Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 43.36 | 72.98 |
| VIT_02s0234g00060.t01 | Wine grape | cytosol | 4.71 | 44.44 |
| KRH30259 | Soybean | nucleus | 34.54 | 43.4 |
| PGSC0003DMT400043562 | Potato | nucleus | 33.19 | 42.98 |
| Zm00001d008232_P001 | Maize | cytosol | 11.09 | 41.25 |
| PGSC0003DMT400056776 | Potato | nucleus | 42.1 | 41.17 |
| Solyc03g071550.1.1 | Tomato | nucleus | 33.28 | 41.12 |
| KRH30263 | Soybean | nucleus | 40.08 | 41.12 |
| Solyc09g031580.2.1 | Tomato | nucleus | 41.68 | 40.89 |
| KRH72700 | Soybean | nucleus | 37.31 | 40.4 |
| KRH17051 | Soybean | nucleus | 35.38 | 39.91 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 5.71 | 37.57 |
| GSMUA_AchrUn_... | Banana | nucleus | 29.08 | 35.97 |
| KXG31496 | Sorghum | cytosol, extracellular | 3.11 | 35.24 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 18.07 | 33.39 |
| GSMUA_Achr6P32880_001 | Banana | nucleus | 29.66 | 33.3 |
| TraesCS2D01G083000.1 | Wheat | nucleus | 17.98 | 33.13 |
| TraesCS2B01G099800.1 | Wheat | nucleus | 18.07 | 32.82 |
| Zm00001d022583_P001 | Maize | nucleus | 18.74 | 31.86 |
| VIT_06s0061g00820.t01 | Wine grape | cytosol | 3.78 | 30.0 |
| Zm00001d028749_P002 | Maize | mitochondrion | 30.42 | 28.44 |
| TraesCS4B01G194600.1 | Wheat | nucleus | 30.67 | 26.9 |
| TraesCS4D01G195300.1 | Wheat | nucleus | 30.59 | 26.82 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 30.5 | 26.73 |
| VIT_08s0007g04490.t01 | Wine grape | mitochondrion | 9.92 | 25.11 |
| VIT_06s0061g00840.t01 | Wine grape | nucleus | 13.45 | 19.42 |
| VIT_08s0040g03340.t01 | Wine grape | nucleus | 12.52 | 16.99 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 17.56 | 14.76 |
| VIT_05s0020g03420.t01 | Wine grape | nucleus | 17.56 | 14.6 |
| VIT_06s0061g00830.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 9.16 | 14.34 |
| VIT_07s0151g00870.t01 | Wine grape | nucleus | 16.72 | 12.32 |
| VIT_05s0020g03450.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| EntrezGene:100243375 | wikigene:100243375 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase |
| InterPro:Agenet-like_dom | InterPro:Agenet_dom_plant | ProteinID:CCB43466 | ProteinID:CCB43466.1 | UniProt:F6GUQ3 | EMBL:FN594951 |
| InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0008080 | GO:GO:0016740 |
| GO:GO:0046872 | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | EntrezGene:LOC100243375 |
| wikigene:LOC100243375 | PFAM:PF00628 | PFAM:PF05641 | PFAM:PF16135 | PFscan:PS50016 | PFscan:PS51186 |
| PFscan:PS51257 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF9 | SMART:SM00249 | SMART:SM00743 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | UniParc:UPI0002108655 | ArrayExpress:VIT_06s0004g06810 | EnsemblPlantsGene:VIT_06s0004g06810 | EnsemblPlants:VIT_06s0004g06810.t01 | RefSeq:XP_002278840 |
| RefSeq:XP_002278840.2 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg |
Description
No Description!
