Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 6
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400032367 | Potato | nucleus | 17.23 | 50.31 |
| Os04t0691700-01 | Rice | nucleus | 12.71 | 45.69 |
| VIT_02s0234g00060.t01 | Wine grape | cytosol | 3.88 | 43.65 |
| KRH27324 | Soybean | nucleus | 39.9 | 43.1 |
| Solyc07g062600.2.1 | Tomato | nucleus | 34.6 | 42.94 |
| KRH21991 | Soybean | nucleus | 39.69 | 42.77 |
| CDX98519 | Canola | nucleus | 33.55 | 42.52 |
| CDX97621 | Canola | nucleus | 33.12 | 42.1 |
| Bra027290.1-P | Field mustard | nucleus | 33.12 | 42.1 |
| AT3G14980.2 | Thale cress | nucleus | 35.1 | 41.8 |
| Zm00001d012354_P001 | Maize | cytosol | 9.18 | 41.27 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 24.01 | 35.9 |
| GSMUA_AchrUn_... | Banana | nucleus | 24.65 | 34.66 |
| KXG24184 | Sorghum | nucleus | 22.25 | 30.85 |
| VIT_06s0061g00820.t01 | Wine grape | cytosol | 3.04 | 28.67 |
| VIT_06s0004g06800.t01 | Wine grape | nucleus | 13.06 | 26.17 |
| OQU82646 | Sorghum | nucleus | 24.65 | 25.61 |
| Zm00001d026698_P011 | Maize | nucleus | 24.15 | 25.54 |
| Os04t0433900-00 | Rice | nucleus | 24.22 | 24.8 |
| Zm00001d003648_P002 | Maize | nucleus | 23.38 | 24.32 |
| VIT_08s0007g04490.t01 | Wine grape | mitochondrion | 8.05 | 24.26 |
| EES12185 | Sorghum | nucleus | 23.52 | 24.17 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 27.4 | 23.89 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 26.69 | 23.77 |
| TraesCS2B01G622700.1 | Wheat | nucleus | 27.12 | 23.44 |
| TraesCS2A01G305000.1 | Wheat | cytosol | 24.65 | 23.22 |
| TraesCS2D01G571900.2 | Wheat | nucleus | 27.19 | 23.08 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 24.22 | 22.79 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 24.15 | 22.63 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 24.15 | 21.28 |
| VIT_05s0020g03420.t01 | Wine grape | nucleus | 19.56 | 19.34 |
| VIT_08s0040g03340.t01 | Wine grape | nucleus | 11.37 | 18.36 |
| VIT_06s0004g06810.t01 | Wine grape | nucleus | 14.76 | 17.56 |
| VIT_06s0061g00840.t01 | Wine grape | nucleus | 10.03 | 17.23 |
| VIT_07s0151g00870.t01 | Wine grape | nucleus | 16.81 | 14.74 |
| VIT_06s0061g00830.t01 | Wine grape | endoplasmic reticulum, extracellular, golgi, nucleus, plasma membrane, vacuole | 7.13 | 13.29 |
| VIT_05s0020g03450.t01 | Wine grape | cytosol | 0.0 | 0.0 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | ProteinID:CCB46264 |
| ProteinID:CCB46264.1 | UniProt:F6H2P6 | EMBL:FN595229 | InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0003676 |
| GO:GO:0003677 | GO:GO:0003824 | GO:GO:0004402 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 | GO:GO:0006139 | GO:GO:0006259 | GO:GO:0006464 |
| GO:GO:0008080 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009506 | GO:GO:0009987 | GO:GO:0010385 |
| GO:GO:0016043 | GO:GO:0016740 | GO:GO:0019538 | GO:GO:0042393 | GO:GO:0043971 | GO:GO:0043972 |
| GO:GO:0044030 | GO:GO:0044154 | GO:GO:0046872 | GO:GO:0080188 | InterPro:IDM1 | InterPro:IPR000182 |
| InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF00628 | PFAM:PF16135 | PFscan:PS50016 |
| PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 | SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 |
| UniParc:UPI000210953F | ArrayExpress:VIT_19s0014g01500 | EnsemblPlantsGene:VIT_19s0014g01500 | EnsemblPlants:VIT_19s0014g01500.t01 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD |
| InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chr19:-:1594097..1607982
