Subcellular Localization
min:
: max
Winner_takes_all: nucleus, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2A01G305000.1 | Wheat | cytosol | 86.96 | 87.43 |
| TraesCS2B01G321800.1 | Wheat | nucleus | 86.96 | 87.31 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 87.62 | 82.39 |
| Os04t0433900-00 | Rice | nucleus | 54.33 | 59.36 |
| Zm00001d003648_P002 | Maize | nucleus | 51.09 | 56.72 |
| EES12185 | Sorghum | nucleus | 51.62 | 56.6 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 25.35 | 40.44 |
| PGSC0003DMT400032367 | Potato | nucleus | 11.78 | 36.7 |
| Solyc07g062600.2.1 | Tomato | nucleus | 20.38 | 26.99 |
| CDX98519 | Canola | nucleus | 18.33 | 24.8 |
| Bra027290.1-P | Field mustard | nucleus | 18.2 | 24.69 |
| CDX97621 | Canola | nucleus | 18.2 | 24.69 |
| AT3G14980.2 | Thale cress | nucleus | 19.13 | 24.31 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 22.63 | 24.15 |
| KRH21991 | Soybean | nucleus | 20.85 | 23.97 |
| KRH27324 | Soybean | nucleus | 20.52 | 23.65 |
| HORVU4Hr1G056300.1 | Barley | extracellular | 2.78 | 23.2 |
| HORVU2Hr1G126690.2 | Barley | nucleus | 23.69 | 22.52 |
| HORVU7Hr1G122600.9 | Barley | cytosol, nucleus | 9.0 | 18.18 |
| HORVU5Hr1G094760.8 | Barley | nucleus | 12.24 | 13.7 |
| HORVU2Hr1G054040.7 | Barley | nucleus | 12.71 | 13.17 |
| HORVU4Hr1G059010.32 | Barley | plastid | 7.74 | 12.06 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | UniProt:A0A287IHI3 | InterPro:Acyl_CoA_acyltransferase |
| InterPro:GNAT_dom | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0046872 | EnsemblPlantsGene:HORVU2Hr1G075850 | EnsemblPlants:HORVU2Hr1G075850.12 |
| InterPro:IDM1 | InterPro:IPR000182 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | PFAM:PF16135 |
| PFscan:PS50016 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 | SMART:SM00249 | SUPFAM:SSF55729 |
| SUPFAM:SSF57903 | UniParc:UPI000B4708C8 | InterPro:Znf_FYVE_PHD | InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:546367521..546377780
Molecular Weight (calculated)
168458.0 Da
IEP (calculated)
6.121
GRAVY (calculated)
-0.445
Length
1511 amino acids
Sequence
(BLAST)
(BLAST)
0001: LQFAPVSRMD EVDFLVGIGM KEEDIATMLF GEKVAELRED TFDGSQQEKQ ILEGIFGRGQ TASLPGAIKA LVPASTPSGS ASSNRMVYCR IVESFTHGSL
0101: SSYHVLYHSV SQQMQNAMAF TDHARPSESE LVVQETPPSV DRVYTRRAVI RRSQRAKRCS VLDWEKVDIN SVVTQRRDGR GGYGMLWNHL RLHAHLLMMD
0201: AGWKIEGRER GDKSKVDLMF ESPDKEIRLA SLPKAWKCFG QWLLIHSSRF DGNYYGKEWF NIYDFCYDLK NTLLCLEHEV RHPKQSLSFL HQWQLLDPFM
0301: AVVCIDKKVA ALRNGVALKA VNSRITILGC SDTKLLSRRN VNKPVDIKYS SKYNNTHPKS RKSLLPLLLS DGQPDRGGNS LHNEQSFIFG TSKHSQNEVP
0401: QRYLTMEEMN ERSIRNTAHR IVKGFQDATD HSSMPTCFST KRELPYSIMA QDIPDESDPL YFPPNYSSDH LVENVQIKGP SSHAGEVMEI AANMGNSADS
0501: PADELLIRPE LLFSHEVDEM ILGMTNDVSN VHHGAAAAVA SEYQAGNEVI RDGPSSGTLS LLEEKDACLE AIRDDVNSEH DVIVPGFQAG NVHVWDEPST