Coordinates
chr6:+:7510826..7517504
Molecular Weight (calculated)
135556.0 Da
IEP (calculated)
7.919
GRAVY (calculated)
-0.457
Length
1190 amino acids
Sequence
(BLAST)
(BLAST)
0001: MCENLKVRSV EEGLLGSWHS GTIIGCDYLV RNVKYSEILD DRMGERFLES VSVSGAIEGT SVVDTDQCNH RGRIRPLPPQ CDFGKWNLHY GLCVDVFFRE
0101: AWWEGVIFDH EDGLENRKVF FPDLGDELTV GVDNIRITQD WNEGTATWER RRNWLFLELI EEYEQDWPLN VSLKQIWYDV REKKGFEKVK EWTCPSNALW
0201: RELVREAIAD NFRITLNKIC SMLKPEVLAN CHAVEPIRGI SPLDGSMMMT NNDANATNSG DYSIGLVDKL VENGGLATRF QYTDPKCSSN QHVQEKHEVD
0301: GVIPFVENSG LDMPYRDKEM SVQPQPLLVI PSKPNKLENF TFDCKSEGYS NNPSANRKND WRRVDTDILH GAESCFDAII EYALISSGKR KPPNSLTENV
0401: RKHLSYLGWK IEFMNKDFPR FRYTSPEGKT YLSLRQVCQD LRRPDAGIDS PISQDDQRSL LSPYDDLAFP LVKLQVNDLS SQLIEKSQVS KGKWTVPSHD
0501: DRVDIDHEYC PQAVVNYYFL GLDKKEHHSR KDDIRSLNLK SKAKKHLSFM GWTFWYAYRR GKREMRYFSP KGKCYYSLRT ACKGCMDEGG ASEGTSTTWN
0601: PVKTMNVSEV ALGQELSSAL IDMRMQNSLI EQNVPSAKWP IKSSSISQLK SKEISAVTKK RHDGLHGVTS NSLQSWTQST GKDGFGIGLV GDRELRHPKD
0701: KNVCFSKLKN GKGSKALMRL NGLDGTRVLR SRKRARQVLI PGSSNNPRTI LSWLIDNNVV LPRAKVHYSS RRDHHPMADG RITRDGIKCS CCQEVFSLSR
0801: FEAHAGSSYH RSAANIFLED GRSLLECQMQ IIRDITGKGF TKESFSRKKS NERHHENDHI CSVCHYGGDL VLCDHCPSSF HKSCLGLKVG CFTLPEGDWF
0901: CPSCCCGICG ENKFDGGSEQ DNVVFSCYQC ERQYHVGCLR KWGHVKLASY PNGTWFCSKQ CKKIFLGLQK LLGKSFPVGV DNLTWTLLKP IRSKGLEIDL
1001: PDIEALTEVY SKLNIALGVM HECFEPVKEP HTRRDVVEDV IFCRGSDLNR LNFQGFYTVL LERNDELISV ATVRVYGEKV AEVPLIGTRF QYRRLGMCHI
1101: LMNELEKKLM ELGVERLVLP AVPSVLNTWT TSFGFSKMTD SERLRFLDYS FLDFQDTVMC QKLLMKIPLA KSNQSTGMFA ILSATLLKCE
0101: AWWEGVIFDH EDGLENRKVF FPDLGDELTV GVDNIRITQD WNEGTATWER RRNWLFLELI EEYEQDWPLN VSLKQIWYDV REKKGFEKVK EWTCPSNALW
0201: RELVREAIAD NFRITLNKIC SMLKPEVLAN CHAVEPIRGI SPLDGSMMMT NNDANATNSG DYSIGLVDKL VENGGLATRF QYTDPKCSSN QHVQEKHEVD
0301: GVIPFVENSG LDMPYRDKEM SVQPQPLLVI PSKPNKLENF TFDCKSEGYS NNPSANRKND WRRVDTDILH GAESCFDAII EYALISSGKR KPPNSLTENV
0401: RKHLSYLGWK IEFMNKDFPR FRYTSPEGKT YLSLRQVCQD LRRPDAGIDS PISQDDQRSL LSPYDDLAFP LVKLQVNDLS SQLIEKSQVS KGKWTVPSHD
