Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G321800.1 | Wheat | nucleus | 95.81 | 95.68 |
| TraesCS2D01G303600.2 | Wheat | cytosol | 95.54 | 89.36 |
| HORVU2Hr1G075850.12 | Barley | cytosol, nucleus | 87.43 | 86.96 |
| Os04t0433900-00 | Rice | nucleus | 53.96 | 58.64 |
| Zm00001d003648_P002 | Maize | nucleus | 51.83 | 57.24 |
| EES12185 | Sorghum | nucleus | 52.43 | 57.18 |
| GSMUA_Achr6P25440_001 | Banana | nucleus | 25.75 | 40.87 |
| PGSC0003DMT400032367 | Potato | nucleus | 12.04 | 37.32 |
| Solyc07g062600.2.1 | Tomato | nucleus | 20.89 | 27.52 |
| CDX98519 | Canola | nucleus | 18.36 | 24.71 |
| VIT_19s0014g01500.t01 | Wine grape | nucleus | 23.22 | 24.65 |
| AT3G14980.2 | Thale cress | nucleus | 19.36 | 24.47 |
| Bra027290.1-P | Field mustard | nucleus | 18.1 | 24.42 |
| CDX97621 | Canola | nucleus | 18.03 | 24.33 |
| KRH21991 | Soybean | nucleus | 21.09 | 24.12 |
| KRH27324 | Soybean | nucleus | 20.82 | 23.87 |
| TraesCS3A01G416700.1 | Wheat | nucleus, plastid | 10.45 | 22.4 |
| TraesCS2A01G085100.1 | Wheat | nucleus | 9.38 | 21.89 |
| TraesCS2A01G563500.2 | Wheat | nucleus | 23.49 | 21.74 |
| TraesCS3A01G514100.1 | Wheat | plastid | 11.78 | 16.53 |
| TraesCS7A01G569600.1 | Wheat | nucleus, plastid | 9.58 | 15.32 |
| TraesCS5A01G386300.1 | Wheat | nucleus | 13.17 | 14.44 |
| TraesCS2A01G235700.1 | Wheat | nucleus | 13.57 | 13.61 |
| TraesCS4A01G109600.1 | Wheat | nucleus | 12.04 | 13.33 |
| TraesCS7A01G002000.1 | Wheat | nucleus | 7.65 | 11.69 |
| TraesCS4A01G099600.1 | Wheat | cytosol | 7.45 | 11.05 |
| TraesCS4A01G498600.2 | Wheat | nucleus, plastid | 8.18 | 10.63 |
Protein Annotations
| MapMan:12.5.3.2.2 | MapMan:15.5.30 | Gene3D:3.30.40.10 | Gene3D:3.40.630.30 | InterPro:Acyl_CoA_acyltransferase | InterPro:GNAT_dom |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0035556 | InterPro:IDM1 |
| InterPro:IPR000182 | InterPro:IPR002219 | InterPro:IPR013083 | InterPro:IPR019787 | InterPro:Jas | InterPro:PE/DAG-bd |
| PFAM:PF16135 | PFscan:PS50016 | PFscan:PS50081 | PFscan:PS51186 | PANTHER:PTHR42672 | PANTHER:PTHR42672:SF1 |
| SMART:SM00249 | SUPFAM:SSF55729 | SUPFAM:SSF57903 | EnsemblPlantsGene:TraesCS2A01G305000 | EnsemblPlants:TraesCS2A01G305000.1 | InterPro:Znf_FYVE_PHD |
| InterPro:Znf_PHD | InterPro:Znf_PHD-finger | InterPro:Znf_RING/FYVE/PHD | SEG:seg | : | : |
Description
No Description!
