Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY52116 | Canola | nucleus | 66.85 | 51.22 |
| CDX80351 | Canola | golgi, plasma membrane | 36.53 | 39.84 |
| Zm00001d008232_P001 | Maize | cytosol | 10.87 | 37.19 |
| KXG31496 | Sorghum | cytosol, extracellular | 3.29 | 34.29 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 5.57 | 33.7 |
| KRH52096 | Soybean | nucleus | 17.81 | 32.28 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 30.14 | 31.13 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 17.63 | 29.88 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 17.53 | 29.81 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 17.44 | 29.16 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.47 | 27.86 |
| Zm00001d022583_P001 | Maize | nucleus | 16.99 | 26.57 |
| AT5G63900.1 | Thale cress | nucleus | 13.52 | 26.57 |
| Zm00001d028749_P002 | Maize | mitochondrion | 29.86 | 25.69 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 30.59 | 24.67 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 30.32 | 24.47 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 30.14 | 24.32 |
| AT1G05380.3 | Thale cress | nucleus | 17.63 | 16.96 |
| AT4G14920.3 | Thale cress | nucleus | 17.17 | 16.51 |
| AT2G37520.1 | Thale cress | nucleus | 12.05 | 15.92 |
| AT5G36740.1 | Thale cress | nucleus | 16.62 | 15.57 |
| AT3G53680.2 | Thale cress | nucleus | 11.78 | 15.3 |
| AT5G36670.1 | Thale cress | nucleus | 15.98 | 14.67 |
| AT3G14980.2 | Thale cress | nucleus | 15.07 | 13.88 |
| AT2G27980.1 | Thale cress | cytosol, plastid | 13.52 | 13.81 |
| AT2G36720.1 | Thale cress | cytosol | 11.96 | 13.01 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | EntrezGene:835975 | ProteinID:ANM68349.1 | ProteinID:ANM68353.1 |
| ProteinID:ANM68358.1 | ArrayExpress:AT5G58610 | EnsemblPlantsGene:AT5G58610 | RefSeq:AT5G58610 | TAIR:AT5G58610 | RefSeq:AT5G58610-TAIR-G |
| EnsemblPlants:AT5G58610.3 | InterPro:Acyl_CoA_acyltransferase | InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant | Unigene:At.55614 | ProteinID:BAA97331.1 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas |
| RefSeq:NP_001330111.1 | RefSeq:NP_001330115.1 | RefSeq:NP_001330120.1 | PFAM:PF00628 | PFAM:PF05641 | PFAM:PF16135 |
| PFscan:PS50016 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | UniProt:Q9LUZ5 | SMART:SM00249 | SMART:SM00743 |
| SUPFAM:SSF55729 | SUPFAM:SSF57903 | UniParc:UPI00000A8EFA | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger |
| InterPro:Znf_RING/FYVE/PHD | : | : | : | : | : |
Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
Coordinates
chr5:-:23686079..23691394
Molecular Weight (calculated)
125104.0 Da
IEP (calculated)
8.494
GRAVY (calculated)
-0.449
Length
1095 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.