Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4D01G195300.1 | Wheat | nucleus | 97.72 | 97.72 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 96.02 | 95.95 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 11.57 | 86.74 |
| Zm00001d028749_P002 | Maize | mitochondrion | 55.71 | 59.39 |
| KXG39596 | Sorghum | plasma membrane | 54.83 | 59.14 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 20.27 | 41.98 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 29.33 | 37.55 |
| CDX73252 | Canola | cytosol | 5.16 | 36.27 |
| KRH30259 | Soybean | nucleus | 24.39 | 34.95 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 17.83 | 34.23 |
| KRH30263 | Soybean | nucleus | 27.05 | 31.64 |
| KRH52096 | Soybean | nucleus | 14.0 | 31.46 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 26.9 | 30.67 |
| KRH72700 | Soybean | nucleus | 24.83 | 30.66 |
| KRH17051 | Soybean | nucleus | 23.58 | 30.33 |
| AT5G58610.3 | Thale cress | nucleus | 24.47 | 30.32 |
| Bra010170.1-P | Field mustard | cytosol, mitochondrion, nucleus | 6.34 | 30.18 |
| CDY26900 | Canola | cytosol, mitochondrion, nucleus | 6.34 | 30.18 |
| CDX84460 | Canola | nucleus | 10.1 | 29.85 |
| PGSC0003DMT400056776 | Potato | nucleus | 26.68 | 29.75 |
| Solyc09g031580.2.1 | Tomato | nucleus | 26.38 | 29.51 |
| Bra024246.1-P | Field mustard | nucleus | 10.17 | 29.3 |
| CDY43768 | Canola | nucleus | 10.17 | 29.3 |
| CDY60050 | Canola | nucleus | 11.94 | 29.03 |
| CDX81205 | Canola | nucleus | 11.64 | 28.88 |
| PGSC0003DMT400043562 | Potato | nucleus | 19.16 | 28.29 |
| Solyc03g071550.1.1 | Tomato | nucleus | 19.97 | 28.14 |
| Bra037758.1-P | Field mustard | nucleus | 11.72 | 27.6 |
| AT5G63900.1 | Thale cress | nucleus | 11.2 | 27.29 |
| CDY52116 | Canola | nucleus | 24.32 | 23.09 |
| Solyc06g082050.1.1 | Tomato | nucleus | 5.67 | 22.65 |
| TraesCS3B01G451700.2 | Wheat | nucleus | 10.39 | 20.03 |
| CDX80351 | Canola | golgi, plasma membrane | 14.59 | 19.72 |
| TraesCS7B01G489100.1 | Wheat | nucleus, plastid | 12.68 | 16.46 |
| TraesCS3B01G582800.1 | Wheat | nucleus | 11.86 | 14.99 |
| TraesCS5B01G391200.1 | Wheat | nucleus | 14.08 | 13.66 |
| TraesCS2B01G257600.3 | Wheat | nucleus | 14.37 | 13.03 |
| TraesCS4B01G204700.1 | Wheat | cytosol | 9.36 | 12.52 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 13.49 | 12.16 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 13.56 | 11.23 |
Protein Annotations
| MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant |
| InterPro:GNAT_dom | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF00628 |
| PFAM:PF05641 | PFAM:PF16135 | ScanProsite:PS01359 | PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 |
| PANTHER:PTHR42672:SF9 | SMART:SM00249 | SMART:SM00743 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS4B01G194600 |
| EnsemblPlants:TraesCS4B01G194600.1 | InterPro:Zinc_finger_PHD-type_CS | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| TIGR:cd04301 | TIGR:cd15567 | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr4B:-:418344963..418352429
Molecular Weight (calculated)
151460.0 Da
IEP (calculated)
6.933
GRAVY (calculated)
-0.434
Length
1357 amino acids
Sequence
(BLAST)
(BLAST)
0001: MPRGAVKRRR EPSPVAAAGE RKLLPGEHVE VISFDPGLCG SWHQAVVIEI LDNFRSVRYI DFVDDSGSGS PLVEQVEVSD AIDGKSSAAR GSTRGKVRPV
0101: HPHQPLQVSD ASYGLWVDAL VEGSYWEGVI ADHAEGSMER KVFFPDEGDE RIMAVDQLRR TQDWDEVTGT WKPRGTWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT TEDNTWMCGT ESFWEGSLAA LIAELRSVCD KHTQDGNQIG DSCRSAETST SAAFQNKNVE SIVSDKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARAKRESA KHHLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHTNNL LLHSVTRNNE DCSSIGTDLI LRENKHHNKL SMDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN ETMRMKLKEH LLALGWSIVS KEDDIIRPNG QPSTIKRYRY KSPAGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEDIPDNCNH LAAHRVNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKL LRSKAKKFLK SAGWIVCQKM KSSKKRELRY HSPYGKSYKC