Coordinates
chr2A:-:524532795..524543156
Molecular Weight (calculated)
167605.0 Da
IEP (calculated)
6.248
GRAVY (calculated)
-0.470
Length
1503 amino acids
Sequence
(BLAST)
(BLAST)
0001: MDEVDFLVGI GMKEEDIATM LFGEKVAELR EDTFDGSEQE KQILEGIFGS GQTTSLPGAI KALVPASTPS GSASSNRMVY CRIVESFTHG SLSSYHVLYH
0101: SANQQMQNAM PCTDHHGRPS ECELVVQETP PSGDRVYTRR AVIRRSQRAK QCSILGWERV DINSVVAQRR DGRGGFGMLW NHLRLHAHLL MMDAGWKIEG
0201: KERGDKSKVD LMFESPDKEI RLASLPKAWK CFGQWLLIHS SRFDGNYYGK EWFNMYEFCY DLKNTLLCLE HEVRRPKQSL SFLHQWQLLD PFMAVVCIDK
0301: KVAALRNGVA LKAVNSRVTI LNCSDIKLLS RLSRRNVNKP VAIKYSSNYS DTHPKSRRSL LPLLLSDGQP HKEENSLHNE QSFMFGTSKH SQYEVQQRYL
0401: TMQEMNERSV RNIPHHIVKG FQDATEHSSM PTCFSTKREF PYCKMVQDTR DESDPPYFPP SYASDQLVEN VQIKVPSSHA GEAMEIAADM GNSADSPSDK
0501: LLIRPDLLFS HEVDEMILGT TDGVSNEHHA AAVVSDYQAG TEDGRGGPSS GTLSLPEEKD ARLEAIRDDV NNEHDIVVPG FQAGNVHVRD EPSAGALSLL
0601: AEKDTPLEVI RDDINNEHDV VVVPGFQVGN DDVRGGPSSG TLSLLKAKGT NLEAKDMSLE QMTKTGWVPS GATGGPLKIS EPQVLFVSPQ DGRLSFMNNS
0701: TFNQDTLSCL NFSHDSMGAN MQLEIQTSAY EASLIQGFLY LDSEGSPIGW EVINPEPPNQ LICGPSSEPN SKVSGHCGEL NMQNEALTSE QREISESDPS
0801: KNGQKRCEKV AGIKDDVRRK KQKVNSVHAS HCAIGKNMDI TTEVPASFVV HNGKEQIGAT SSEHASSNHK RSQDAADIQD EVREKKQKVN DGLISDSIIG
0901: QCMDSSTTEN PTRCVTHCEE VQISASSHEQ VSLTLVPEIK EHKEQAEDSS EPPKQLVSEQ PPKKDVKFRK KQPWTRKCRF DEDDLLMTAV IHRLTARYRN
1001: HYNRMLINRI GLKSLPRSRL ENEKKCGRQK FPKSARTVLS KLLEMGIVCT MNILQYRRPG PKNVLKDGNI TEHGIRCRCC DTIFTMSNFR CHAGLKQETL
1101: TLNLFLGSGK SYSLCQLQAW FIEQKKRKER AKDTMSVQAD ENDDTCGLCG DVGELICCDN CPASYHQACL PCQEVPDGNW YCSSCLCNVC GEVVNSKAPG
1201: GLLHALECSQ CEYRYHVKCI SGKVVCNQRS GLGTWFCERR CQQIYTSMRS RVGMPDHLDD GFSCTILRNN DDQKVHSASD IALLAECSMK LIIALSILEE
1301: CFLPIFDPRT GVDIMPPIVY NWRSDFVHLD CKGFYTVVLE KDDNLLSVAS IRLHGTTVAE MPLIATCSEN RQQGMCRQLV DYIEEMLKSL EVEMLLLFAI
1401: PNLVDTWTSA FGFRPIEDCD KKKLSKIRLV SIPGTVLLKK DLYERSSETG AGALRTEQPQ PLADTGPVCT AETNLADEVG GLETNPPRAD PPSAVALGKC
1501: HVD
0101: SANQQMQNAM PCTDHHGRPS ECELVVQETP PSGDRVYTRR AVIRRSQRAK QCSILGWERV DINSVVAQRR DGRGGFGMLW NHLRLHAHLL MMDAGWKIEG
0201: KERGDKSKVD LMFESPDKEI RLASLPKAWK CFGQWLLIHS SRFDGNYYGK EWFNMYEFCY DLKNTLLCLE HEVRRPKQSL SFLHQWQLLD PFMAVVCIDK
0301: KVAALRNGVA LKAVNSRVTI LNCSDIKLLS RLSRRNVNKP VAIKYSSNYS DTHPKSRRSL LPLLLSDGQP HKEENSLHNE QSFMFGTSKH SQYEVQQRYL
0401: TMQEMNERSV RNIPHHIVKG FQDATEHSSM PTCFSTKREF PYCKMVQDTR DESDPPYFPP SYASDQLVEN VQIKVPSSHA GEAMEIAADM GNSADSPSDK
0501: LLIRPDLLFS HEVDEMILGT TDGVSNEHHA AAVVSDYQAG TEDGRGGPSS GTLSLPEEKD ARLEAIRDDV NNEHDIVVPG FQAGNVHVRD EPSAGALSLL
0601: AEKDTPLEVI RDDINNEHDV VVVPGFQVGN DDVRGGPSSG TLSLLKAKGT NLEAKDMSLE QMTKTGWVPS GATGGPLKIS EPQVLFVSPQ DGRLSFMNNS