0601: GALSLLTEKD TPLEAIRDDI NNEHDVVVVP GFQVGNEDVS GGPSSGTLSL LTEKDTNLEA RDMSLEQMTR TGWVSSEATG NPLKISEPQV LFVSPQDGRL
0701: SFMNNSTSNQ EMLSCLNFSR DSMGANMHVD IPTSAYEASL IQGFLYLDSE GSPIGWEVIN PEPPKQLICG PSSEPNSNVS GYCGDLNMQN EARTSEQREI
0801: SESDPSKKGQ KRSEKAVGVK DDVRKTKQKV NYVHVSHSAT GKSMDITTEV PASRCVFGNG GEQTGATSSE HVSSNQKRSH EVAEIQVVCK KKQKVNDGPI
0901: SDSIIGECMD ITAENYTGCV NRSEEVEISA SSSWQVQVPL NLVPEIKEHK ERAEDSSEPQ KQLVSKQAPT KDVKFRKKQP WTRKSRFDED DLLMTAIIHR
1001: LTARYRNHYN RMLINRIGLK SLPRSRLENE KKCGRQKFPK SARTVLSKLL EMGIVCTMNI LQYRRPGPKN VLKDGNITEH GIRCRCCDTI FTVSNFRCHA
1101: GLKQEIPTLN LFLGSGKSYS LCQLQAWFIE QKKRKERAKD TMSVQADEND DTCGLCGDVG ELICCDNCPA SYHQDCLPCQ EVPDGSWYCS SCLCNVCGEV
1201: INSKAPGGLL HALECSQCEY RYHVKCISGK VVWDQRSGLG TWFCERKCQQ QIYTSMRSRV GMPDHLNDGF SCTTLRNNDD QKVHSASNIT LLAECNMKLI
1301: IALSILEECF LPILDPRTGV DIMPPIVYNW RSDFVHLDYK GFYTVVLEKD DNILSVASIR LHGAAVAEMP LIATCSENRQ QGMCRQLVDY IEEILKSLEV
1401: EMLLLFAIPN LVDTWTSAFG FRPIEDCDKK KLSKVRLVSI PGTVLLKKDL YERGSETEAG GLQTGQPQAL EDTGPVCATE TNLVDELGGS ETNPPRTGPP
1501: LAVALGKCHV N
0101: SSYHVLYHSV SQQMQNAMAF TDHARPSESE LVVQETPPSV DRVYTRRAVI RRSQRAKRCS VLDWEKVDIN SVVTQRRDGR GGYGMLWNHL RLHAHLLMMD
0201: AGWKIEGRER GDKSKVDLMF ESPDKEIRLA SLPKAWKCFG QWLLIHSSRF DGNYYGKEWF NIYDFCYDLK NTLLCLEHEV RHPKQSLSFL HQWQLLDPFM
0301: AVVCIDKKVA ALRNGVALKA VNSRITILGC SDTKLLSRRN VNKPVDIKYS SKYNNTHPKS RKSLLPLLLS DGQPDRGGNS LHNEQSFIFG TSKHSQNEVP
0401: QRYLTMEEMN ERSIRNTAHR IVKGFQDATD HSSMPTCFST KRELPYSIMA QDIPDESDPL YFPPNYSSDH LVENVQIKGP SSHAGEVMEI AANMGNSADS
0501: PADELLIRPE LLFSHEVDEM ILGMTNDVSN VHHGAAAAVA SEYQAGNEVI RDGPSSGTLS LLEEKDACLE AIRDDVNSEH DVIVPGFQAG NVHVWDEPST
0601: GALSLLTEKD TPLEAIRDDI NNEHDVVVVP GFQVGNEDVS GGPSSGTLSL LTEKDTNLEA RDMSLEQMTR TGWVSSEATG NPLKISEPQV LFVSPQDGRL
0701: SFMNNSTSNQ EMLSCLNFSR DSMGANMHVD IPTSAYEASL IQGFLYLDSE GSPIGWEVIN PEPPKQLICG PSSEPNSNVS GYCGDLNMQN EARTSEQREI
0801: SESDPSKKGQ KRSEKAVGVK DDVRKTKQKV NYVHVSHSAT GKSMDITTEV PASRCVFGNG GEQTGATSSE HVSSNQKRSH EVAEIQVVCK KKQKVNDGPI
0901: SDSIIGECMD ITAENYTGCV NRSEEVEISA SSSWQVQVPL NLVPEIKEHK ERAEDSSEPQ KQLVSKQAPT KDVKFRKKQP WTRKSRFDED DLLMTAIIHR
1001: LTARYRNHYN RMLINRIGLK SLPRSRLENE KKCGRQKFPK SARTVLSKLL EMGIVCTMNI LQYRRPGPKN VLKDGNITEH GIRCRCCDTI FTVSNFRCHA
1101: GLKQEIPTLN LFLGSGKSYS LCQLQAWFIE QKKRKERAKD TMSVQADEND DTCGLCGDVG ELICCDNCPA SYHQDCLPCQ EVPDGSWYCS SCLCNVCGEV
1201: INSKAPGGLL HALECSQCEY RYHVKCISGK VVWDQRSGLG TWFCERKCQQ QIYTSMRSRV GMPDHLNDGF SCTTLRNNDD QKVHSASNIT LLAECNMKLI
1301: IALSILEECF LPILDPRTGV DIMPPIVYNW RSDFVHLDYK GFYTVVLEKD DNILSVASIR LHGAAVAEMP LIATCSENRQ QGMCRQLVDY IEEILKSLEV
1401: EMLLLFAIPN LVDTWTSAFG FRPIEDCDKK KLSKVRLVSI PGTVLLKKDL YERGSETEAG GLQTGQPQAL EDTGPVCATE TNLVDELGGS ETNPPRTGPP
1501: LAVALGKCHV N
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.