Molecular Weight (calculated)
157090.0 Da
IEP (calculated)
6.026
GRAVY (calculated)
-0.439
Length
1416 amino acids
Sequence
(BLAST)
(BLAST)
0001: MLLSKEIEDL HDDDFEGSND ECRIFREVFF RNNTDSASKR FLVTGFINFE CEDNKQTDTS LCSNSENSAV TSQSSKDLYM GDSCNVPEDS RGTSGPVSFS
0101: ERFTLVEGND HDVNVKRMKL SDDELCNLKP DFEKFFDSSA PLKEIVSGMS PPASESVYKK VRCHLVESSD QGVKYRCYLL KRHLQMERAC SFSDRDAMKC
0201: RLSSLDGSDR KEVVVSKAIA SPVSQESFAT KLLVASPPVA VADKSGPPLF SEDRPKKSVF LELDALYASP SVESLKDPRP LLHDHINHVL IAAGWSIEKR
0301: KRNSRPHEES VYRSPEGRPI REFPKAWRLC GENLFADRYS LVQENDAKEW TDISQFWSNL SNVLTYIDKK INEAETAITL AHRWSLLDPF ITVVFIDKKI
0401: GALRKGNAVT AKRSIVVEKK QKNNAVLVMK DVGCIKNQFA RRDLPAAISD SSLASGSALT VFEGTYHMAD EKGEQFGDGR PLKFDTVDAM ANQGGGMLEK
0501: KRSSLDPSSL QACVSDGMCI QSGKGLYDVP ITSENVDVMR SETVSPHQDS NMNSPSCDKQ ILDHNMELSV DIVKAASNDM WDEKDEWLEG LVTDKVGSHL
0601: LQSLEDVPNC TIKNGLAQGD DPDKTYAQLD FSLCGDAPIS HKIVIPGVLH PSGHIRNEGG RAVQASELKT DGTYLSADAI LKKKMRRKSK KISEIKLSTL
0701: YRNEILGLPL PSRAELQNIH EHDPELESEE MEESLMAIAR NNGGCKRSSS LSSSQCQSER KRSKFKKFHH SVDSSGGLVQ VVHDGDFSEE FNIENNTNNE
0801: SLHVNIGSKP ETKYGNGQRN SSSCQIEDDD LLIAAIIQNR NASSSTKRPS SKMKVKKSKA PNKLKKRKGN CKLLPRSVGK GGRQATDGKW TSSGVRTVLS
0901: WLIDAGVISS NDVIQYRNLK DNAVVKDGYV TRDGIVCKCC TELFSVCNFK IHAGFKLNRP CRNLFMESGK SFTLCQLQAW STEYKVRKGG IKNVQIDEID
1001: QNDDSCGLCG DGGELICCDN CPSTFHQACL SAKELPEGNW YCPNCTCRIC GDLVKDREAS SSFLALKCSQ CEHKYHMPCL KEKCVKEVGG DARFCGENCQ
1101: EIYSGLQGLL GFVNHIADGF TWTLLRCIHD DQKVHSSQKL ALKAECNSKL AVALTIMEEC FLSMVDPRTG IDMIPHVLYN RGSDFARLNF NGFYTVVLEK
1201: DDALVSVASI RVHGVTVAEM PLIATYEKFR SKGMCRLLMN AIEKMLKSVK VEKIVVAAIP SLVETWTLGF GFKPVEDDEK ASLKKINLMV FPGTILLKKS
1301: LYENQETDKQ AGTDCALPLE AAKLTKLDAS IKEELVIESA QLSNANCCVE GGAEMEIGCP DSQNLQVGES YEELASTIVD SQLELAPNVE SESVYDVRQL
1401: SPMEQSQKAD MLDEQQ
0101: ERFTLVEGND HDVNVKRMKL SDDELCNLKP DFEKFFDSSA PLKEIVSGMS PPASESVYKK VRCHLVESSD QGVKYRCYLL KRHLQMERAC SFSDRDAMKC
0201: RLSSLDGSDR KEVVVSKAIA SPVSQESFAT KLLVASPPVA VADKSGPPLF SEDRPKKSVF LELDALYASP SVESLKDPRP LLHDHINHVL IAAGWSIEKR
0301: KRNSRPHEES VYRSPEGRPI REFPKAWRLC GENLFADRYS LVQENDAKEW TDISQFWSNL SNVLTYIDKK INEAETAITL AHRWSLLDPF ITVVFIDKKI
0401: GALRKGNAVT AKRSIVVEKK QKNNAVLVMK DVGCIKNQFA RRDLPAAISD SSLASGSALT VFEGTYHMAD EKGEQFGDGR PLKFDTVDAM ANQGGGMLEK
0501: KRSSLDPSSL QACVSDGMCI QSGKGLYDVP ITSENVDVMR SETVSPHQDS NMNSPSCDKQ ILDHNMELSV DIVKAASNDM WDEKDEWLEG LVTDKVGSHL
0601: LQSLEDVPNC TIKNGLAQGD DPDKTYAQLD FSLCGDAPIS HKIVIPGVLH PSGHIRNEGG RAVQASELKT DGTYLSADAI LKKKMRRKSK KISEIKLSTL
0701: YRNEILGLPL PSRAELQNIH EHDPELESEE MEESLMAIAR NNGGCKRSSS LSSSQCQSER KRSKFKKFHH SVDSSGGLVQ VVHDGDFSEE FNIENNTNNE
0801: SLHVNIGSKP ETKYGNGQRN SSSCQIEDDD LLIAAIIQNR NASSSTKRPS SKMKVKKSKA PNKLKKRKGN CKLLPRSVGK GGRQATDGKW TSSGVRTVLS
0901: WLIDAGVISS NDVIQYRNLK DNAVVKDGYV TRDGIVCKCC TELFSVCNFK IHAGFKLNRP CRNLFMESGK SFTLCQLQAW STEYKVRKGG IKNVQIDEID
1001: QNDDSCGLCG DGGELICCDN CPSTFHQACL SAKELPEGNW YCPNCTCRIC GDLVKDREAS SSFLALKCSQ CEHKYHMPCL KEKCVKEVGG DARFCGENCQ
1101: EIYSGLQGLL GFVNHIADGF TWTLLRCIHD DQKVHSSQKL ALKAECNSKL AVALTIMEEC FLSMVDPRTG IDMIPHVLYN RGSDFARLNF NGFYTVVLEK
1201: DDALVSVASI RVHGVTVAEM PLIATYEKFR SKGMCRLLMN AIEKMLKSVK VEKIVVAAIP SLVETWTLGF GFKPVEDDEK ASLKKINLMV FPGTILLKKS
1301: LYENQETDKQ AGTDCALPLE AAKLTKLDAS IKEELVIESA QLSNANCCVE GGAEMEIGCP DSQNLQVGES YEELASTIVD SQLELAPNVE SESVYDVRQL
1401: SPMEQSQKAD MLDEQQ
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGKANSSL PLSRTNFI
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGKANSSL PLSRTNFI
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.