFEL HASSNNKRPP EYILLESGFT LRDVMNACKE NPLATLEEKL RVVVGPILKK SSLCLSCQGP
0501: MIEPCDTKSL VVCKSCLESK EPEFHNSPSK ANDALNGSSR PSVDPKSILR RSKSSPRQSN RREQPTRKST EPGVVPGTIL SESKNSSIKS NSHGKLTRKD
0601: LRLHKLVFED DILPDGTEVG YFVAGEKMLV GYKKGFGIHC SCCNKVVSPS TFEAHAGCAS RRKPFQHIYT TNGVSLHELS VALSMDQRFS IHENDDLCSI
0701: CRDGGELVCC DTCPRSYHKV CASLPSLPSE RWSCKYCVNM VEREKFVDSN LNAIAAGRVQ GVDAIAEITN RCIRIVSSFV TELPSVCVLC RGHSFCRLGF
0801: NARTVIICDQ CEKEFHVGCL KERDIADLKE LPEEKWFCSL GCEEINTTLG NLIVRGEEKL SNNILNFLRK KEQPNEENCP DYKTTPDIRW RVLSGKLTSS
0901: DDTKILLAKA LSILHERFDP ISESGTKGDL IPAMVYGRQT KAQDFSGMYC TMLAVDEVIV SVGIFRVFGS ELAELPLVAT SKDCQGQGYF QCLFACIERL
1001: LGFLNVKHIV LPAADEAKSI WTDKFGFTKM TDEEVKEYRK DYSVMIFHGT SMLRKSVPAP SAVSKTEASK EE
Arabidopsis Description
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [Source:UniProtKB/TrEMBL;Acc:F4IHN9]
SUBAcon: [plastid,cytosol]
SUBAcon: [plastid,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.