0601: LLAACKGYLE QGYQKENNAS SGITTDTFIA LGGGATDTSG RKDLLVSFLD RHDGTFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGTV TKDGIKCRCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLQ VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCSIC DLSDYDPDTN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFHHL QELIGKSIPT PVEGLSCTIL RFDRENASDH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQYRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SFSQRFELAE SSILSFQGTT
1101: ICQKILDATH HNPRDMSIQL VVNAEEIELG KNSIVSFERT TACDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELKVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQNVSSNAFS HPEELNGSDY QLECTSIVRE ALESDSQEST SVGVEDRDQP EPELLLEIRS NSSEEGNCAV GVPIITPNPE VNFTVDSHGQ
1301: PYDSVGADQC SESCVSTEVK PVVAAPGSKY KGKCYERNRW SNGRRKLEMH GYGVSTK
0101: HPHQPLQVSD ASYGLWVDAL VEGSYWEGVI ADHAEGSMER KVFFPDEGDE RIMAVDQLRR TQDWDEVTGT WKPRGTWLFL QMLLSHEEKD GLPVSVRQIW
0201: YDLRSNLSLT TEDNTWMCGT ESFWEGSLAA LIAELRSVCD KHTQDGNQIG DSCRSAETST SAAFQNKNVE SIVSDKLDSA SAAICRTMLE FISYYRNNDR
0301: ISARAKRESA KHHLKSVGWT FVDDRAKNRY CVSPDGKRFA SFIAACEAYL AQKGCHTNNL LLHSVTRNNE DCSSIGTDLI LRENKHHNKL SMDASASWMP
0401: VQLDAKFSPP IASLLASYQE VTSFSQGQIN ETMRMKLKEH LLALGWSIVS KEDDIIRPNG QPSTIKRYRY KSPAGKTYVS FLQVLRSFAV QCIKRVKGNN
0501: TEDIPDNCNH LAAHRVNLDA AVSRDLATLG KRKRENKSDV VGKYVDCVEA DVQNVRKKKL LRSKAKKFLK SAGWIVCQKM KSSKKRELRY HSPYGKSYKC
0601: LLAACKGYLE QGYQKENNAS SGITTDTFIA LGGGATDTSG RKDLLVSFLD RHDGTFSWPT CHVKSKKRKS SSVPMSHARV LSSTHGQILP YQHRAKTVLS
0701: LLVDKNILLP RVKLTYKQRS DGPRLKEGTV TKDGIKCRCC NELFTLESFE VHAGCSTRLP AAHIFLKDGR SLSQCLVELM GENKPKESLQ VRLKTNCSDT
0801: ESDSICSICN EGGEILLCDN CPSSFHHACV GLEATPEGSW YCPSCRCSIC DLSDYDPDTN QFTEKTIMYC DQCEREYHVG CMRNKGDQLT CCPEGCWFCS
0901: RGCSEIFHHL QELIGKSIPT PVEGLSCTIL RFDRENASDH GDFYNEIMAE QYGKLCIALD VLHECFVTII EPRTRRDLSE DIVFNRESGL RRLNFRGFYT
1001: ILLQKDGELI SVGTFRVCGK KFAELPLIGT RIQYRRQGMC RLLMNELEKL LSGLGVERLI LPAIPQLLET WTGSFGFTAM SFSQRFELAE SSILSFQGTT
1101: ICQKILDATH HNPRDMSIQL VVNAEEIELG KNSIVSFERT TACDTVVNNA SNHSEELKVT AQTNYNSLAC DTVVNNASNH SEELKVTAQT NYNSLALAEN
1201: SVFSSWGTTI CQNVSSNAFS HPEELNGSDY QLECTSIVRE ALESDSQEST SVGVEDRDQP EPELLLEIRS NSSEEGNCAV GVPIITPNPE VNFTVDSHGQ
1301: PYDSVGADQC SESCVSTEVK PVVAAPGSKY KGKCYERNRW SNGRRKLEMH GYGVSTK
0001: MPAAEEEEPI FGWNSTGRRN LRRKKLLDGD KIEVRSLEEG SLGSWYLGTV TSAKKRRRRC IRYDNILSDD GSGNLVETVD VSDIVEGLDD CTDVSDTFRG
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
0101: RLRPVPPKLD VAKLNLAYGL CVDVFFSDAW WEGVLFDHEN GSEKRRVFFP DLGDELDADL QSLRITQDWN EATETWECRG SWLFLDLIEI YKEYNYLPVS
0201: VKQLWYDIRD RIGFVRIQEW TCSTKHLWQD LMLGVIEDNL KITIDQFLHD FDAERYPQLK LLNEASQAVY ETNACLSGML TIAPQEHQFS CIDKDFKPAS
0301: QRCQSLSVLT SVSGIRSEAS DINKATEISS KKSTAAHKKD ILHKKPGIWH PFDCLAKSGP QAVSSFIRSP LLPMAMHVRM HLKYMGWTIE HMVDEAGRQR
0401: FRYLSPNGRL KEHSLRQVCF RLKQPDKSLT TPGMANPPSL SSENQTYSTQ EMRSIVLALP AFNRSVALGE GLKLSTDTLL EYETQGNEEV FTRESRNFCP
0501: KKAFPGQKET LRVRIEPKTK AQGIILRLKS KRKQTPKKDE VIVGLQNVNR SMRRGHTSKK LMDIKNRVTS RGKTRVLRSR KRAQRVITPI SRKHSPRNIL
0601: SWLMDNNVVL PRENIRCCNQ KDTTVRKEGK LTREGIKCSC CRRVFTINGF EVHANGASCS GAANIFLDDG RSLLECQVEA YKKRKKAQPP DMLKMKLRQG
0701: ENDVFCSVCH YGGKLILCDG CPSAFHANCL GLEDVPDGDW FCQSCCCGAC GQFFLKTTST NAKEEKFISC KQCELKYHPS CLRYDGACDS LDKILGEKWF
0801: CSKDCEEIFV ILYDLIGKPR EVSVEKLTWR LVQSLEPNMY GDDASKIEAA AENHCILSVA LDVMHELFEP VKRPHGGRDL AEDVIFSRWS KFKRLNFSGF
0901: YTVLLERNNE LVSVATVRIL GKKVAEMPFI GTRFQHRQRG MCRVLINELE KVLIDLGVER LVLPAVPCVL NTWINSFGFT KMTISERKNF LKFTLLEFGR
1001: TILCEKILIK SGVADPIPSI ASLGEQQCDI LRIEDNSASD DGSEVHQAEQ HLEESRSTKN PPEEIKTQEE RLLIKKENRI VKFYSRRRSK CMRLT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.