0501: DRVDIDHEYC PQAVVNYYFL GLDKKEHHSR KDDIRSLNLK SKAKKHLSFM GWTFWYAYRR GKREMRYFSP KGKCYYSLRT ACKGCMDEGG ASEGTSTTWN
0601: PVKTMNVSEV ALGQELSSAL IDMRMQNSLI EQNVPSAKWP IKSSSISQLK SKEISAVTKK RHDGLHGVTS NSLQSWTQST GKDGFGIGLV GDRELRHPKD
0701: KNVCFSKLKN GKGSKALMRL NGLDGTRVLR SRKRARQVLI PGSSNNPRTI LSWLIDNNVV LPRAKVHYSS RRDHHPMADG RITRDGIKCS CCQEVFSLSR
0801: FEAHAGSSYH RSAANIFLED GRSLLECQMQ IIRDITGKGF TKESFSRKKS NERHHENDHI CSVCHYGGDL VLCDHCPSSF HKSCLGLKVG CFTLPEGDWF
0901: CPSCCCGICG ENKFDGGSEQ DNVVFSCYQC ERQYHVGCLR KWGHVKLASY PNGTWFCSKQ CKKIFLGLQK LLGKSFPVGV DNLTWTLLKP IRSKGLEIDL
1001: PDIEALTEVY SKLNIALGVM HECFEPVKEP HTRRDVVEDV IFCRGSDLNR LNFQGFYTVL LERNDELISV ATVRVYGEKV AEVPLIGTRF QYRRLGMCHI
1101: LMNELEKKLM ELGVERLVLP AVPSVLNTWT TSFGFSKMTD SERLRFLDYS FLDFQDTVMC QKLLMKIPLA KSNQSTGMFA ILSATLLKCE
001: MLGVIEDNLK ITIDQFLHDF DAERYPQLKL LNEASQAVYE TNACLSGMLT IAPQEHQFSC IDKDFKPASQ RCQSLSVLTS VSGIRSEASD INKATEISSK
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
101: KSTAAHKKDI LHKKPGIWHP FDCLAKSGPQ AVSSFIRSPL LPMAMHVRMH LKYMGWTIEH MVDEAGRQRF RYLSPNGRLK EHSLRQVCFR LKQPDKSLTT
201: PGMANPPSLS SENQTYSTQE MRSIVLALPA FNRSVALGEG LKLSTDTLLE YETQGNEEVF TRESRNFCPK KAFPGQKETL RVRIEPKTKA QGIILRLKSK
301: RKQTPKKDEV IVGLQNVNRS MRRGHTSKKL MDIKNRVTSR GKTRVLRSRK RAQRVITPIS RKHSPRNILS WLMDNNVVLP RENIRCCNQK DTTVRKEGKL
401: TREGIKCSCC RRVFTINGFE VHANGASCSG AANIFLDDGR SLLECQVEAY KKRKKAQPPD MLKMKLRQGE NDVFCSVCHY GGKLILCDGC PSAFHANCLG
501: LEDVPDGDWF CQSCCCGACG QFFLKTTSTN AKEEKFISCK QCELKYHPSC LRYDGACDSL DKILGEKWFC SKDCEEIFVI LYDLIGKPRE VSVEKLTWRL
601: VQSLEPNMYG DDASKIEAAA ENHCILSVAL DVMHELFEPV KRPHGGRDLA EDVIFSRWSK FKRLNFSGFY TVLLERNNEL VSVATVRILG KKVAEMPFIG
701: TRFQHRQRGM CRVLINELEK VLIDLGVERL VLPAVPCVLN TWINSFGFTK MTISERKNFL KFTLLEFGRT ILCEKILIKS GVADPIPSIA SLGEQQCDIL
801: RIEDNSASDD GSEVHQAEQH LEESRSTKNP PEEIKTQEER LLIKKENRIV KFYSRRRSKC MRLT
Arabidopsis Description
Gb [Source:UniProtKB/TrEMBL;Acc:Q9LUZ5]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.