0701: TFNQDTLSCL NFSHDSMGAN MQLEIQTSAY EASLIQGFLY LDSEGSPIGW EVINPEPPNQ LICGPSSEPN SKVSGHCGEL NMQNEALTSE QREISESDPS
0801: KNGQKRCEKV AGIKDDVRRK KQKVNSVHAS HCAIGKNMDI TTEVPASFVV HNGKEQIGAT SSEHASSNHK RSQDAADIQD EVREKKQKVN DGLISDSIIG
0901: QCMDSSTTEN PTRCVTHCEE VQISASSHEQ VSLTLVPEIK EHKEQAEDSS EPPKQLVSEQ PPKKDVKFRK KQPWTRKCRF DEDDLLMTAV IHRLTARYRN
1001: HYNRMLINRI GLKSLPRSRL ENEKKCGRQK FPKSARTVLS KLLEMGIVCT MNILQYRRPG PKNVLKDGNI TEHGIRCRCC DTIFTMSNFR CHAGLKQETL
1101: TLNLFLGSGK SYSLCQLQAW FIEQKKRKER AKDTMSVQAD ENDDTCGLCG DVGELICCDN CPASYHQACL PCQEVPDGNW YCSSCLCNVC GEVVNSKAPG
1201: GLLHALECSQ CEYRYHVKCI SGKVVCNQRS GLGTWFCERR CQQIYTSMRS RVGMPDHLDD GFSCTILRNN DDQKVHSASD IALLAECSMK LIIALSILEE
1301: CFLPIFDPRT GVDIMPPIVY NWRSDFVHLD CKGFYTVVLE KDDNLLSVAS IRLHGTTVAE MPLIATCSEN RQQGMCRQLV DYIEEMLKSL EVEMLLLFAI
1401: PNLVDTWTSA FGFRPIEDCD KKKLSKIRLV SIPGTVLLKK DLYERSSETG AGALRTEQPQ PLADTGPVCT AETNLADEVG GLETNPPRAD PPSAVALGKC
1501: HVD
0001: MLPGAEIEML GGDCFEGSYE DHQIFREVFF GSDPGNTTKR CLVTGAINFE CDSSKNVNSS LSSNSVVTSG YACPQGFEAS ASRDGSDFNT KAKRVKLSGN
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
0101: KHLDARDEKG SALHGFPTSD IARETIPLHL VESSNKGVST SSYLLKHSIV KGREVYLGGI VSGKCKSLNL DKCDGKEFKA IASPVSQESF ATRMISVGAS
0201: TPHSEKACFP LQLNNGSKVS PNELIMSKTC LKIDPKEDPR PLLYKYVCKV LTAARWKIEK RERSAGRKHV DTFYISPEGR KFREFGSAWK ALGGILLADR
0301: KLMDTGTKKW TGINDFWSDL SLTLLDIEEN MKNLNLANTR ALWWSALEPF VVVVFISKQV GSLRKGNKVE VARNSNPDKL KKEDTICLNL ISGCPESVLT
0401: VSEGSHLVHD VDANQEIHSD LEVQTKISSQ KVSSRLERQS IIGKEISGTH EQEASKGIVA SKLIAEDMHE SVMRKNLHRR SKKISDIKPA SLDQHDSLDS
0501: NSLNSFEFQD KEMGNIHLVS KGSRDERLRN EKMNNSCCNS KKGRKKARKH YTQDDDLMGS TITRNKGKFS RSSQKKKTQK PKARTKKRNN RGGCRLLPRS
0601: SSNVENHFFQ GNWSILGPRT VLSWLIATKV ISRDEVIQLR DPDDDTVVKT GLVTKDGVVC TCCNKTVSLS EFKNHAGFNQ NCPCLNLFMG SGKPFASCQL
0701: EAWSAEYKAR RNGWRLEKAS DDDPNDDSCG VCGDGGELIC CDNCPSTFHQ ACLSMQVLPE GSWYCSSCTC WICSELVSDN AERSQDFKCS QCAHKYHGTC
0801: LQGISKRRKL FPETYFCGKN CEKVYNGLSS RVGIINPNAD GLSWSILKCF QEDGMVHSAR RLALKAECNS KLAVALSIME ESFLSMVDPR TGIDMIPHVL
0901: YNWGSTFARL DFDGFYTVVV EKDDVMISVA SIRVHGVTIA EMPLVATCSK YRRQGMCRIL VAAIEEMLMS LKVEKLVVAA LPSLVETWTE GFGFKPMDDE
1001: ERDALKRINL MVFPGTTLLK KTLYESTKPS TMKGVCLSKE RNNPSNKEAD LEPGLDKAGS PMSTQVESCD QMVPAGSDDE PSPGFPVPLG ADQTEPTSET
1101: ENPSRDSNAN DRPNKTTVVS IGEEEEEECL QKDVSKLSEE GKETTRASSS SAALEEVSGL GLGVVNNVSD EMLLCVDEQL DSDSSQDSE
Arabidopsis Description
IDM1Increased DNA methylation 1 [Source:UniProtKB/Swiss-Prot;Acc:F4IXE7]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.